Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= brS-1255
(664 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPAC9E9.07c |ypt2||GTPase Ypt2 |Schizosaccharomyces pombe|chr 1|... 256 3e-69
SPBC1703.10 |ypt1||GTPase Ypt1|Schizosaccharomyces pombe|chr 2||... 214 1e-56
SPAC18G6.03 |ypt3||GTPase Ypt3|Schizosaccharomyces pombe|chr 1||... 199 3e-52
SPAC4C5.02c |ryh1|hos1|GTPase Ryh1|Schizosaccharomyces pombe|chr... 152 5e-38
SPAC1B3.11c |ypt4||GTPase Ypt4|Schizosaccharomyces pombe|chr 1||... 141 7e-35
SPBC405.04c |ypt7||GTPase Ypt7|Schizosaccharomyces pombe|chr 2||... 132 4e-32
SPAC6F6.15 |ypt5||GTPase Ypt5|Schizosaccharomyces pombe|chr 1|||... 132 6e-32
SPAC17H9.09c |ras1|ste5|GTPase Ras1|Schizosaccharomyces pombe|ch... 123 3e-29
SPAPB1A10.10c |ypt71||GTPase Ypt71|Schizosaccharomyces pombe|chr... 117 2e-27
SPBC428.16c |rhb1||Rheb GTPase Rhb1|Schizosaccharomyces pombe|ch... 93 3e-20
SPBC1289.03c |spi1||Ran GTPase Spi1|Schizosaccharomyces pombe|ch... 88 9e-19
SPAC23C4.08 |rho3||Rho family GTPase Rho3|Schizosaccharomyces po... 78 1e-15
SPAC20H4.11c |rho5||Rho family GTPase Rho5|Schizosaccharomyces p... 77 2e-15
SPAC1565.06c |spg1|sid3|GTPase Spg1|Schizosaccharomyces pombe|ch... 75 7e-15
SPAC1F7.04 |rho1||Rho family GTPase Rho1|Schizosaccharomyces pom... 75 1e-14
SPAC16.01 |rho2||Rho family GTPase Rho2|Schizosaccharomyces pomb... 69 8e-13
SPAC110.03 |cdc42||Rho family GTPase Cdc42|Schizosaccharomyces p... 66 6e-12
SPAC16A10.04 |rho4||Rho family GTPase Rho4|Schizosaccharomyces p... 65 1e-11
SPAC22F3.05c |alp41||ADP-ribosylation factor Alp41|Schizosacchar... 62 9e-11
SPBC1539.08 |||ADP-ribosylation factor, Arf family|Schizosacchar... 60 4e-10
SPBC4F6.18c |arf1||ADP-ribosylation factor Arf1|Schizosaccharomy... 57 3e-09
SPCC320.04c |||GTPase Gem1 |Schizosaccharomyces pombe|chr 3|||Ma... 38 0.001
SPBC21D10.06c |map4||cell agglutination protein Map4|Schizosacch... 30 0.34
SPBC342.01c |alg6|SPBC3F6.06c|glucosyltransferase Alg6|Schizosac... 29 0.79
SPBC337.13c |gtr1||Gtr1/RagA G protein Gtr1|Schizosaccharomyces ... 29 0.79
SPAC11D3.15 |||oxoprolinase |Schizosaccharomyces pombe|chr 1|||M... 27 2.4
SPAC27D7.08c |||DUF890 family protein|Schizosaccharomyces pombe|... 26 4.2
SPAC19D5.04 |ptr1||HECT domain|Schizosaccharomyces pombe|chr 1||... 26 4.2
SPAC31A2.12 |||arrestin/PY protein 1|Schizosaccharomyces pombe|c... 26 4.2
SPAC9G1.11c |spn4||septin Spn4|Schizosaccharomyces pombe|chr 1||... 26 5.6
SPBC83.07 |jmj3||Lid2 complex subunit Jmj3|Schizosaccharomyces p... 26 5.6
SPBC25B2.01 ||SPBC2G5.08|elongation factor 1 alpha related prote... 26 5.6
SPAC23A1.05 |||sequence orphan|Schizosaccharomyces pombe|chr 1||... 25 9.7
>SPAC9E9.07c |ypt2||GTPase Ypt2 |Schizosaccharomyces pombe|chr
1|||Manual
Length = 200
Score = 256 bits (626), Expect = 3e-69
Identities = 118/180 (65%), Positives = 154/180 (85%), Gaps = 1/180 (0%)
Frame = +3
Query: 66 KTYDCLFKLLLIGDSGVGKTSILFRFSEDAFNISFISTIGIDFKIRTIDLDGKKVKLQIW 245
K+YD L KLLLIGDSGVGK+ +L RFSED+F SFI+TIGIDFKIRTI+LDGK++KLQIW
Sbjct: 4 KSYDYLIKLLLIGDSGVGKSCLLLRFSEDSFTPSFITTIGIDFKIRTIELDGKRIKLQIW 63
Query: 246 DTAGQERFRTITTAYYRGSMGIMLVYDVTNEKSFENIKNWIRNIEENASADVEKMILGNK 425
DTAGQERFRTITTAYYRG+MGI+L+YDVT++KSF+N++ W N+E++AS +V K+++GNK
Sbjct: 64 DTAGQERFRTITTAYYRGAMGILLLYDVTDKKSFDNVRTWFSNVEQHASENVYKILIGNK 123
Query: 426 CDLDSQRQVSKERGEQLAIEYQIKFVETSAKDSLNVEYAFYTLARDI-KAKMEKKQEASN 602
CD + QRQVS E+G+ LA E +KF+E SAK ++NV+ AF+TLAR+I K K++ + E SN
Sbjct: 124 CDCEDQRQVSFEQGQALADELGVKFLEASAKTNVNVDEAFFTLAREIKKQKIDAENEFSN 183
>SPBC1703.10 |ypt1||GTPase Ypt1|Schizosaccharomyces pombe|chr
2|||Manual
Length = 203
Score = 214 bits (522), Expect = 1e-56
Identities = 100/181 (55%), Positives = 134/181 (74%)
Frame = +3
Query: 60 MAKTYDCLFKLLLIGDSGVGKTSILFRFSEDAFNISFISTIGIDFKIRTIDLDGKKVKLQ 239
M YD LFKLLLIGDSGVGK+ +L RF++D + S+ISTIG+DFKIRT +L+GK VKLQ
Sbjct: 1 MNPEYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTFELEGKTVKLQ 60
Query: 240 IWDTAGQERFRTITTAYYRGSMGIMLVYDVTNEKSFENIKNWIRNIEENASADVEKMILG 419
IWDTAGQERFRTIT++YYRG+ GI++VYDVT++ SF N+K W++ I+ A V ++++G
Sbjct: 61 IWDTAGQERFRTITSSYYRGAHGIIIVYDVTDQDSFNNVKQWLQEIDRYAVEGVNRLLVG 120
Query: 420 NKCDLDSQRQVSKERGEQLAIEYQIKFVETSAKDSLNVEYAFYTLARDIKAKMEKKQEAS 599
NK D+ ++ V ++ A I F+ETSAKDS NVE AF T++R IK +M AS
Sbjct: 121 NKSDMVDKKVVEYSVAKEFADSLNIPFLETSAKDSTNVEQAFLTMSRQIKERMGNNTFAS 180
Query: 600 N 602
+
Sbjct: 181 S 181
>SPAC18G6.03 |ypt3||GTPase Ypt3|Schizosaccharomyces pombe|chr
1|||Manual
Length = 214
Score = 199 bits (485), Expect = 3e-52
Identities = 94/200 (47%), Positives = 135/200 (67%), Gaps = 5/200 (2%)
Frame = +3
Query: 72 YDCLFKLLLIGDSGVGKTSILFRFSEDAFNISFISTIGIDFKIRTIDLDGKKVKLQIWDT 251
YD LFK +LIGDSGVGK+++L RF+ + FNI STIG++F R I LD KK+K QIWDT
Sbjct: 7 YDYLFKTVLIGDSGVGKSNLLMRFTRNEFNIESKSTIGVEFATRNIVLDNKKIKAQIWDT 66
Query: 252 AGQERFRTITTAYYRGSMGIMLVYDVTNEKSFENIKNWIRNIEENASADVEKMILGNKCD 431
AGQER+R IT+AYYRG++G ++VYD+T + SF+N+ W++ + E+A +++ M++GNK D
Sbjct: 67 AGQERYRAITSAYYRGAVGALIVYDITKQSSFDNVGRWLKELREHADSNIVIMLVGNKTD 126
Query: 432 LDSQRQVSKERGEQLAIEYQIKFVETSAKDSLNVEYAFYTLARDI-----KAKMEKKQEA 596
L R VS E + A E + F+ETSA D+ NVE AF T+ +I +E +
Sbjct: 127 LLHLRAVSTEEAQAFAAENNLSFIETSAMDASNVEEAFQTVLTEIFRIVSNRSLEAGDDG 186
Query: 597 SNPSGGRSGVHKPTLNDARK 656
+P+ G++ PT+ND K
Sbjct: 187 VHPTAGQTLNIAPTMNDLNK 206
>SPAC4C5.02c |ryh1|hos1|GTPase Ryh1|Schizosaccharomyces pombe|chr
1|||Manual
Length = 201
Score = 152 bits (368), Expect = 5e-38
Identities = 72/159 (45%), Positives = 108/159 (67%)
Frame = +3
Query: 84 FKLLLIGDSGVGKTSILFRFSEDAFNISFISTIGIDFKIRTIDLDGKKVKLQIWDTAGQE 263
FKL+ +G+ VGKTS++ RF D F+ ++ +TIGIDF +T+ L+ + V+LQ+WDTAGQE
Sbjct: 12 FKLVFLGEQSVGKTSLITRFMYDQFDNTYQATIGIDFLSKTMYLEDRTVRLQLWDTAGQE 71
Query: 264 RFRTITTAYYRGSMGIMLVYDVTNEKSFENIKNWIRNIEENASADVEKMILGNKCDLDSQ 443
RFR++ +Y R S ++VYD+TN SF N + WI ++ DV +++GNK DL +
Sbjct: 72 RFRSLIPSYIRDSSVAIIVYDITNHNSFVNTEKWIEDVRAERGDDVIIVLVGNKTDLADK 131
Query: 444 RQVSKERGEQLAIEYQIKFVETSAKDSLNVEYAFYTLAR 560
RQV++E GE+ A E +I +ETSAK NV+ F +A+
Sbjct: 132 RQVTQEEGEKKAKELKIMHMETSAKAGHNVKLLFRKIAQ 170
>SPAC1B3.11c |ypt4||GTPase Ypt4|Schizosaccharomyces pombe|chr
1|||Manual
Length = 234
Score = 141 bits (342), Expect = 7e-35
Identities = 73/177 (41%), Positives = 109/177 (61%), Gaps = 5/177 (2%)
Frame = +3
Query: 66 KTYDCLFKLLLIGDSGVGKTSILFRFSEDAFNISFISTIGIDFKIRTIDL----DGKKVK 233
++YD L K++L G SG GK+ +L RF ++ ++ T+GIDF R I + K++K
Sbjct: 4 ESYDYLVKIVLAGPSGTGKSCLLQRFVKNQWDDQVSHTVGIDFASRIISVGMGNQQKRIK 63
Query: 234 LQIWDTAGQERFRTITTAYYRGSMGIMLVYDVTNEKSFENIKNWIRNIEENASADVEKMI 413
LQIWDTAGQE+FR++ YYRG+ G +LVYDVTN+ SFE + +W+ +I A + + ++
Sbjct: 64 LQIWDTAGQEKFRSVARNYYRGAAGAVLVYDVTNKDSFEELSSWLSDIRAMAPSTICVVL 123
Query: 414 LGNKCDLDSQRQVSKERGEQLAIEYQIKFV-ETSAKDSLNVEYAFYTLARDIKAKME 581
G+K DL +QRQVS E + E I ETS+ NVE F ++ I ++E
Sbjct: 124 AGSKSDLQNQRQVSTEEAAEFCSEKHISSAHETSSYTGSNVEECFLSVVSTIITRIE 180
>SPBC405.04c |ypt7||GTPase Ypt7|Schizosaccharomyces pombe|chr
2|||Manual
Length = 205
Score = 132 bits (319), Expect = 4e-32
Identities = 72/180 (40%), Positives = 112/180 (62%), Gaps = 6/180 (3%)
Frame = +3
Query: 81 LFKLLLIGDSGVGKTSILFRFSEDAFNISFISTIGIDFKIRTIDLDGKKVKLQIWDTAGQ 260
L K++++G+SGVGKTSI+ ++ F+ + +TIG DF + + +D K V LQ+WDTAGQ
Sbjct: 8 LLKVIILGESGVGKTSIMNQYVNRKFSKDYKATIGADFLTKEVLVDDKVVTLQLWDTAGQ 67
Query: 261 ERFRTITTAYYRGSMGIMLVYDVTNEKSFENIKNWIRNIEENASADVEK----MILGNKC 428
ERF+++ A+YRG+ +LVYDV N KSFE + +W AS + ++LGNK
Sbjct: 68 ERFQSLGVAFYRGADCCVLVYDVNNSKSFETLDSWRDEFLIQASPSNPETFPFILLGNKV 127
Query: 429 DLDSQ-RQVSKERGEQLA-IEYQIKFVETSAKDSLNVEYAFYTLARDIKAKMEKKQEASN 602
D++ Q R VSK + +I + ETSAK+++NV+ AF T+A+ M+ A++
Sbjct: 128 DVEEQKRMVSKSKALAFCQARGEIPYFETSAKEAINVQEAFETVAKLALENMDSDDIAAD 187
>SPAC6F6.15 |ypt5||GTPase Ypt5|Schizosaccharomyces pombe|chr
1|||Manual
Length = 211
Score = 132 bits (318), Expect = 6e-32
Identities = 75/193 (38%), Positives = 111/193 (57%), Gaps = 2/193 (1%)
Frame = +3
Query: 87 KLLLIGDSGVGKTSILFRFSEDAFNISFISTIGIDFKIRTIDLD-GKKVKLQIWDTAGQE 263
KL+L+GDS VGK+S++ RF +D F+ STIG F +T+ +D VKL+IWDTAGQE
Sbjct: 16 KLVLLGDSAVGKSSLVLRFVKDQFDDYRESTIGAAFLTQTLPIDENTSVKLEIWDTAGQE 75
Query: 264 RFRTITTAYYRGSMGIMLVYDVTNEKSFENIKNWIRNIEENASADVEKMILGNKCDLDSQ 443
R++++ YYR + ++VYD+T S E K+WI+ ++ A + + GNK DL +
Sbjct: 76 RYKSLAPMYYRNANCAIVVYDITQAASLEKAKSWIKELQRQAPEGIVIALAGNKLDLAQE 135
Query: 444 RQ-VSKERGEQLAIEYQIKFVETSAKDSLNVEYAFYTLARDIKAKMEKKQEASNPSGGRS 620
R+ V K E A E + F ETSAK + NV F +A+ K +E K + + R
Sbjct: 136 RRAVEKADAEAYAAEANLLFFETSAKTAENVNELFTAIAK--KLPLEDKLNQARGAVNR- 192
Query: 621 GVHKPTLNDARKP 659
GV+ A +P
Sbjct: 193 GVNLSEARPAAQP 205
>SPAC17H9.09c |ras1|ste5|GTPase Ras1|Schizosaccharomyces pombe|chr
1|||Manual
Length = 219
Score = 123 bits (296), Expect = 3e-29
Identities = 67/179 (37%), Positives = 104/179 (58%), Gaps = 1/179 (0%)
Frame = +3
Query: 60 MAKTYDCLFKLLLIGDSGVGKTSILFRFSEDAFNISFISTIGIDFKIRTIDLDGKKVKLQ 239
M TY +KL+++GD GVGK+++ + + F + TI ++ + ++DG+ L
Sbjct: 1 MRSTYLREYKLVVVGDGGVGKSALTIQLIQSHFVDEYDPTIEDSYR-KKCEIDGEGALLD 59
Query: 240 IWDTAGQERFRTITTAYYRGSMGIMLVYDVTNEKSFENIKNWIRNIEENASADVEKMIL- 416
+ DTAGQE + + Y R G +LVY++T+ SF+ I + + I D ++L
Sbjct: 60 VLDTAGQEEYSAMREQYMRTGEGFLLVYNITSRSSFDEISTFYQQILRVKDKDTFPVVLV 119
Query: 417 GNKCDLDSQRQVSKERGEQLAIEYQIKFVETSAKDSLNVEYAFYTLARDIKAKMEKKQE 593
NKCDL+++R VS+ GEQLA +VETSAK LNVE AFY+L R I+ + K +E
Sbjct: 120 ANKCDLEAERVVSRAEGEQLAKSMHCLYVETSAKLRLNVEEAFYSLVRTIR-RYNKSEE 177
>SPAPB1A10.10c |ypt71||GTPase Ypt71|Schizosaccharomyces pombe|chr
1|||Manual
Length = 208
Score = 117 bits (281), Expect = 2e-27
Identities = 64/165 (38%), Positives = 103/165 (62%), Gaps = 7/165 (4%)
Frame = +3
Query: 87 KLLLIGDSGVGKTSILFRFSEDAFNISFISTIGIDFKIRTIDLDGKKVKLQIWDTAGQER 266
K++++GDSGVGKT ++ +F F+ + +TIG DF + + +D K V LQ+WDTAGQER
Sbjct: 10 KVVILGDSGVGKTCLMNQFVNQKFSREYKATIGADFLTKDVVVDDKLVTLQLWDTAGQER 69
Query: 267 FRTITTAYYRGSMGIMLVYDVTNEKSFENIKNWIRNIEENASAD---VEKMILGNKCDLD 437
F+++ A+YRG+ ++VY+V N KSF++++NW + S D +I+GN+ D D
Sbjct: 70 FQSLGMAFYRGADCCVIVYNVNNSKSFDSVENWRQEFLYQTSQDECAFPFIIVGNQIDKD 129
Query: 438 -SQRQVSKERG-EQLAIEYQIKFV--ETSAKDSLNVEYAFYTLAR 560
S+R VS R + ++ + E SAK++ NV F T++R
Sbjct: 130 ASKRAVSLHRALDYCKSKHGSNMIHFEASAKENTNVTDLFETVSR 174
>SPBC428.16c |rhb1||Rheb GTPase Rhb1|Schizosaccharomyces pombe|chr
2|||Manual
Length = 185
Score = 93.1 bits (221), Expect = 3e-20
Identities = 58/181 (32%), Positives = 98/181 (54%), Gaps = 1/181 (0%)
Frame = +3
Query: 87 KLLLIGDSGVGKTSILFRFSEDAFNISFISTIGIDFKIRTIDLDGKKVKLQIWDTAGQER 266
++ ++G VGK+S+ ++ E+ F S+ TI F + I G++ +I DTAGQ+
Sbjct: 8 RIAVLGSRSVGKSSLTVQYVENHFVESYYPTIENTFS-KNIKYKGQEFATEIIDTAGQDE 66
Query: 267 FRTITTAYYRGSMGIMLVYDVTNEKSFENIKNWIRNIEENASAD-VEKMILGNKCDLDSQ 443
+ + + + G G +LVY +T++ SFE +K I + + V +++GNK DL Q
Sbjct: 67 YSILNSKHSIGIHGYVLVYSITSKSSFEMVKIVRDKILNHTGTEWVPIVVVGNKSDLHMQ 126
Query: 444 RQVSKERGEQLAIEYQIKFVETSAKDSLNVEYAFYTLARDIKAKMEKKQEASNPSGGRSG 623
R V+ E G+ LA E++ + E SA+ + NV AF + +I EK+ S P G+
Sbjct: 127 RAVTAEEGKALANEWKCAWTEASARHNENVARAFELIISEI----EKQANPSPPGDGKGC 182
Query: 624 V 626
V
Sbjct: 183 V 183
>SPBC1289.03c |spi1||Ran GTPase Spi1|Schizosaccharomyces pombe|chr
2|||Manual
Length = 216
Score = 88.2 bits (209), Expect = 9e-19
Identities = 49/162 (30%), Positives = 91/162 (56%), Gaps = 1/162 (0%)
Frame = +3
Query: 84 FKLLLIGDSGVGKTSILFRFSEDAFNISFISTIGIDFKIRTIDLDGKKVKLQIWDTAGQE 263
FKL+L+GD G GKT+ + R F +I+T+G++ + ++ +WDTAGQE
Sbjct: 10 FKLVLVGDGGTGKTTFVKRHLTGEFEKKYIATLGVEVHPLHFHTNFGEICFNVWDTAGQE 69
Query: 264 RFRTITTAYY-RGSMGIMLVYDVTNEKSFENIKNWIRNIEENASADVEKMILGNKCDLDS 440
+ + YY +G GI +++DVT+ +++N+ +W R++ ++ ++ GNK D+
Sbjct: 70 KLGGLRDGYYIQGQCGI-IMFDVTSRITYKNVPHWWRDL-VRVCENIPIVLCGNKVDV-K 126
Query: 441 QRQVSKERGEQLAIEYQIKFVETSAKDSLNVEYAFYTLARDI 566
+R+V K + + +++ + SAK + N E F LAR +
Sbjct: 127 ERKV-KAKAITFHRKKNLQYYDISAKSNYNFEKPFLWLARKL 167
>SPAC23C4.08 |rho3||Rho family GTPase Rho3|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 205
Score = 77.8 bits (183), Expect = 1e-15
Identities = 52/168 (30%), Positives = 87/168 (51%), Gaps = 10/168 (5%)
Frame = +3
Query: 87 KLLLIGDSGVGKTSILFRFSEDAFNISFISTIGIDFKIRTIDLDGKKVKLQIWDTAGQER 266
K++++GD GKTS+L F++ F + TI ++ I I +DG ++L +WDTAGQE
Sbjct: 15 KIVILGDGAAGKTSLLNVFTKGYFPQVYEPTIFENY-IHDIFVDGNSIELSLWDTAGQEE 73
Query: 267 FRTITTAYYRGSMGIMLVYDVTNEKSFEN-IKNWIRNIEENASADVEKMILGNKCDL--- 434
+ + + Y + IM+ + V + S EN I W+ + N V+ +++ KCDL
Sbjct: 74 YDQLRSLSYSDTHVIMICFAVDSRDSLENVITKWLPEVSSNCPG-VKLVLVALKCDLRGA 132
Query: 435 -----DSQRQVSKERGEQLAIEYQ-IKFVETSAKDSLNVEYAFYTLAR 560
D + + E G A + ++++E SAK + V AF AR
Sbjct: 133 DEEQVDHSKIIDYEEGLAAAKKINAVRYLECSAKLNRGVNEAFTEAAR 180
>SPAC20H4.11c |rho5||Rho family GTPase Rho5|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 200
Score = 77.4 bits (182), Expect = 2e-15
Identities = 55/187 (29%), Positives = 99/187 (52%), Gaps = 14/187 (7%)
Frame = +3
Query: 87 KLLLIGDSGVGKTSILFRFSEDAFNISFISTIGIDFKIRTIDLDGKKVKLQIWDTAGQER 266
KL+++GD GKT +L FS+ F ++ T+ ++ + +++DG+ ++L +WDTAGQE
Sbjct: 8 KLVIVGDGACGKTCLLIVFSKGTFPEVYVPTVFENY-VADVEVDGRHIELALWDTAGQED 66
Query: 267 FRTITTAYYRGSMGIMLVYDVTNEKSFENI-KNWIRNIEENASADVEKMILGNKCDL--- 434
+ + Y S +++ + V +S +N+ + WI + S ++ +++G K DL
Sbjct: 67 YDRLRPLSYPDSHVVLICFSVDAPESLDNVQEKWISEVLHFCS-NLPILLVGCKVDLRND 125
Query: 435 ---------DSQRQVSKERGEQLAIEY-QIKFVETSAKDSLNVEYAFYTLARDIKAKMEK 584
SQ+ ++ E G+ +A + K++E SAK + V F T AR A M K
Sbjct: 126 PKTIEELSKTSQKPITFEEGQVVAQKIGAYKYLECSAKLNEGVNEVFETAAR---ASMLK 182
Query: 585 KQEASNP 605
+ AS P
Sbjct: 183 FKPASVP 189
>SPAC1565.06c |spg1|sid3|GTPase Spg1|Schizosaccharomyces pombe|chr
1|||Manual
Length = 198
Score = 75.4 bits (177), Expect = 7e-15
Identities = 45/190 (23%), Positives = 93/190 (48%), Gaps = 9/190 (4%)
Frame = +3
Query: 63 AKTYDCLFKLLLIGDSGVGKTSILFRFSEDAFNISFISTIGIDFKIRTIDLDGKKVKLQI 242
A+ + K+ +IGDS +GKTS++ + + +F+ T+G++F +TI + ++ I
Sbjct: 4 ARKNNVTIKVGMIGDSSIGKTSLMVTYVQGSFDEESTQTLGVNFMEKTISIRNTEITFSI 63
Query: 243 WDTAGQERFRTITTAYYRGSMGIMLVYDVTNEKSFENIKNWIRNIEENASADVEKMILGN 422
WD GQ F + ++ I+ ++D++ + + +IK W R + +++G
Sbjct: 64 WDLGGQREFVNMLPMVCNDAVAILFMFDLSRKSTLNSIKEWYRQ-ARGFNKTAVPILIGT 122
Query: 423 KCD------LDSQRQVSKERGEQLAIEYQIKFVETSAKDSLNVEYAF-YTLAR--DIKAK 575
K D + Q +++K+ + A + V S S+NV+ F LA+ D+K
Sbjct: 123 KYDHFMTFPREDQEEITKQ-ARRYAKAMKASLVFCSTSHSINVQKIFKIVLAKVFDLKCT 181
Query: 576 MEKKQEASNP 605
+ + + +P
Sbjct: 182 IPEIKNVGDP 191
>SPAC1F7.04 |rho1||Rho family GTPase Rho1|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 202
Score = 74.5 bits (175), Expect = 1e-14
Identities = 54/190 (28%), Positives = 96/190 (50%), Gaps = 14/190 (7%)
Frame = +3
Query: 87 KLLLIGDSGVGKTSILFRFSEDAFNISFISTIGIDFKIRTIDLDGKKVKLQIWDTAGQER 266
KL+++GD GKT +L FS+ F ++ T+ ++ + +++DG+ V+L +WDTAGQE
Sbjct: 8 KLVIVGDGACGKTCLLIVFSKGTFPEVYVPTVFENY-VADVEVDGRHVELALWDTAGQED 66
Query: 267 FRTITTAYYRGSMGIMLVYDVTNEKSFENI-KNWIRNIEENASADVEKMILGNKCDL--- 434
+ + Y S I++ + V + S +N+ + WI + S+ + +++ K DL
Sbjct: 67 YDRLRPLSYPDSHVILICFAVDSPDSLDNVQEKWISEVLHFCSS-LPILLVACKADLRND 125
Query: 435 ---------DSQRQVSKERGEQLAIEY-QIKFVETSAKDSLNVEYAFYTLARDIKAKMEK 584
+Q V+ E G+ +A + K++E SAK + V F + R A M K
Sbjct: 126 PKIIEELSKTNQHPVTTEEGQAVAQKIGAYKYLECSAKTNEGVREVFESATR---AAMLK 182
Query: 585 KQEASNPSGG 614
+ PS G
Sbjct: 183 HKPKVKPSSG 192
>SPAC16.01 |rho2||Rho family GTPase Rho2|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 200
Score = 68.5 bits (160), Expect = 8e-13
Identities = 38/119 (31%), Positives = 65/119 (54%), Gaps = 1/119 (0%)
Frame = +3
Query: 87 KLLLIGDSGVGKTSILFRFSEDAFNISFISTIGIDFKIRTIDLDGKKVKLQIWDTAGQER 266
KL+++GD GKTS+L F+ F ++ T+ ++ + +DGK V+L +WDTAGQE
Sbjct: 10 KLVVVGDGACGKTSLLSVFTLGYFPTEYVPTVFENY-VSDCRVDGKSVQLALWDTAGQEE 68
Query: 267 FRTITTAYYRGSMGIMLVYDVTNEKSFENIK-NWIRNIEENASADVEKMILGNKCDLDS 440
+ + Y + I++ + + + S EN+ WI I +V +++G K DL S
Sbjct: 69 YERLRPMSYAKAHIILVGFAIDSPDSLENVSTKWIEEI-NTLCPNVPFILVGMKADLRS 126
>SPAC110.03 |cdc42||Rho family GTPase Cdc42|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 192
Score = 65.7 bits (153), Expect = 6e-12
Identities = 45/167 (26%), Positives = 84/167 (50%), Gaps = 14/167 (8%)
Frame = +3
Query: 87 KLLLIGDSGVGKTSILFRFSEDAFNISFISTIGIDFKIRTIDLDGKKVKLQIWDTAGQER 266
K +++GD VGKT +L ++ + F ++ T+ ++ + T+ + + L ++DTAGQE
Sbjct: 5 KCVVVGDGAVGKTCLLISYTTNKFPSDYVPTVFDNYAV-TVMIGDEPYTLGLFDTAGQED 63
Query: 267 FRTITTAYYRGSMGIMLVYDVTNEKSFENIK-NWIRNIEENASADVEKMILGNKCDL--- 434
+ + Y + ++ + VT+ SFEN+K W + + V +I+G + DL
Sbjct: 64 YDRLRPLSYPQTDVFLVCFSVTSPASFENVKEKWFPEVHHHCPG-VPCLIVGTQIDLRDD 122
Query: 435 ---------DSQRQVSKERGEQLAIEY-QIKFVETSAKDSLNVEYAF 545
Q ++ E+GE+LA E +K+VE SA ++ F
Sbjct: 123 PSVQQKLARQHQHPLTHEQGERLARELGAVKYVECSALTQKGLKNVF 169
>SPAC16A10.04 |rho4||Rho family GTPase Rho4|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 203
Score = 64.9 bits (151), Expect = 1e-11
Identities = 44/167 (26%), Positives = 79/167 (47%), Gaps = 14/167 (8%)
Frame = +3
Query: 87 KLLLIGDSGVGKTSILFRFSEDAFNISFISTIGIDFKIR-TIDLDGKKVKLQIWDTAGQE 263
KL+++GD G GKT +L FS F ++ T+ ++ T + K ++L +WDTAGQE
Sbjct: 16 KLVVVGDGGCGKTCLLIVFSSGTFPERYVPTVFENYITDITYGPNSKVIELALWDTAGQE 75
Query: 264 RFRTITTAYYRGSMGIMLVYDVTNEKSFENI-KNWIRNIEENASADVEKMILGNKCDLDS 440
+ + Y S I+L + + S N+ + W + ++ +++G K DL
Sbjct: 76 EYDRLRPLSYPNSNVILLCFSIDCPASLNNVTEKWYPEV-QHFCPRTPIVLVGLKADLRK 134
Query: 441 QRQ------------VSKERGEQLAIEYQIKFVETSAKDSLNVEYAF 545
R V+ ++ + +A+ +VE SAK++ V F
Sbjct: 135 DRNATEVLRTQGLTPVTYQQAQSVALSMNAPYVECSAKENTGVNEVF 181
>SPAC22F3.05c |alp41||ADP-ribosylation factor
Alp41|Schizosaccharomyces pombe|chr 1|||Manual
Length = 186
Score = 61.7 bits (143), Expect = 9e-11
Identities = 48/178 (26%), Positives = 84/178 (47%), Gaps = 5/178 (2%)
Frame = +3
Query: 51 VVKMAKTYDCLFKLLLIGDSGVGKTSIL-FRFSEDAFNISFISTIGIDFKIRTIDLDGKK 227
+++ K + ++LL+G GKT+IL +ED +S T G F+IRT++++G
Sbjct: 6 ILRQQKLKEREVRVLLLGLDNAGKTTILKCLLNEDVNEVS--PTFG--FQIRTLEVEG-- 59
Query: 228 VKLQIWDTAGQERFRTITTAYYRGSMGIMLVYDVTNEKSFENIKNWIRN-IEENASADVE 404
++ IWD GQ+ R Y+ + I+ V D ++ E +N ++ + E
Sbjct: 60 LRFTIWDIGGQKTLRNFWKNYFESTEAIIWVVDSLDDLRLEECRNTLQELLVEEKLLFTS 119
Query: 405 KMILGNKCDLD---SQRQVSKERGEQLAIEYQIKFVETSAKDSLNVEYAFYTLARDIK 569
++L NK D+ S ++SK + SA LN++ A LA D+K
Sbjct: 120 ILVLANKSDVSGALSSEEISKILNISKYKSSHWRIFSVSALTGLNIKDAISWLANDLK 177
>SPBC1539.08 |||ADP-ribosylation factor, Arf
family|Schizosaccharomyces pombe|chr 2|||Manual
Length = 184
Score = 59.7 bits (138), Expect = 4e-10
Identities = 31/117 (26%), Positives = 58/117 (49%), Gaps = 1/117 (0%)
Frame = +3
Query: 87 KLLLIGDSGVGKTSILFRFSEDAFNISFISTIGIDFKIRTIDLDGKKVKLQIWDTAGQER 266
++L++G GKT+IL++ N S ++ + F + T+ K +K +WD GQ++
Sbjct: 23 RILMLGLDAAGKTTILYKLK---LNQSVVTIPTVGFNVETVTY--KNIKFNVWDVGGQDK 77
Query: 267 FRTITTAYYRGSMGIMLVYDVTNEKSFENIKNWI-RNIEENASADVEKMILGNKCDL 434
R + Y+ G+ G++ V D + + + R I + D ++L NK DL
Sbjct: 78 IRPLWRHYFTGTKGLIFVVDSADSNRISEARQELHRIISDREMRDCLLLVLANKQDL 134
>SPBC4F6.18c |arf1||ADP-ribosylation factor Arf1|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 180
Score = 56.8 bits (131), Expect = 3e-09
Identities = 32/117 (27%), Positives = 61/117 (52%), Gaps = 1/117 (0%)
Frame = +3
Query: 87 KLLLIGDSGVGKTSILFRFSEDAFNISFISTIGIDFKIRTIDLDGKKVKLQIWDTAGQER 266
++L++G GKT+IL++ ++ I TIG F + T++ + + +WD GQ++
Sbjct: 19 RILMVGLDAAGKTTILYKLKLGEI-VTTIPTIG--FNVETVEY--RNISFTVWDVGGQDK 73
Query: 267 FRTITTAYYRGSMGIMLVYDVTN-EKSFENIKNWIRNIEENASADVEKMILGNKCDL 434
R + Y++ + GI+ V D + E+ E + R + E+ D ++ NK DL
Sbjct: 74 IRPLWRHYFQNTQGIIFVVDSNDRERISEAHEELQRMLNEDELRDALLLVFANKQDL 130
>SPCC320.04c |||GTPase Gem1 |Schizosaccharomyces pombe|chr
3|||Manual
Length = 630
Score = 38.3 bits (85), Expect = 0.001
Identities = 37/159 (23%), Positives = 71/159 (44%), Gaps = 5/159 (3%)
Frame = +3
Query: 87 KLLLIGDSGVGKTSILFRFSEDAFNISFISTIGIDFKIRTIDLDGKKVKLQIWDTAGQER 266
++++ GD GVGK+S++ ++ N++ I + I + V L + DT
Sbjct: 5 RVVICGDQGVGKSSLISALIQED-NVTSIPKVFPIISIPSNPDSNDDVSLVLVDTQSDSN 63
Query: 267 FRTITTAYYRGSMGIMLVYDVTNEKSFENIKNWIRNIEENASADVEKMILGNKC-DLDSQ 443
R A + + I LVY ++ S+E + + + +V ++ NK DLD+
Sbjct: 64 EREYLAAEIKKANVICLVY--SDNYSYERVSIFWLPYFRSLGVNVPIVLCENKSEDLDNY 121
Query: 444 RQVSKERGEQLAIEYQIKFVET----SAKDSLNVEYAFY 548
+ + E + + + K +E SA + +NV FY
Sbjct: 122 QGLHTIEHEMIPLINEFKEIEACILCSALEKINVNELFY 160
>SPBC21D10.06c |map4||cell agglutination protein
Map4|Schizosaccharomyces pombe|chr 2|||Manual
Length = 948
Score = 29.9 bits (64), Expect = 0.34
Identities = 16/37 (43%), Positives = 21/37 (56%), Gaps = 1/37 (2%)
Frame = -1
Query: 601 LLASCFFSIFAFMSLAKV*NAYSTF-NESFADVSTNF 494
+L S FFS ++LA + YS F N SF D T+F
Sbjct: 6 ILLSLFFSFERLLTLANANSLYSPFNNSSFVDSDTSF 42
>SPBC342.01c |alg6|SPBC3F6.06c|glucosyltransferase
Alg6|Schizosaccharomyces pombe|chr 2|||Manual
Length = 506
Score = 28.7 bits (61), Expect = 0.79
Identities = 14/34 (41%), Positives = 20/34 (58%)
Frame = +3
Query: 99 IGDSGVGKTSILFRFSEDAFNISFISTIGIDFKI 200
IGD V ++LFRF + +F + I +GID I
Sbjct: 423 IGDMVVFSKNVLFRFIQLSFYVGMIVILGIDLFI 456
>SPBC337.13c |gtr1||Gtr1/RagA G protein Gtr1|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 308
Score = 28.7 bits (61), Expect = 0.79
Identities = 33/110 (30%), Positives = 48/110 (43%), Gaps = 6/110 (5%)
Frame = +3
Query: 87 KLLLIGDSGVGKTSIL-FRFSEDAFNISFISTIGIDFKIRTIDLDGKKVKLQIWDTAGQE 263
K+LL+G SG GK+S+ FS + ID + + G V L +WD GQE
Sbjct: 4 KVLLMGRSGSGKSSMRSIVFSNYVAKDTRRLGATIDIEHSHVRFLGNLV-LNLWDCGGQE 62
Query: 264 RF-RTITTA----YYRGSMGIMLVYDVTNEKSFENIKNWIRNIEENASAD 398
F +A +R ++ V+DV + FE RN E A+
Sbjct: 63 AFMENYLSAQRDHIFRNVQVLIYVFDV-ESREFERDLVTFRNCLEATVAN 111
>SPAC11D3.15 |||oxoprolinase |Schizosaccharomyces pombe|chr 1|||Manual
Length = 1317
Score = 27.1 bits (57), Expect = 2.4
Identities = 11/38 (28%), Positives = 23/38 (60%)
Frame = +3
Query: 306 GIMLVYDVTNEKSFENIKNWIRNIEENASADVEKMILG 419
GI L+ + E ++ +++ I+ENA + V +++LG
Sbjct: 947 GINLITSLIKEYGKNSVLRYMKAIQENAESAVRQLLLG 984
>SPAC27D7.08c |||DUF890 family protein|Schizosaccharomyces pombe|chr
1|||Manual
Length = 385
Score = 26.2 bits (55), Expect = 4.2
Identities = 13/31 (41%), Positives = 20/31 (64%), Gaps = 1/31 (3%)
Frame = -2
Query: 603 DYSLPVSFPFSLLCPWLKCK-MHIQHLTSLL 514
DYSL V FP + LCP + + +I+++ LL
Sbjct: 35 DYSLRVEFPENRLCPMVPNRATYIRYIHDLL 65
>SPAC19D5.04 |ptr1||HECT domain|Schizosaccharomyces pombe|chr
1|||Manual
Length = 3227
Score = 26.2 bits (55), Expect = 4.2
Identities = 10/21 (47%), Positives = 14/21 (66%)
Frame = -3
Query: 311 NSHRTTVVCCCYCTESLLTSS 249
+SH+T++VC Y E LL S
Sbjct: 1331 DSHKTSIVCILYLLEVLLADS 1351
>SPAC31A2.12 |||arrestin/PY protein 1|Schizosaccharomyces pombe|chr
1|||Manual
Length = 596
Score = 26.2 bits (55), Expect = 4.2
Identities = 10/23 (43%), Positives = 14/23 (60%)
Frame = +3
Query: 570 AKMEKKQEASNPSGGRSGVHKPT 638
A + +ASNP+G S H+PT
Sbjct: 546 ASLAHLSQASNPNGSSSAPHRPT 568
>SPAC9G1.11c |spn4||septin Spn4|Schizosaccharomyces pombe|chr
1|||Manual
Length = 380
Score = 25.8 bits (54), Expect = 5.6
Identities = 19/61 (31%), Positives = 34/61 (55%)
Frame = +3
Query: 84 FKLLLIGDSGVGKTSILFRFSEDAFNISFISTIGIDFKIRTIDLDGKKVKLQIWDTAGQE 263
F L+L G+SG+GKT+ F F+ + S +G + K+R + K V+++I +E
Sbjct: 29 FTLMLCGESGLGKTT----FCNTLFSTTIKSHMGPE-KVRAKHAE-KTVEIEITKAELEE 82
Query: 264 R 266
+
Sbjct: 83 K 83
>SPBC83.07 |jmj3||Lid2 complex subunit Jmj3|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 752
Score = 25.8 bits (54), Expect = 5.6
Identities = 12/26 (46%), Positives = 15/26 (57%)
Frame = -1
Query: 151 SSENLNSIDVFPTPESPIRSNLNKQS 74
SSE +S+DV PTP + NL S
Sbjct: 617 SSEPTSSVDVAPTPVEDVNVNLESIS 642
>SPBC25B2.01 ||SPBC2G5.08|elongation factor 1 alpha related
protein|Schizosaccharomyces pombe|chr 2|||Manual
Length = 592
Score = 25.8 bits (54), Expect = 5.6
Identities = 16/58 (27%), Positives = 33/58 (56%), Gaps = 1/58 (1%)
Frame = +3
Query: 222 KKVKLQIWDTAGQERFRTITTAYYRGSMGI-MLVYDVTNEKSFENIKNWIRNIEENAS 392
K ++L I D R T+T G++ + ++YDV++++ +KN IRN + +++
Sbjct: 403 KPLRLSIDDVYRSPRSVTVTGRVEAGNVQVNQVLYDVSSQED-AYVKNVIRNSDPSST 459
>SPAC23A1.05 |||sequence orphan|Schizosaccharomyces pombe|chr
1|||Manual
Length = 101
Score = 25.0 bits (52), Expect = 9.7
Identities = 8/16 (50%), Positives = 12/16 (75%)
Frame = +3
Query: 42 NQIVVKMAKTYDCLFK 89
N +V+K K YDC+F+
Sbjct: 3 NPVVIKAKKDYDCVFE 18
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,786,032
Number of Sequences: 5004
Number of extensions: 58377
Number of successful extensions: 239
Number of sequences better than 10.0: 33
Number of HSP's better than 10.0 without gapping: 216
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 225
length of database: 2,362,478
effective HSP length: 70
effective length of database: 2,012,198
effective search space used: 301829700
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -