Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= brS-1250
(727 letters)
Database: tribolium
336 sequences; 122,585 total letters
Searching.......................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY052625-1|AAL15473.1| 135|Tribolium castaneum tryptophan oxyge... 23 1.9
AY052392-1|AAL15466.1| 388|Tribolium castaneum tryptophan oxyge... 23 1.9
AY052390-1|AAL15464.1| 388|Tribolium castaneum tryptophan oxyge... 23 1.9
DQ414247-1|ABD63009.2| 414|Tribolium castaneum paired protein. 23 3.3
AY043293-2|AAK96034.1| 353|Tribolium castaneum homeodomain tran... 23 3.3
AF230313-1|AAF64147.1| 210|Tribolium castaneum labial protein p... 23 3.3
AF230312-1|AAF64146.1| 253|Tribolium castaneum labial protein p... 23 3.3
DQ157471-1|AAZ85125.1| 1639|Tribolium castaneum Down Syndrome ad... 22 4.4
AY884062-1|AAX84203.1| 712|Tribolium castaneum laccase 2B protein. 22 4.4
AY884061-1|AAX84202.1| 717|Tribolium castaneum laccase 2A protein. 22 5.8
AY800247-1|AAV66724.1| 790|Tribolium castaneum pangolin protein. 22 5.8
AY052394-1|AAL15468.1| 228|Tribolium castaneum tryptophan oxyge... 22 5.8
>AY052625-1|AAL15473.1| 135|Tribolium castaneum tryptophan
oxygenase protein.
Length = 135
Score = 23.4 bits (48), Expect = 1.9
Identities = 8/19 (42%), Positives = 15/19 (78%)
Frame = -1
Query: 217 SKVFGDDDIEVNEVKKTDK 161
SKVFG+D+ + ++ K++K
Sbjct: 100 SKVFGNDEKALEQIAKSEK 118
>AY052392-1|AAL15466.1| 388|Tribolium castaneum tryptophan
oxygenase protein.
Length = 388
Score = 23.4 bits (48), Expect = 1.9
Identities = 8/19 (42%), Positives = 15/19 (78%)
Frame = -1
Query: 217 SKVFGDDDIEVNEVKKTDK 161
SKVFG+D+ + ++ K++K
Sbjct: 160 SKVFGNDEKALEQIAKSEK 178
>AY052390-1|AAL15464.1| 388|Tribolium castaneum tryptophan
oxygenase protein.
Length = 388
Score = 23.4 bits (48), Expect = 1.9
Identities = 8/19 (42%), Positives = 15/19 (78%)
Frame = -1
Query: 217 SKVFGDDDIEVNEVKKTDK 161
SKVFG+D+ + ++ K++K
Sbjct: 160 SKVFGNDEKALEQIAKSEK 178
>DQ414247-1|ABD63009.2| 414|Tribolium castaneum paired protein.
Length = 414
Score = 22.6 bits (46), Expect = 3.3
Identities = 12/40 (30%), Positives = 17/40 (42%)
Frame = +3
Query: 540 RRKLSFRMLSSWYCRNLRRCRSSICK*ATERVE*ARPDRH 659
R KL+ + W+ R R I AT V P+R+
Sbjct: 256 RTKLTEARIQVWFSNRRARLRKQITSAATPLVRSYAPERY 295
>AY043293-2|AAK96034.1| 353|Tribolium castaneum homeodomain
transcription factor Labialprotein.
Length = 353
Score = 22.6 bits (46), Expect = 3.3
Identities = 7/22 (31%), Positives = 14/22 (63%)
Frame = -3
Query: 563 HSEA*LPPPNALHPYYLWVEIK 498
H+ + +P P + P Y W+++K
Sbjct: 182 HNLSSVPQPQPVLPTYKWMQVK 203
>AF230313-1|AAF64147.1| 210|Tribolium castaneum labial protein
protein.
Length = 210
Score = 22.6 bits (46), Expect = 3.3
Identities = 7/22 (31%), Positives = 14/22 (63%)
Frame = -3
Query: 563 HSEA*LPPPNALHPYYLWVEIK 498
H+ + +P P + P Y W+++K
Sbjct: 182 HNLSSVPQPQPVLPTYKWMQVK 203
>AF230312-1|AAF64146.1| 253|Tribolium castaneum labial protein
protein.
Length = 253
Score = 22.6 bits (46), Expect = 3.3
Identities = 7/22 (31%), Positives = 14/22 (63%)
Frame = -3
Query: 563 HSEA*LPPPNALHPYYLWVEIK 498
H+ + +P P + P Y W+++K
Sbjct: 182 HNLSSVPQPQPVLPTYKWMQVK 203
>DQ157471-1|AAZ85125.1| 1639|Tribolium castaneum Down Syndrome
adhesion molecule splicevariant 3.12.3.1 protein.
Length = 1639
Score = 22.2 bits (45), Expect = 4.4
Identities = 10/31 (32%), Positives = 16/31 (51%)
Frame = -1
Query: 409 TNVSTYKSDAGVETIKLELQENLISWISNGV 317
T +TYK D + + + L +I+W GV
Sbjct: 1315 TFTTTYKEDVTLPCLAVGLPPPVITWKIKGV 1345
>AY884062-1|AAX84203.1| 712|Tribolium castaneum laccase 2B protein.
Length = 712
Score = 22.2 bits (45), Expect = 4.4
Identities = 9/19 (47%), Positives = 14/19 (73%)
Frame = +2
Query: 509 PINNMGEVHLAEEVKLPNV 565
P+N + EV L +EV+ PN+
Sbjct: 575 PLNAIVEVVLVDEVQSPNL 593
>AY884061-1|AAX84202.1| 717|Tribolium castaneum laccase 2A protein.
Length = 717
Score = 21.8 bits (44), Expect = 5.8
Identities = 8/19 (42%), Positives = 14/19 (73%)
Frame = +2
Query: 509 PINNMGEVHLAEEVKLPNV 565
P+N + E+ L +EV+ PN+
Sbjct: 575 PLNAIVEIVLVDEVQQPNL 593
>AY800247-1|AAV66724.1| 790|Tribolium castaneum pangolin protein.
Length = 790
Score = 21.8 bits (44), Expect = 5.8
Identities = 8/17 (47%), Positives = 10/17 (58%)
Frame = -2
Query: 678 YLYRNGGAGPVELIQLS 628
Y Y NG AGP+ + S
Sbjct: 94 YSYANGAAGPIPVSMAS 110
>AY052394-1|AAL15468.1| 228|Tribolium castaneum tryptophan
oxygenase protein.
Length = 228
Score = 21.8 bits (44), Expect = 5.8
Identities = 7/18 (38%), Positives = 14/18 (77%)
Frame = -1
Query: 214 KVFGDDDIEVNEVKKTDK 161
KVFG+D+ + ++ K++K
Sbjct: 1 KVFGNDEKALEQIAKSEK 18
Database: tribolium
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 122,585
Number of sequences in database: 336
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 165,906
Number of Sequences: 336
Number of extensions: 3306
Number of successful extensions: 14
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 14
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 14
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 19363530
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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