BLASTX 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= brS-1255 (664 letters) Database: spombe 5004 sequences; 2,362,478 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value SPAC9E9.07c |ypt2||GTPase Ypt2 |Schizosaccharomyces pombe|chr 1|... 256 3e-69 SPBC1703.10 |ypt1||GTPase Ypt1|Schizosaccharomyces pombe|chr 2||... 214 1e-56 SPAC18G6.03 |ypt3||GTPase Ypt3|Schizosaccharomyces pombe|chr 1||... 199 3e-52 SPAC4C5.02c |ryh1|hos1|GTPase Ryh1|Schizosaccharomyces pombe|chr... 152 5e-38 SPAC1B3.11c |ypt4||GTPase Ypt4|Schizosaccharomyces pombe|chr 1||... 141 7e-35 SPBC405.04c |ypt7||GTPase Ypt7|Schizosaccharomyces pombe|chr 2||... 132 4e-32 SPAC6F6.15 |ypt5||GTPase Ypt5|Schizosaccharomyces pombe|chr 1|||... 132 6e-32 SPAC17H9.09c |ras1|ste5|GTPase Ras1|Schizosaccharomyces pombe|ch... 123 3e-29 SPAPB1A10.10c |ypt71||GTPase Ypt71|Schizosaccharomyces pombe|chr... 117 2e-27 SPBC428.16c |rhb1||Rheb GTPase Rhb1|Schizosaccharomyces pombe|ch... 93 3e-20 SPBC1289.03c |spi1||Ran GTPase Spi1|Schizosaccharomyces pombe|ch... 88 9e-19 SPAC23C4.08 |rho3||Rho family GTPase Rho3|Schizosaccharomyces po... 78 1e-15 SPAC20H4.11c |rho5||Rho family GTPase Rho5|Schizosaccharomyces p... 77 2e-15 SPAC1565.06c |spg1|sid3|GTPase Spg1|Schizosaccharomyces pombe|ch... 75 7e-15 SPAC1F7.04 |rho1||Rho family GTPase Rho1|Schizosaccharomyces pom... 75 1e-14 SPAC16.01 |rho2||Rho family GTPase Rho2|Schizosaccharomyces pomb... 69 8e-13 SPAC110.03 |cdc42||Rho family GTPase Cdc42|Schizosaccharomyces p... 66 6e-12 SPAC16A10.04 |rho4||Rho family GTPase Rho4|Schizosaccharomyces p... 65 1e-11 SPAC22F3.05c |alp41||ADP-ribosylation factor Alp41|Schizosacchar... 62 9e-11 SPBC1539.08 |||ADP-ribosylation factor, Arf family|Schizosacchar... 60 4e-10 SPBC4F6.18c |arf1||ADP-ribosylation factor Arf1|Schizosaccharomy... 57 3e-09 SPCC320.04c |||GTPase Gem1 |Schizosaccharomyces pombe|chr 3|||Ma... 38 0.001 SPBC21D10.06c |map4||cell agglutination protein Map4|Schizosacch... 30 0.34 SPBC342.01c |alg6|SPBC3F6.06c|glucosyltransferase Alg6|Schizosac... 29 0.79 SPBC337.13c |gtr1||Gtr1/RagA G protein Gtr1|Schizosaccharomyces ... 29 0.79 SPAC11D3.15 |||oxoprolinase |Schizosaccharomyces pombe|chr 1|||M... 27 2.4 SPAC27D7.08c |||DUF890 family protein|Schizosaccharomyces pombe|... 26 4.2 SPAC19D5.04 |ptr1||HECT domain|Schizosaccharomyces pombe|chr 1||... 26 4.2 SPAC31A2.12 |||arrestin/PY protein 1|Schizosaccharomyces pombe|c... 26 4.2 SPAC9G1.11c |spn4||septin Spn4|Schizosaccharomyces pombe|chr 1||... 26 5.6 SPBC83.07 |jmj3||Lid2 complex subunit Jmj3|Schizosaccharomyces p... 26 5.6 SPBC25B2.01 ||SPBC2G5.08|elongation factor 1 alpha related prote... 26 5.6 SPAC23A1.05 |||sequence orphan|Schizosaccharomyces pombe|chr 1||... 25 9.7 >SPAC9E9.07c |ypt2||GTPase Ypt2 |Schizosaccharomyces pombe|chr 1|||Manual Length = 200 Score = 256 bits (626), Expect = 3e-69 Identities = 118/180 (65%), Positives = 154/180 (85%), Gaps = 1/180 (0%) Frame = +3 Query: 66 KTYDCLFKLLLIGDSGVGKTSILFRFSEDAFNISFISTIGIDFKIRTIDLDGKKVKLQIW 245 K+YD L KLLLIGDSGVGK+ +L RFSED+F SFI+TIGIDFKIRTI+LDGK++KLQIW Sbjct: 4 KSYDYLIKLLLIGDSGVGKSCLLLRFSEDSFTPSFITTIGIDFKIRTIELDGKRIKLQIW 63 Query: 246 DTAGQERFRTITTAYYRGSMGIMLVYDVTNEKSFENIKNWIRNIEENASADVEKMILGNK 425 DTAGQERFRTITTAYYRG+MGI+L+YDVT++KSF+N++ W N+E++AS +V K+++GNK Sbjct: 64 DTAGQERFRTITTAYYRGAMGILLLYDVTDKKSFDNVRTWFSNVEQHASENVYKILIGNK 123 Query: 426 CDLDSQRQVSKERGEQLAIEYQIKFVETSAKDSLNVEYAFYTLARDI-KAKMEKKQEASN 602 CD + QRQVS E+G+ LA E +KF+E SAK ++NV+ AF+TLAR+I K K++ + E SN Sbjct: 124 CDCEDQRQVSFEQGQALADELGVKFLEASAKTNVNVDEAFFTLAREIKKQKIDAENEFSN 183 >SPBC1703.10 |ypt1||GTPase Ypt1|Schizosaccharomyces pombe|chr 2|||Manual Length = 203 Score = 214 bits (522), Expect = 1e-56 Identities = 100/181 (55%), Positives = 134/181 (74%) Frame = +3 Query: 60 MAKTYDCLFKLLLIGDSGVGKTSILFRFSEDAFNISFISTIGIDFKIRTIDLDGKKVKLQ 239 M YD LFKLLLIGDSGVGK+ +L RF++D + S+ISTIG+DFKIRT +L+GK VKLQ Sbjct: 1 MNPEYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTFELEGKTVKLQ 60 Query: 240 IWDTAGQERFRTITTAYYRGSMGIMLVYDVTNEKSFENIKNWIRNIEENASADVEKMILG 419 IWDTAGQERFRTIT++YYRG+ GI++VYDVT++ SF N+K W++ I+ A V ++++G Sbjct: 61 IWDTAGQERFRTITSSYYRGAHGIIIVYDVTDQDSFNNVKQWLQEIDRYAVEGVNRLLVG 120 Query: 420 NKCDLDSQRQVSKERGEQLAIEYQIKFVETSAKDSLNVEYAFYTLARDIKAKMEKKQEAS 599 NK D+ ++ V ++ A I F+ETSAKDS NVE AF T++R IK +M AS Sbjct: 121 NKSDMVDKKVVEYSVAKEFADSLNIPFLETSAKDSTNVEQAFLTMSRQIKERMGNNTFAS 180 Query: 600 N 602 + Sbjct: 181 S 181 >SPAC18G6.03 |ypt3||GTPase Ypt3|Schizosaccharomyces pombe|chr 1|||Manual Length = 214 Score = 199 bits (485), Expect = 3e-52 Identities = 94/200 (47%), Positives = 135/200 (67%), Gaps = 5/200 (2%) Frame = +3 Query: 72 YDCLFKLLLIGDSGVGKTSILFRFSEDAFNISFISTIGIDFKIRTIDLDGKKVKLQIWDT 251 YD LFK +LIGDSGVGK+++L RF+ + FNI STIG++F R I LD KK+K QIWDT Sbjct: 7 YDYLFKTVLIGDSGVGKSNLLMRFTRNEFNIESKSTIGVEFATRNIVLDNKKIKAQIWDT 66 Query: 252 AGQERFRTITTAYYRGSMGIMLVYDVTNEKSFENIKNWIRNIEENASADVEKMILGNKCD 431 AGQER+R IT+AYYRG++G ++VYD+T + SF+N+ W++ + E+A +++ M++GNK D Sbjct: 67 AGQERYRAITSAYYRGAVGALIVYDITKQSSFDNVGRWLKELREHADSNIVIMLVGNKTD 126 Query: 432 LDSQRQVSKERGEQLAIEYQIKFVETSAKDSLNVEYAFYTLARDI-----KAKMEKKQEA 596 L R VS E + A E + F+ETSA D+ NVE AF T+ +I +E + Sbjct: 127 LLHLRAVSTEEAQAFAAENNLSFIETSAMDASNVEEAFQTVLTEIFRIVSNRSLEAGDDG 186 Query: 597 SNPSGGRSGVHKPTLNDARK 656 +P+ G++ PT+ND K Sbjct: 187 VHPTAGQTLNIAPTMNDLNK 206 >SPAC4C5.02c |ryh1|hos1|GTPase Ryh1|Schizosaccharomyces pombe|chr 1|||Manual Length = 201 Score = 152 bits (368), Expect = 5e-38 Identities = 72/159 (45%), Positives = 108/159 (67%) Frame = +3 Query: 84 FKLLLIGDSGVGKTSILFRFSEDAFNISFISTIGIDFKIRTIDLDGKKVKLQIWDTAGQE 263 FKL+ +G+ VGKTS++ RF D F+ ++ +TIGIDF +T+ L+ + V+LQ+WDTAGQE Sbjct: 12 FKLVFLGEQSVGKTSLITRFMYDQFDNTYQATIGIDFLSKTMYLEDRTVRLQLWDTAGQE 71 Query: 264 RFRTITTAYYRGSMGIMLVYDVTNEKSFENIKNWIRNIEENASADVEKMILGNKCDLDSQ 443 RFR++ +Y R S ++VYD+TN SF N + WI ++ DV +++GNK DL + Sbjct: 72 RFRSLIPSYIRDSSVAIIVYDITNHNSFVNTEKWIEDVRAERGDDVIIVLVGNKTDLADK 131 Query: 444 RQVSKERGEQLAIEYQIKFVETSAKDSLNVEYAFYTLAR 560 RQV++E GE+ A E +I +ETSAK NV+ F +A+ Sbjct: 132 RQVTQEEGEKKAKELKIMHMETSAKAGHNVKLLFRKIAQ 170 >SPAC1B3.11c |ypt4||GTPase Ypt4|Schizosaccharomyces pombe|chr 1|||Manual Length = 234 Score = 141 bits (342), Expect = 7e-35 Identities = 73/177 (41%), Positives = 109/177 (61%), Gaps = 5/177 (2%) Frame = +3 Query: 66 KTYDCLFKLLLIGDSGVGKTSILFRFSEDAFNISFISTIGIDFKIRTIDL----DGKKVK 233 ++YD L K++L G SG GK+ +L RF ++ ++ T+GIDF R I + K++K Sbjct: 4 ESYDYLVKIVLAGPSGTGKSCLLQRFVKNQWDDQVSHTVGIDFASRIISVGMGNQQKRIK 63 Query: 234 LQIWDTAGQERFRTITTAYYRGSMGIMLVYDVTNEKSFENIKNWIRNIEENASADVEKMI 413 LQIWDTAGQE+FR++ YYRG+ G +LVYDVTN+ SFE + +W+ +I A + + ++ Sbjct: 64 LQIWDTAGQEKFRSVARNYYRGAAGAVLVYDVTNKDSFEELSSWLSDIRAMAPSTICVVL 123 Query: 414 LGNKCDLDSQRQVSKERGEQLAIEYQIKFV-ETSAKDSLNVEYAFYTLARDIKAKME 581 G+K DL +QRQVS E + E I ETS+ NVE F ++ I ++E Sbjct: 124 AGSKSDLQNQRQVSTEEAAEFCSEKHISSAHETSSYTGSNVEECFLSVVSTIITRIE 180 >SPBC405.04c |ypt7||GTPase Ypt7|Schizosaccharomyces pombe|chr 2|||Manual Length = 205 Score = 132 bits (319), Expect = 4e-32 Identities = 72/180 (40%), Positives = 112/180 (62%), Gaps = 6/180 (3%) Frame = +3 Query: 81 LFKLLLIGDSGVGKTSILFRFSEDAFNISFISTIGIDFKIRTIDLDGKKVKLQIWDTAGQ 260 L K++++G+SGVGKTSI+ ++ F+ + +TIG DF + + +D K V LQ+WDTAGQ Sbjct: 8 LLKVIILGESGVGKTSIMNQYVNRKFSKDYKATIGADFLTKEVLVDDKVVTLQLWDTAGQ 67 Query: 261 ERFRTITTAYYRGSMGIMLVYDVTNEKSFENIKNWIRNIEENASADVEK----MILGNKC 428 ERF+++ A+YRG+ +LVYDV N KSFE + +W AS + ++LGNK Sbjct: 68 ERFQSLGVAFYRGADCCVLVYDVNNSKSFETLDSWRDEFLIQASPSNPETFPFILLGNKV 127 Query: 429 DLDSQ-RQVSKERGEQLA-IEYQIKFVETSAKDSLNVEYAFYTLARDIKAKMEKKQEASN 602 D++ Q R VSK + +I + ETSAK+++NV+ AF T+A+ M+ A++ Sbjct: 128 DVEEQKRMVSKSKALAFCQARGEIPYFETSAKEAINVQEAFETVAKLALENMDSDDIAAD 187 >SPAC6F6.15 |ypt5||GTPase Ypt5|Schizosaccharomyces pombe|chr 1|||Manual Length = 211 Score = 132 bits (318), Expect = 6e-32 Identities = 75/193 (38%), Positives = 111/193 (57%), Gaps = 2/193 (1%) Frame = +3 Query: 87 KLLLIGDSGVGKTSILFRFSEDAFNISFISTIGIDFKIRTIDLD-GKKVKLQIWDTAGQE 263 KL+L+GDS VGK+S++ RF +D F+ STIG F +T+ +D VKL+IWDTAGQE Sbjct: 16 KLVLLGDSAVGKSSLVLRFVKDQFDDYRESTIGAAFLTQTLPIDENTSVKLEIWDTAGQE 75 Query: 264 RFRTITTAYYRGSMGIMLVYDVTNEKSFENIKNWIRNIEENASADVEKMILGNKCDLDSQ 443 R++++ YYR + ++VYD+T S E K+WI+ ++ A + + GNK DL + Sbjct: 76 RYKSLAPMYYRNANCAIVVYDITQAASLEKAKSWIKELQRQAPEGIVIALAGNKLDLAQE 135 Query: 444 RQ-VSKERGEQLAIEYQIKFVETSAKDSLNVEYAFYTLARDIKAKMEKKQEASNPSGGRS 620 R+ V K E A E + F ETSAK + NV F +A+ K +E K + + R Sbjct: 136 RRAVEKADAEAYAAEANLLFFETSAKTAENVNELFTAIAK--KLPLEDKLNQARGAVNR- 192 Query: 621 GVHKPTLNDARKP 659 GV+ A +P Sbjct: 193 GVNLSEARPAAQP 205 >SPAC17H9.09c |ras1|ste5|GTPase Ras1|Schizosaccharomyces pombe|chr 1|||Manual Length = 219 Score = 123 bits (296), Expect = 3e-29 Identities = 67/179 (37%), Positives = 104/179 (58%), Gaps = 1/179 (0%) Frame = +3 Query: 60 MAKTYDCLFKLLLIGDSGVGKTSILFRFSEDAFNISFISTIGIDFKIRTIDLDGKKVKLQ 239 M TY +KL+++GD GVGK+++ + + F + TI ++ + ++DG+ L Sbjct: 1 MRSTYLREYKLVVVGDGGVGKSALTIQLIQSHFVDEYDPTIEDSYR-KKCEIDGEGALLD 59 Query: 240 IWDTAGQERFRTITTAYYRGSMGIMLVYDVTNEKSFENIKNWIRNIEENASADVEKMIL- 416 + DTAGQE + + Y R G +LVY++T+ SF+ I + + I D ++L Sbjct: 60 VLDTAGQEEYSAMREQYMRTGEGFLLVYNITSRSSFDEISTFYQQILRVKDKDTFPVVLV 119 Query: 417 GNKCDLDSQRQVSKERGEQLAIEYQIKFVETSAKDSLNVEYAFYTLARDIKAKMEKKQE 593 NKCDL+++R VS+ GEQLA +VETSAK LNVE AFY+L R I+ + K +E Sbjct: 120 ANKCDLEAERVVSRAEGEQLAKSMHCLYVETSAKLRLNVEEAFYSLVRTIR-RYNKSEE 177 >SPAPB1A10.10c |ypt71||GTPase Ypt71|Schizosaccharomyces pombe|chr 1|||Manual Length = 208 Score = 117 bits (281), Expect = 2e-27 Identities = 64/165 (38%), Positives = 103/165 (62%), Gaps = 7/165 (4%) Frame = +3 Query: 87 KLLLIGDSGVGKTSILFRFSEDAFNISFISTIGIDFKIRTIDLDGKKVKLQIWDTAGQER 266 K++++GDSGVGKT ++ +F F+ + +TIG DF + + +D K V LQ+WDTAGQER Sbjct: 10 KVVILGDSGVGKTCLMNQFVNQKFSREYKATIGADFLTKDVVVDDKLVTLQLWDTAGQER 69 Query: 267 FRTITTAYYRGSMGIMLVYDVTNEKSFENIKNWIRNIEENASAD---VEKMILGNKCDLD 437 F+++ A+YRG+ ++VY+V N KSF++++NW + S D +I+GN+ D D Sbjct: 70 FQSLGMAFYRGADCCVIVYNVNNSKSFDSVENWRQEFLYQTSQDECAFPFIIVGNQIDKD 129 Query: 438 -SQRQVSKERG-EQLAIEYQIKFV--ETSAKDSLNVEYAFYTLAR 560 S+R VS R + ++ + E SAK++ NV F T++R Sbjct: 130 ASKRAVSLHRALDYCKSKHGSNMIHFEASAKENTNVTDLFETVSR 174 >SPBC428.16c |rhb1||Rheb GTPase Rhb1|Schizosaccharomyces pombe|chr 2|||Manual Length = 185 Score = 93.1 bits (221), Expect = 3e-20 Identities = 58/181 (32%), Positives = 98/181 (54%), Gaps = 1/181 (0%) Frame = +3 Query: 87 KLLLIGDSGVGKTSILFRFSEDAFNISFISTIGIDFKIRTIDLDGKKVKLQIWDTAGQER 266 ++ ++G VGK+S+ ++ E+ F S+ TI F + I G++ +I DTAGQ+ Sbjct: 8 RIAVLGSRSVGKSSLTVQYVENHFVESYYPTIENTFS-KNIKYKGQEFATEIIDTAGQDE 66 Query: 267 FRTITTAYYRGSMGIMLVYDVTNEKSFENIKNWIRNIEENASAD-VEKMILGNKCDLDSQ 443 + + + + G G +LVY +T++ SFE +K I + + V +++GNK DL Q Sbjct: 67 YSILNSKHSIGIHGYVLVYSITSKSSFEMVKIVRDKILNHTGTEWVPIVVVGNKSDLHMQ 126 Query: 444 RQVSKERGEQLAIEYQIKFVETSAKDSLNVEYAFYTLARDIKAKMEKKQEASNPSGGRSG 623 R V+ E G+ LA E++ + E SA+ + NV AF + +I EK+ S P G+ Sbjct: 127 RAVTAEEGKALANEWKCAWTEASARHNENVARAFELIISEI----EKQANPSPPGDGKGC 182 Query: 624 V 626 V Sbjct: 183 V 183 >SPBC1289.03c |spi1||Ran GTPase Spi1|Schizosaccharomyces pombe|chr 2|||Manual Length = 216 Score = 88.2 bits (209), Expect = 9e-19 Identities = 49/162 (30%), Positives = 91/162 (56%), Gaps = 1/162 (0%) Frame = +3 Query: 84 FKLLLIGDSGVGKTSILFRFSEDAFNISFISTIGIDFKIRTIDLDGKKVKLQIWDTAGQE 263 FKL+L+GD G GKT+ + R F +I+T+G++ + ++ +WDTAGQE Sbjct: 10 FKLVLVGDGGTGKTTFVKRHLTGEFEKKYIATLGVEVHPLHFHTNFGEICFNVWDTAGQE 69 Query: 264 RFRTITTAYY-RGSMGIMLVYDVTNEKSFENIKNWIRNIEENASADVEKMILGNKCDLDS 440 + + YY +G GI +++DVT+ +++N+ +W R++ ++ ++ GNK D+ Sbjct: 70 KLGGLRDGYYIQGQCGI-IMFDVTSRITYKNVPHWWRDL-VRVCENIPIVLCGNKVDV-K 126 Query: 441 QRQVSKERGEQLAIEYQIKFVETSAKDSLNVEYAFYTLARDI 566 +R+V K + + +++ + SAK + N E F LAR + Sbjct: 127 ERKV-KAKAITFHRKKNLQYYDISAKSNYNFEKPFLWLARKL 167 >SPAC23C4.08 |rho3||Rho family GTPase Rho3|Schizosaccharomyces pombe|chr 1|||Manual Length = 205 Score = 77.8 bits (183), Expect = 1e-15 Identities = 52/168 (30%), Positives = 87/168 (51%), Gaps = 10/168 (5%) Frame = +3 Query: 87 KLLLIGDSGVGKTSILFRFSEDAFNISFISTIGIDFKIRTIDLDGKKVKLQIWDTAGQER 266 K++++GD GKTS+L F++ F + TI ++ I I +DG ++L +WDTAGQE Sbjct: 15 KIVILGDGAAGKTSLLNVFTKGYFPQVYEPTIFENY-IHDIFVDGNSIELSLWDTAGQEE 73 Query: 267 FRTITTAYYRGSMGIMLVYDVTNEKSFEN-IKNWIRNIEENASADVEKMILGNKCDL--- 434 + + + Y + IM+ + V + S EN I W+ + N V+ +++ KCDL Sbjct: 74 YDQLRSLSYSDTHVIMICFAVDSRDSLENVITKWLPEVSSNCPG-VKLVLVALKCDLRGA 132 Query: 435 -----DSQRQVSKERGEQLAIEYQ-IKFVETSAKDSLNVEYAFYTLAR 560 D + + E G A + ++++E SAK + V AF AR Sbjct: 133 DEEQVDHSKIIDYEEGLAAAKKINAVRYLECSAKLNRGVNEAFTEAAR 180 >SPAC20H4.11c |rho5||Rho family GTPase Rho5|Schizosaccharomyces pombe|chr 1|||Manual Length = 200 Score = 77.4 bits (182), Expect = 2e-15 Identities = 55/187 (29%), Positives = 99/187 (52%), Gaps = 14/187 (7%) Frame = +3 Query: 87 KLLLIGDSGVGKTSILFRFSEDAFNISFISTIGIDFKIRTIDLDGKKVKLQIWDTAGQER 266 KL+++GD GKT +L FS+ F ++ T+ ++ + +++DG+ ++L +WDTAGQE Sbjct: 8 KLVIVGDGACGKTCLLIVFSKGTFPEVYVPTVFENY-VADVEVDGRHIELALWDTAGQED 66 Query: 267 FRTITTAYYRGSMGIMLVYDVTNEKSFENI-KNWIRNIEENASADVEKMILGNKCDL--- 434 + + Y S +++ + V +S +N+ + WI + S ++ +++G K DL Sbjct: 67 YDRLRPLSYPDSHVVLICFSVDAPESLDNVQEKWISEVLHFCS-NLPILLVGCKVDLRND 125 Query: 435 ---------DSQRQVSKERGEQLAIEY-QIKFVETSAKDSLNVEYAFYTLARDIKAKMEK 584 SQ+ ++ E G+ +A + K++E SAK + V F T AR A M K Sbjct: 126 PKTIEELSKTSQKPITFEEGQVVAQKIGAYKYLECSAKLNEGVNEVFETAAR---ASMLK 182 Query: 585 KQEASNP 605 + AS P Sbjct: 183 FKPASVP 189 >SPAC1565.06c |spg1|sid3|GTPase Spg1|Schizosaccharomyces pombe|chr 1|||Manual Length = 198 Score = 75.4 bits (177), Expect = 7e-15 Identities = 45/190 (23%), Positives = 93/190 (48%), Gaps = 9/190 (4%) Frame = +3 Query: 63 AKTYDCLFKLLLIGDSGVGKTSILFRFSEDAFNISFISTIGIDFKIRTIDLDGKKVKLQI 242 A+ + K+ +IGDS +GKTS++ + + +F+ T+G++F +TI + ++ I Sbjct: 4 ARKNNVTIKVGMIGDSSIGKTSLMVTYVQGSFDEESTQTLGVNFMEKTISIRNTEITFSI 63 Query: 243 WDTAGQERFRTITTAYYRGSMGIMLVYDVTNEKSFENIKNWIRNIEENASADVEKMILGN 422 WD GQ F + ++ I+ ++D++ + + +IK W R + +++G Sbjct: 64 WDLGGQREFVNMLPMVCNDAVAILFMFDLSRKSTLNSIKEWYRQ-ARGFNKTAVPILIGT 122 Query: 423 KCD------LDSQRQVSKERGEQLAIEYQIKFVETSAKDSLNVEYAF-YTLAR--DIKAK 575 K D + Q +++K+ + A + V S S+NV+ F LA+ D+K Sbjct: 123 KYDHFMTFPREDQEEITKQ-ARRYAKAMKASLVFCSTSHSINVQKIFKIVLAKVFDLKCT 181 Query: 576 MEKKQEASNP 605 + + + +P Sbjct: 182 IPEIKNVGDP 191 >SPAC1F7.04 |rho1||Rho family GTPase Rho1|Schizosaccharomyces pombe|chr 1|||Manual Length = 202 Score = 74.5 bits (175), Expect = 1e-14 Identities = 54/190 (28%), Positives = 96/190 (50%), Gaps = 14/190 (7%) Frame = +3 Query: 87 KLLLIGDSGVGKTSILFRFSEDAFNISFISTIGIDFKIRTIDLDGKKVKLQIWDTAGQER 266 KL+++GD GKT +L FS+ F ++ T+ ++ + +++DG+ V+L +WDTAGQE Sbjct: 8 KLVIVGDGACGKTCLLIVFSKGTFPEVYVPTVFENY-VADVEVDGRHVELALWDTAGQED 66 Query: 267 FRTITTAYYRGSMGIMLVYDVTNEKSFENI-KNWIRNIEENASADVEKMILGNKCDL--- 434 + + Y S I++ + V + S +N+ + WI + S+ + +++ K DL Sbjct: 67 YDRLRPLSYPDSHVILICFAVDSPDSLDNVQEKWISEVLHFCSS-LPILLVACKADLRND 125 Query: 435 ---------DSQRQVSKERGEQLAIEY-QIKFVETSAKDSLNVEYAFYTLARDIKAKMEK 584 +Q V+ E G+ +A + K++E SAK + V F + R A M K Sbjct: 126 PKIIEELSKTNQHPVTTEEGQAVAQKIGAYKYLECSAKTNEGVREVFESATR---AAMLK 182 Query: 585 KQEASNPSGG 614 + PS G Sbjct: 183 HKPKVKPSSG 192 >SPAC16.01 |rho2||Rho family GTPase Rho2|Schizosaccharomyces pombe|chr 1|||Manual Length = 200 Score = 68.5 bits (160), Expect = 8e-13 Identities = 38/119 (31%), Positives = 65/119 (54%), Gaps = 1/119 (0%) Frame = +3 Query: 87 KLLLIGDSGVGKTSILFRFSEDAFNISFISTIGIDFKIRTIDLDGKKVKLQIWDTAGQER 266 KL+++GD GKTS+L F+ F ++ T+ ++ + +DGK V+L +WDTAGQE Sbjct: 10 KLVVVGDGACGKTSLLSVFTLGYFPTEYVPTVFENY-VSDCRVDGKSVQLALWDTAGQEE 68 Query: 267 FRTITTAYYRGSMGIMLVYDVTNEKSFENIK-NWIRNIEENASADVEKMILGNKCDLDS 440 + + Y + I++ + + + S EN+ WI I +V +++G K DL S Sbjct: 69 YERLRPMSYAKAHIILVGFAIDSPDSLENVSTKWIEEI-NTLCPNVPFILVGMKADLRS 126 >SPAC110.03 |cdc42||Rho family GTPase Cdc42|Schizosaccharomyces pombe|chr 1|||Manual Length = 192 Score = 65.7 bits (153), Expect = 6e-12 Identities = 45/167 (26%), Positives = 84/167 (50%), Gaps = 14/167 (8%) Frame = +3 Query: 87 KLLLIGDSGVGKTSILFRFSEDAFNISFISTIGIDFKIRTIDLDGKKVKLQIWDTAGQER 266 K +++GD VGKT +L ++ + F ++ T+ ++ + T+ + + L ++DTAGQE Sbjct: 5 KCVVVGDGAVGKTCLLISYTTNKFPSDYVPTVFDNYAV-TVMIGDEPYTLGLFDTAGQED 63 Query: 267 FRTITTAYYRGSMGIMLVYDVTNEKSFENIK-NWIRNIEENASADVEKMILGNKCDL--- 434 + + Y + ++ + VT+ SFEN+K W + + V +I+G + DL Sbjct: 64 YDRLRPLSYPQTDVFLVCFSVTSPASFENVKEKWFPEVHHHCPG-VPCLIVGTQIDLRDD 122 Query: 435 ---------DSQRQVSKERGEQLAIEY-QIKFVETSAKDSLNVEYAF 545 Q ++ E+GE+LA E +K+VE SA ++ F Sbjct: 123 PSVQQKLARQHQHPLTHEQGERLARELGAVKYVECSALTQKGLKNVF 169 >SPAC16A10.04 |rho4||Rho family GTPase Rho4|Schizosaccharomyces pombe|chr 1|||Manual Length = 203 Score = 64.9 bits (151), Expect = 1e-11 Identities = 44/167 (26%), Positives = 79/167 (47%), Gaps = 14/167 (8%) Frame = +3 Query: 87 KLLLIGDSGVGKTSILFRFSEDAFNISFISTIGIDFKIR-TIDLDGKKVKLQIWDTAGQE 263 KL+++GD G GKT +L FS F ++ T+ ++ T + K ++L +WDTAGQE Sbjct: 16 KLVVVGDGGCGKTCLLIVFSSGTFPERYVPTVFENYITDITYGPNSKVIELALWDTAGQE 75 Query: 264 RFRTITTAYYRGSMGIMLVYDVTNEKSFENI-KNWIRNIEENASADVEKMILGNKCDLDS 440 + + Y S I+L + + S N+ + W + ++ +++G K DL Sbjct: 76 EYDRLRPLSYPNSNVILLCFSIDCPASLNNVTEKWYPEV-QHFCPRTPIVLVGLKADLRK 134 Query: 441 QRQ------------VSKERGEQLAIEYQIKFVETSAKDSLNVEYAF 545 R V+ ++ + +A+ +VE SAK++ V F Sbjct: 135 DRNATEVLRTQGLTPVTYQQAQSVALSMNAPYVECSAKENTGVNEVF 181 >SPAC22F3.05c |alp41||ADP-ribosylation factor Alp41|Schizosaccharomyces pombe|chr 1|||Manual Length = 186 Score = 61.7 bits (143), Expect = 9e-11 Identities = 48/178 (26%), Positives = 84/178 (47%), Gaps = 5/178 (2%) Frame = +3 Query: 51 VVKMAKTYDCLFKLLLIGDSGVGKTSIL-FRFSEDAFNISFISTIGIDFKIRTIDLDGKK 227 +++ K + ++LL+G GKT+IL +ED +S T G F+IRT++++G Sbjct: 6 ILRQQKLKEREVRVLLLGLDNAGKTTILKCLLNEDVNEVS--PTFG--FQIRTLEVEG-- 59 Query: 228 VKLQIWDTAGQERFRTITTAYYRGSMGIMLVYDVTNEKSFENIKNWIRN-IEENASADVE 404 ++ IWD GQ+ R Y+ + I+ V D ++ E +N ++ + E Sbjct: 60 LRFTIWDIGGQKTLRNFWKNYFESTEAIIWVVDSLDDLRLEECRNTLQELLVEEKLLFTS 119 Query: 405 KMILGNKCDLD---SQRQVSKERGEQLAIEYQIKFVETSAKDSLNVEYAFYTLARDIK 569 ++L NK D+ S ++SK + SA LN++ A LA D+K Sbjct: 120 ILVLANKSDVSGALSSEEISKILNISKYKSSHWRIFSVSALTGLNIKDAISWLANDLK 177 >SPBC1539.08 |||ADP-ribosylation factor, Arf family|Schizosaccharomyces pombe|chr 2|||Manual Length = 184 Score = 59.7 bits (138), Expect = 4e-10 Identities = 31/117 (26%), Positives = 58/117 (49%), Gaps = 1/117 (0%) Frame = +3 Query: 87 KLLLIGDSGVGKTSILFRFSEDAFNISFISTIGIDFKIRTIDLDGKKVKLQIWDTAGQER 266 ++L++G GKT+IL++ N S ++ + F + T+ K +K +WD GQ++ Sbjct: 23 RILMLGLDAAGKTTILYKLK---LNQSVVTIPTVGFNVETVTY--KNIKFNVWDVGGQDK 77 Query: 267 FRTITTAYYRGSMGIMLVYDVTNEKSFENIKNWI-RNIEENASADVEKMILGNKCDL 434 R + Y+ G+ G++ V D + + + R I + D ++L NK DL Sbjct: 78 IRPLWRHYFTGTKGLIFVVDSADSNRISEARQELHRIISDREMRDCLLLVLANKQDL 134 >SPBC4F6.18c |arf1||ADP-ribosylation factor Arf1|Schizosaccharomyces pombe|chr 2|||Manual Length = 180 Score = 56.8 bits (131), Expect = 3e-09 Identities = 32/117 (27%), Positives = 61/117 (52%), Gaps = 1/117 (0%) Frame = +3 Query: 87 KLLLIGDSGVGKTSILFRFSEDAFNISFISTIGIDFKIRTIDLDGKKVKLQIWDTAGQER 266 ++L++G GKT+IL++ ++ I TIG F + T++ + + +WD GQ++ Sbjct: 19 RILMVGLDAAGKTTILYKLKLGEI-VTTIPTIG--FNVETVEY--RNISFTVWDVGGQDK 73 Query: 267 FRTITTAYYRGSMGIMLVYDVTN-EKSFENIKNWIRNIEENASADVEKMILGNKCDL 434 R + Y++ + GI+ V D + E+ E + R + E+ D ++ NK DL Sbjct: 74 IRPLWRHYFQNTQGIIFVVDSNDRERISEAHEELQRMLNEDELRDALLLVFANKQDL 130 >SPCC320.04c |||GTPase Gem1 |Schizosaccharomyces pombe|chr 3|||Manual Length = 630 Score = 38.3 bits (85), Expect = 0.001 Identities = 37/159 (23%), Positives = 71/159 (44%), Gaps = 5/159 (3%) Frame = +3 Query: 87 KLLLIGDSGVGKTSILFRFSEDAFNISFISTIGIDFKIRTIDLDGKKVKLQIWDTAGQER 266 ++++ GD GVGK+S++ ++ N++ I + I + V L + DT Sbjct: 5 RVVICGDQGVGKSSLISALIQED-NVTSIPKVFPIISIPSNPDSNDDVSLVLVDTQSDSN 63 Query: 267 FRTITTAYYRGSMGIMLVYDVTNEKSFENIKNWIRNIEENASADVEKMILGNKC-DLDSQ 443 R A + + I LVY ++ S+E + + + +V ++ NK DLD+ Sbjct: 64 EREYLAAEIKKANVICLVY--SDNYSYERVSIFWLPYFRSLGVNVPIVLCENKSEDLDNY 121 Query: 444 RQVSKERGEQLAIEYQIKFVET----SAKDSLNVEYAFY 548 + + E + + + K +E SA + +NV FY Sbjct: 122 QGLHTIEHEMIPLINEFKEIEACILCSALEKINVNELFY 160 >SPBC21D10.06c |map4||cell agglutination protein Map4|Schizosaccharomyces pombe|chr 2|||Manual Length = 948 Score = 29.9 bits (64), Expect = 0.34 Identities = 16/37 (43%), Positives = 21/37 (56%), Gaps = 1/37 (2%) Frame = -1 Query: 601 LLASCFFSIFAFMSLAKV*NAYSTF-NESFADVSTNF 494 +L S FFS ++LA + YS F N SF D T+F Sbjct: 6 ILLSLFFSFERLLTLANANSLYSPFNNSSFVDSDTSF 42 >SPBC342.01c |alg6|SPBC3F6.06c|glucosyltransferase Alg6|Schizosaccharomyces pombe|chr 2|||Manual Length = 506 Score = 28.7 bits (61), Expect = 0.79 Identities = 14/34 (41%), Positives = 20/34 (58%) Frame = +3 Query: 99 IGDSGVGKTSILFRFSEDAFNISFISTIGIDFKI 200 IGD V ++LFRF + +F + I +GID I Sbjct: 423 IGDMVVFSKNVLFRFIQLSFYVGMIVILGIDLFI 456 >SPBC337.13c |gtr1||Gtr1/RagA G protein Gtr1|Schizosaccharomyces pombe|chr 2|||Manual Length = 308 Score = 28.7 bits (61), Expect = 0.79 Identities = 33/110 (30%), Positives = 48/110 (43%), Gaps = 6/110 (5%) Frame = +3 Query: 87 KLLLIGDSGVGKTSIL-FRFSEDAFNISFISTIGIDFKIRTIDLDGKKVKLQIWDTAGQE 263 K+LL+G SG GK+S+ FS + ID + + G V L +WD GQE Sbjct: 4 KVLLMGRSGSGKSSMRSIVFSNYVAKDTRRLGATIDIEHSHVRFLGNLV-LNLWDCGGQE 62 Query: 264 RF-RTITTA----YYRGSMGIMLVYDVTNEKSFENIKNWIRNIEENASAD 398 F +A +R ++ V+DV + FE RN E A+ Sbjct: 63 AFMENYLSAQRDHIFRNVQVLIYVFDV-ESREFERDLVTFRNCLEATVAN 111 >SPAC11D3.15 |||oxoprolinase |Schizosaccharomyces pombe|chr 1|||Manual Length = 1317 Score = 27.1 bits (57), Expect = 2.4 Identities = 11/38 (28%), Positives = 23/38 (60%) Frame = +3 Query: 306 GIMLVYDVTNEKSFENIKNWIRNIEENASADVEKMILG 419 GI L+ + E ++ +++ I+ENA + V +++LG Sbjct: 947 GINLITSLIKEYGKNSVLRYMKAIQENAESAVRQLLLG 984 >SPAC27D7.08c |||DUF890 family protein|Schizosaccharomyces pombe|chr 1|||Manual Length = 385 Score = 26.2 bits (55), Expect = 4.2 Identities = 13/31 (41%), Positives = 20/31 (64%), Gaps = 1/31 (3%) Frame = -2 Query: 603 DYSLPVSFPFSLLCPWLKCK-MHIQHLTSLL 514 DYSL V FP + LCP + + +I+++ LL Sbjct: 35 DYSLRVEFPENRLCPMVPNRATYIRYIHDLL 65 >SPAC19D5.04 |ptr1||HECT domain|Schizosaccharomyces pombe|chr 1|||Manual Length = 3227 Score = 26.2 bits (55), Expect = 4.2 Identities = 10/21 (47%), Positives = 14/21 (66%) Frame = -3 Query: 311 NSHRTTVVCCCYCTESLLTSS 249 +SH+T++VC Y E LL S Sbjct: 1331 DSHKTSIVCILYLLEVLLADS 1351 >SPAC31A2.12 |||arrestin/PY protein 1|Schizosaccharomyces pombe|chr 1|||Manual Length = 596 Score = 26.2 bits (55), Expect = 4.2 Identities = 10/23 (43%), Positives = 14/23 (60%) Frame = +3 Query: 570 AKMEKKQEASNPSGGRSGVHKPT 638 A + +ASNP+G S H+PT Sbjct: 546 ASLAHLSQASNPNGSSSAPHRPT 568 >SPAC9G1.11c |spn4||septin Spn4|Schizosaccharomyces pombe|chr 1|||Manual Length = 380 Score = 25.8 bits (54), Expect = 5.6 Identities = 19/61 (31%), Positives = 34/61 (55%) Frame = +3 Query: 84 FKLLLIGDSGVGKTSILFRFSEDAFNISFISTIGIDFKIRTIDLDGKKVKLQIWDTAGQE 263 F L+L G+SG+GKT+ F F+ + S +G + K+R + K V+++I +E Sbjct: 29 FTLMLCGESGLGKTT----FCNTLFSTTIKSHMGPE-KVRAKHAE-KTVEIEITKAELEE 82 Query: 264 R 266 + Sbjct: 83 K 83 >SPBC83.07 |jmj3||Lid2 complex subunit Jmj3|Schizosaccharomyces pombe|chr 2|||Manual Length = 752 Score = 25.8 bits (54), Expect = 5.6 Identities = 12/26 (46%), Positives = 15/26 (57%) Frame = -1 Query: 151 SSENLNSIDVFPTPESPIRSNLNKQS 74 SSE +S+DV PTP + NL S Sbjct: 617 SSEPTSSVDVAPTPVEDVNVNLESIS 642 >SPBC25B2.01 ||SPBC2G5.08|elongation factor 1 alpha related protein|Schizosaccharomyces pombe|chr 2|||Manual Length = 592 Score = 25.8 bits (54), Expect = 5.6 Identities = 16/58 (27%), Positives = 33/58 (56%), Gaps = 1/58 (1%) Frame = +3 Query: 222 KKVKLQIWDTAGQERFRTITTAYYRGSMGI-MLVYDVTNEKSFENIKNWIRNIEENAS 392 K ++L I D R T+T G++ + ++YDV++++ +KN IRN + +++ Sbjct: 403 KPLRLSIDDVYRSPRSVTVTGRVEAGNVQVNQVLYDVSSQED-AYVKNVIRNSDPSST 459 >SPAC23A1.05 |||sequence orphan|Schizosaccharomyces pombe|chr 1|||Manual Length = 101 Score = 25.0 bits (52), Expect = 9.7 Identities = 8/16 (50%), Positives = 12/16 (75%) Frame = +3 Query: 42 NQIVVKMAKTYDCLFK 89 N +V+K K YDC+F+ Sbjct: 3 NPVVIKAKKDYDCVFE 18 Database: spombe Posted date: Oct 4, 2007 10:57 AM Number of letters in database: 2,362,478 Number of sequences in database: 5004 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 2,786,032 Number of Sequences: 5004 Number of extensions: 58377 Number of successful extensions: 239 Number of sequences better than 10.0: 33 Number of HSP's better than 10.0 without gapping: 216 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 225 length of database: 2,362,478 effective HSP length: 70 effective length of database: 2,012,198 effective search space used: 301829700 frameshift window, decay const: 40, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 41 (21.7 bits)
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