Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= brS-1249
(360 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_Q5MCG5 Cluster: Mitochondrial ATP synthase beta subunit... 95 3e-19
UniRef50_P06576 Cluster: ATP synthase subunit beta, mitochondria... 89 3e-17
UniRef50_P00830 Cluster: ATP synthase subunit beta, mitochondria... 75 3e-13
UniRef50_Q92LK8 Cluster: ATP synthase subunit beta; n=32; cellul... 74 7e-13
UniRef50_Q9C5A9 Cluster: ATP synthase subunit beta-3, mitochondr... 74 9e-13
UniRef50_Q5NQY9 Cluster: ATP synthase subunit beta; n=169; cellu... 72 3e-12
UniRef50_Q5FRC5 Cluster: ATP synthase subunit beta; n=266; cellu... 66 2e-10
UniRef50_A1ZPD5 Cluster: ATP synthase F1, beta subunit; n=4; Bac... 59 2e-08
UniRef50_Q9RQ79 Cluster: Beta subunit of membrane-bound ATP synt... 56 2e-07
UniRef50_A6DUD8 Cluster: F0F1 ATP synthase subunit beta; n=1; Le... 54 6e-07
UniRef50_P13356 Cluster: ATP synthase subunit beta; n=5; Bactero... 53 1e-06
UniRef50_Q9RQ76 Cluster: Beta subunit of membrane-bound ATP synt... 52 3e-06
UniRef50_O50341 Cluster: ATP synthase subunit beta; n=23; cellul... 50 1e-05
UniRef50_Q1NYL2 Cluster: ATP synthase beta chain; n=1; Candidatu... 48 4e-05
UniRef50_A3TUV5 Cluster: Putative uncharacterized protein; n=3; ... 46 2e-04
UniRef50_A3L181 Cluster: ATP synthase beta chain; n=3; Gammaprot... 42 0.003
UniRef50_Q93UD9 Cluster: ATP synthase beta subunit; n=12; Candid... 40 0.013
UniRef50_A5IFJ3 Cluster: ATP synthase F1, beta chain; n=3; Legio... 36 0.16
UniRef50_A7DHD2 Cluster: Putative uncharacterized protein; n=1; ... 36 0.28
UniRef50_Q2LAJ4 Cluster: Auxin response factor 3; n=2; core eudi... 34 0.86
UniRef50_A7QPQ9 Cluster: Chromosome chr10 scaffold_138, whole ge... 33 1.1
UniRef50_UPI00006CBEC0 Cluster: hypothetical protein TTHERM_0030... 32 2.6
UniRef50_A0NYQ3 Cluster: MutT/nudix family protein; n=1; Stappia... 32 3.5
UniRef50_A7SZC5 Cluster: Predicted protein; n=1; Nematostella ve... 32 3.5
UniRef50_Q6AJ97 Cluster: Putative uncharacterized protein; n=1; ... 31 6.1
UniRef50_Q5LTC2 Cluster: Branched-chain amino acid ABC transport... 31 6.1
UniRef50_Q3JBF4 Cluster: Glucokinase; n=1; Nitrosococcus oceani ... 31 6.1
UniRef50_Q9LCZ9 Cluster: Photoassimilate-responsive protein PAR-... 31 6.1
UniRef50_A2DHB8 Cluster: LOC300675 protein, putative; n=3; Trich... 31 6.1
UniRef50_Q67MQ0 Cluster: Putative uncharacterized protein; n=1; ... 31 8.0
UniRef50_A0HLA3 Cluster: Putative uncharacterized protein; n=1; ... 31 8.0
>UniRef50_Q5MCG5 Cluster: Mitochondrial ATP synthase beta subunit;
n=1; Mesenchytraeus solifugus|Rep: Mitochondrial ATP
synthase beta subunit - Mesenchytraeus solifugus
(glacier ice worm)
Length = 136
Score = 95.1 bits (226), Expect = 3e-19
Identities = 44/49 (89%), Positives = 46/49 (93%)
Frame = +1
Query: 166 DVQFEDNLPPILNALEVQNRSPRLVLEVAQHLGENTVRTIAMDGTEGLV 312
DVQF+D LPPILNALEV NR PRL+LEVAQHLGENTVRTIAMDGTEGLV
Sbjct: 71 DVQFDDELPPILNALEVANRKPRLILEVAQHLGENTVRTIAMDGTEGLV 119
>UniRef50_P06576 Cluster: ATP synthase subunit beta, mitochondrial
precursor; n=3027; cellular organisms|Rep: ATP synthase
subunit beta, mitochondrial precursor - Homo sapiens
(Human)
Length = 529
Score = 88.6 bits (210), Expect = 3e-17
Identities = 42/49 (85%), Positives = 45/49 (91%)
Frame = +1
Query: 166 DVQFEDNLPPILNALEVQNRSPRLVLEVAQHLGENTVRTIAMDGTEGLV 312
DVQF++ LPPILNALEVQ R RLVLEVAQHLGE+TVRTIAMDGTEGLV
Sbjct: 72 DVQFDEGLPPILNALEVQGRETRLVLEVAQHLGESTVRTIAMDGTEGLV 120
>UniRef50_P00830 Cluster: ATP synthase subunit beta, mitochondrial
precursor; n=14; cellular organisms|Rep: ATP synthase
subunit beta, mitochondrial precursor - Saccharomyces
cerevisiae (Baker's yeast)
Length = 511
Score = 75.4 bits (177), Expect = 3e-13
Identities = 38/50 (76%), Positives = 42/50 (84%), Gaps = 1/50 (2%)
Frame = +1
Query: 166 DVQFEDN-LPPILNALEVQNRSPRLVLEVAQHLGENTVRTIAMDGTEGLV 312
DV FE + LP ILNALE++ +LVLEVAQHLGENTVRTIAMDGTEGLV
Sbjct: 55 DVHFEQSELPAILNALEIKTPQGKLVLEVAQHLGENTVRTIAMDGTEGLV 104
>UniRef50_Q92LK8 Cluster: ATP synthase subunit beta; n=32; cellular
organisms|Rep: ATP synthase subunit beta - Rhizobium
meliloti (Sinorhizobium meliloti)
Length = 504
Score = 74.1 bits (174), Expect = 7e-13
Identities = 38/50 (76%), Positives = 40/50 (80%), Gaps = 1/50 (2%)
Frame = +1
Query: 166 DVQFEDN-LPPILNALEVQNRSPRLVLEVAQHLGENTVRTIAMDGTEGLV 312
DV FE+ LP ILNALE N RLVLEVAQHLGEN+VRTIAMD TEGLV
Sbjct: 47 DVAFEEGQLPQILNALETDNNGNRLVLEVAQHLGENSVRTIAMDSTEGLV 96
>UniRef50_Q9C5A9 Cluster: ATP synthase subunit beta-3, mitochondrial
precursor; n=1793; root|Rep: ATP synthase subunit
beta-3, mitochondrial precursor - Arabidopsis thaliana
(Mouse-ear cress)
Length = 559
Score = 73.7 bits (173), Expect = 9e-13
Identities = 36/51 (70%), Positives = 42/51 (82%), Gaps = 2/51 (3%)
Frame = +1
Query: 166 DVQFEDN--LPPILNALEVQNRSPRLVLEVAQHLGENTVRTIAMDGTEGLV 312
DV+FED LPPI+ +LEVQ+ RLVLEV+ HLG+N VRTIAMDGTEGLV
Sbjct: 98 DVRFEDQEGLPPIMTSLEVQDHPTRLVLEVSHHLGQNVVRTIAMDGTEGLV 148
>UniRef50_Q5NQY9 Cluster: ATP synthase subunit beta; n=169; cellular
organisms|Rep: ATP synthase subunit beta - Zymomonas
mobilis
Length = 484
Score = 72.1 bits (169), Expect = 3e-12
Identities = 33/49 (67%), Positives = 40/49 (81%)
Frame = +1
Query: 166 DVQFEDNLPPILNALEVQNRSPRLVLEVAQHLGENTVRTIAMDGTEGLV 312
DV FE+ LPP+L ALE +N+ +VLEVAQHLGEN VRTI+MD T+GLV
Sbjct: 22 DVLFEEKLPPLLTALETKNQDATVVLEVAQHLGENVVRTISMDTTDGLV 70
>UniRef50_Q5FRC5 Cluster: ATP synthase subunit beta; n=266; cellular
organisms|Rep: ATP synthase subunit beta - Gluconobacter
oxydans (Gluconobacter suboxydans)
Length = 487
Score = 65.7 bits (153), Expect = 2e-10
Identities = 34/49 (69%), Positives = 37/49 (75%)
Frame = +1
Query: 166 DVQFEDNLPPILNALEVQNRSPRLVLEVAQHLGENTVRTIAMDGTEGLV 312
DVQFE +LP ILNAL VQN LVLEVAQ +GE VR IAMD T+GLV
Sbjct: 28 DVQFEGDLPFILNALHVQNGDHTLVLEVAQEIGERQVRCIAMDTTDGLV 76
>UniRef50_A1ZPD5 Cluster: ATP synthase F1, beta subunit; n=4;
Bacteroidetes|Rep: ATP synthase F1, beta subunit -
Microscilla marina ATCC 23134
Length = 505
Score = 59.3 bits (137), Expect = 2e-08
Identities = 33/52 (63%), Positives = 39/52 (75%), Gaps = 4/52 (7%)
Frame = +1
Query: 166 DVQFED---NLPPILNALEVQNRSPRLV-LEVAQHLGENTVRTIAMDGTEGL 309
DV F D +LP ILNALEV + ++V LE QHLGE+TVRTIAM+GTEGL
Sbjct: 16 DVSFTDEKSHLPKILNALEVTKENGQVVILECQQHLGEDTVRTIAMEGTEGL 67
>UniRef50_Q9RQ79 Cluster: Beta subunit of membrane-bound ATP
synthase; n=8; cellular organisms|Rep: Beta subunit of
membrane-bound ATP synthase - Buchnera aphidicola
Length = 147
Score = 55.6 bits (128), Expect = 2e-07
Identities = 28/49 (57%), Positives = 35/49 (71%), Gaps = 1/49 (2%)
Frame = +1
Query: 166 DVQFEDN-LPPILNALEVQNRSPRLVLEVAQHLGENTVRTIAMDGTEGL 309
DV+F N +P I NALEVQN+ +L+LEV Q LG VRTIAM ++GL
Sbjct: 15 DVEFNQNSVPKIYNALEVQNKYHKLILEVQQQLGAGIVRTIAMGSSDGL 63
>UniRef50_A6DUD8 Cluster: F0F1 ATP synthase subunit beta; n=1;
Lentisphaera araneosa HTCC2155|Rep: F0F1 ATP synthase
subunit beta - Lentisphaera araneosa HTCC2155
Length = 161
Score = 54.4 bits (125), Expect = 6e-07
Identities = 32/54 (59%), Positives = 36/54 (66%), Gaps = 6/54 (11%)
Frame = +1
Query: 166 DVQFEDN-LPPILNALEVQNRS-----PRLVLEVAQHLGENTVRTIAMDGTEGL 309
DV+F +P I NAL+V N S LVLEVAQHLGE VRTIA+D TEGL
Sbjct: 18 DVEFSGGTIPGIFNALKVTNPSINDQEGNLVLEVAQHLGEGVVRTIALDSTEGL 71
>UniRef50_P13356 Cluster: ATP synthase subunit beta; n=5;
Bacteroides|Rep: ATP synthase subunit beta - Bacteroides
fragilis
Length = 505
Score = 53.2 bits (122), Expect = 1e-06
Identities = 24/42 (57%), Positives = 34/42 (80%), Gaps = 1/42 (2%)
Frame = +1
Query: 187 LPPILNALEVQNRS-PRLVLEVAQHLGENTVRTIAMDGTEGL 309
LP I +ALE++ + +L++EV QH+GENTVRT+AMD T+GL
Sbjct: 29 LPSIHDALEIKRHNGKKLIVEVQQHIGENTVRTVAMDSTDGL 70
>UniRef50_Q9RQ76 Cluster: Beta subunit of membrane-bound ATP
synthase; n=16; Gammaproteobacteria|Rep: Beta subunit of
membrane-bound ATP synthase - Buchnera aphidicola
Length = 147
Score = 52.0 bits (119), Expect = 3e-06
Identities = 26/49 (53%), Positives = 34/49 (69%), Gaps = 1/49 (2%)
Frame = +1
Query: 166 DVQFEDN-LPPILNALEVQNRSPRLVLEVAQHLGENTVRTIAMDGTEGL 309
DV+F N +P I NAL VQNR+ +++LEV Q G VRTIAM ++GL
Sbjct: 15 DVEFPYNSVPKIYNALSVQNRNQKIILEVQQQPGSGVVRTIAMGASDGL 63
>UniRef50_O50341 Cluster: ATP synthase subunit beta; n=23; cellular
organisms|Rep: ATP synthase subunit beta -
Fervidobacterium islandicum
Length = 472
Score = 50.0 bits (114), Expect = 1e-05
Identities = 27/52 (51%), Positives = 38/52 (73%), Gaps = 3/52 (5%)
Frame = +1
Query: 166 DVQFED-NLPPILNALEVQN--RSPRLVLEVAQHLGENTVRTIAMDGTEGLV 312
DV+F++ +LP I +AL V N +L+LEV Q +G+N VRT+AMD T+GLV
Sbjct: 18 DVKFQEGDLPDIYDALVVINPQTGKKLILEVEQLIGDNIVRTVAMDSTDGLV 69
>UniRef50_Q1NYL2 Cluster: ATP synthase beta chain; n=1; Candidatus
Sulcia muelleri str. Hc (Homalodisca coagulata)|Rep: ATP
synthase beta chain - Candidatus Sulcia muelleri str. Hc
(Homalodisca coagulata)
Length = 129
Score = 48.4 bits (110), Expect = 4e-05
Identities = 27/51 (52%), Positives = 38/51 (74%), Gaps = 3/51 (5%)
Frame = +1
Query: 166 DVQFED--NLPPILNALEVQN-RSPRLVLEVAQHLGENTVRTIAMDGTEGL 309
DV FE+ +LP I ++LEV N + +++LEV QH+GE TVR I+MD T+GL
Sbjct: 22 DVLFENVSSLPMIYDSLEVFNPKGNQIILEVQQHIGECTVRCISMDITDGL 72
>UniRef50_A3TUV5 Cluster: Putative uncharacterized protein; n=3;
Alphaproteobacteria|Rep: Putative uncharacterized
protein - Oceanicola batsensis HTCC2597
Length = 620
Score = 46.4 bits (105), Expect = 2e-04
Identities = 28/85 (32%), Positives = 45/85 (52%)
Frame = -1
Query: 312 D*AFSTVHGNGPNCVLTQMLGYLKYEAGRSILHLKGI*NRRQVIFELHIYHSTDNGNNLT 133
D F VH +G + VLT++L + + + G ++ + + + RQVI ELH+++ D+ +
Sbjct: 417 DQTFGRVHRDGAHGVLTKVLRHFQNQLGAVVVGGQCVEDLRQVIVELHVHNGADDLGHSA 476
Query: 132 LAFSCRFSSIVPLVNGIDCNDFSTF 58
C SS VPL NDF F
Sbjct: 477 FCV-CHVSSPVPLERFRARNDFDQF 500
>UniRef50_A3L181 Cluster: ATP synthase beta chain; n=3;
Gammaproteobacteria|Rep: ATP synthase beta chain -
Pseudomonas aeruginosa C3719
Length = 154
Score = 41.9 bits (94), Expect = 0.003
Identities = 25/49 (51%), Positives = 30/49 (61%), Gaps = 1/49 (2%)
Frame = +1
Query: 166 DVQF-EDNLPPILNALEVQNRSPRLVLEVAQHLGENTVRTIAMDGTEGL 309
DV+F D +P I AL+VQ LEV Q LG+ VR+IAM TEGL
Sbjct: 15 DVEFPRDAVPSIYEALKVQG--VETTLEVQQQLGDGVVRSIAMGSTEGL 61
>UniRef50_Q93UD9 Cluster: ATP synthase beta subunit; n=12;
Candidatus Carsonella ruddii|Rep: ATP synthase beta
subunit - Carsonella ruddii
Length = 139
Score = 39.9 bits (89), Expect = 0.013
Identities = 21/49 (42%), Positives = 32/49 (65%), Gaps = 1/49 (2%)
Frame = +1
Query: 166 DVQFED-NLPPILNALEVQNRSPRLVLEVAQHLGENTVRTIAMDGTEGL 309
D++F+ N+P I NAL + +++ + LEV Q +G+N VR IA T GL
Sbjct: 14 DIEFKKKNIPKIYNALFIPDKN--IFLEVQQQIGKNIVRVIAFGDTNGL 60
>UniRef50_A5IFJ3 Cluster: ATP synthase F1, beta chain; n=3;
Legionella pneumophila|Rep: ATP synthase F1, beta chain
- Legionella pneumophila (strain Corby)
Length = 474
Score = 36.3 bits (80), Expect = 0.16
Identities = 17/41 (41%), Positives = 23/41 (56%)
Frame = +1
Query: 187 LPPILNALEVQNRSPRLVLEVAQHLGENTVRTIAMDGTEGL 309
LPP+ +L+ S +LEV QHL E+ VR I + GL
Sbjct: 42 LPPLHQSLKTYTDSDEYILEVCQHLDEHHVRAITLHRASGL 82
>UniRef50_A7DHD2 Cluster: Putative uncharacterized protein; n=1;
Methylobacterium extorquens PA1|Rep: Putative
uncharacterized protein - Methylobacterium extorquens
PA1
Length = 945
Score = 35.5 bits (78), Expect = 0.28
Identities = 18/55 (32%), Positives = 32/55 (58%)
Frame = -1
Query: 294 VHGNGPNCVLTQMLGYLKYEAGRSILHLKGI*NRRQVIFELHIYHSTDNGNNLTL 130
VH + + VLT++L + EA + L+ + + RQV+ ELH++ D+ +L L
Sbjct: 511 VHRDAADSVLTELLRDFENEAAALVPGLERVQDFRQVVVELHVHDGADDLGDLAL 565
>UniRef50_Q2LAJ4 Cluster: Auxin response factor 3; n=2; core
eudicotyledons|Rep: Auxin response factor 3 - Solanum
lycopersicum (Tomato) (Lycopersicon esculentum)
Length = 747
Score = 33.9 bits (74), Expect = 0.86
Identities = 17/40 (42%), Positives = 25/40 (62%), Gaps = 1/40 (2%)
Frame = -3
Query: 271 CSHPNVGLPQVRGGEIDFAPQGHLESEAGYLRIA-HLPQH 155
C+ P + LP+ +G + + PQGHLE + Y IA +LP H
Sbjct: 60 CAGPLISLPK-KGSAVVYLPQGHLEHLSEYPSIACNLPPH 98
>UniRef50_A7QPQ9 Cluster: Chromosome chr10 scaffold_138, whole
genome shotgun sequence; n=2; Vitis vinifera|Rep:
Chromosome chr10 scaffold_138, whole genome shotgun
sequence - Vitis vinifera (Grape)
Length = 737
Score = 33.5 bits (73), Expect = 1.1
Identities = 16/40 (40%), Positives = 25/40 (62%), Gaps = 1/40 (2%)
Frame = -3
Query: 271 CSHPNVGLPQVRGGEIDFAPQGHLESEAGYLRIAH-LPQH 155
C+ P + LP+ +G + + PQGHLE + Y +A+ LP H
Sbjct: 51 CAGPLISLPK-KGSLVVYFPQGHLEQLSDYPAVAYDLPPH 89
>UniRef50_UPI00006CBEC0 Cluster: hypothetical protein
TTHERM_00304130; n=1; Tetrahymena thermophila SB210|Rep:
hypothetical protein TTHERM_00304130 - Tetrahymena
thermophila SB210
Length = 161
Score = 32.3 bits (70), Expect = 2.6
Identities = 16/31 (51%), Positives = 20/31 (64%)
Frame = +1
Query: 181 DNLPPILNALEVQNRSPRLVLEVAQHLGENT 273
D L + N L+ QNR +VLEVAQ L +NT
Sbjct: 130 DKLKNLPNYLDRQNRFQNIVLEVAQDLNQNT 160
>UniRef50_A0NYQ3 Cluster: MutT/nudix family protein; n=1; Stappia
aggregata IAM 12614|Rep: MutT/nudix family protein -
Stappia aggregata IAM 12614
Length = 216
Score = 31.9 bits (69), Expect = 3.5
Identities = 19/39 (48%), Positives = 22/39 (56%), Gaps = 3/39 (7%)
Frame = -1
Query: 324 GCPRD*AFS---TVHGNGPNCVLTQMLGYLKYEAGRSIL 217
G PRD A G+GPN VLTQ G+LK AG+ L
Sbjct: 52 GPPRDAAVLIGIVERGDGPNVVLTQRTGHLKSHAGQVAL 90
>UniRef50_A7SZC5 Cluster: Predicted protein; n=1; Nematostella
vectensis|Rep: Predicted protein - Nematostella
vectensis
Length = 216
Score = 31.9 bits (69), Expect = 3.5
Identities = 20/58 (34%), Positives = 31/58 (53%), Gaps = 1/58 (1%)
Frame = -1
Query: 276 NCVLTQMLGYLKYEAGRSILHLKGI*NRRQVIFEL-HIYHSTDNGNNLTLAFSCRFSS 106
NC+L + GYLK ++ I++ G QV++ L +Y S + GNNL F +S
Sbjct: 48 NCLLWTIYGYLKDDSTIIIVNFVGA--LLQVVYILCFLYFSRERGNNLAFLFYSAIAS 103
>UniRef50_Q6AJ97 Cluster: Putative uncharacterized protein; n=1;
Desulfotalea psychrophila|Rep: Putative uncharacterized
protein - Desulfotalea psychrophila
Length = 515
Score = 31.1 bits (67), Expect = 6.1
Identities = 12/33 (36%), Positives = 17/33 (51%)
Frame = -3
Query: 322 LPTGLSLQYRPWQWSELCSHPNVGLPQVRGGEI 224
+ T + + PW WS L +H N L Q+ G I
Sbjct: 239 IQTMVQIVSAPWNWSSLLAHANPTLEQIAGSRI 271
>UniRef50_Q5LTC2 Cluster: Branched-chain amino acid ABC transporter,
permease/ATP-binding protein; n=1; Silicibacter
pomeroyi|Rep: Branched-chain amino acid ABC transporter,
permease/ATP-binding protein - Silicibacter pomeroyi
Length = 582
Score = 31.1 bits (67), Expect = 6.1
Identities = 19/59 (32%), Positives = 28/59 (47%)
Frame = -3
Query: 301 QYRPWQWSELCSHPNVGLPQVRGGEIDFAPQGHLESEAGYLRIAHLPQHR*RQQPYLGL 125
++R S+L HP+V L + +D PQGH + + IA PQ +P GL
Sbjct: 452 RWRSRSLSDLLDHPSVPLKEELVEPVDHLPQGHRQFLEYAMTIAAEPQVLLLDEPCAGL 510
>UniRef50_Q3JBF4 Cluster: Glucokinase; n=1; Nitrosococcus oceani
ATCC 19707|Rep: Glucokinase - Nitrosococcus oceani
(strain ATCC 19707 / NCIMB 11848)
Length = 335
Score = 31.1 bits (67), Expect = 6.1
Identities = 20/43 (46%), Positives = 22/43 (51%)
Frame = -3
Query: 325 GLPTGLSLQYRPWQWSELCSHPNVGLPQVRGGEIDFAPQGHLE 197
G TGL WQ E H V LP GG +DFAPQG L+
Sbjct: 137 GAGTGLGQALLVWQ--EQTGHYQV-LP-TEGGHVDFAPQGKLQ 175
>UniRef50_Q9LCZ9 Cluster: Photoassimilate-responsive protein
PAR-1b-like protein; n=3; core eudicotyledons|Rep:
Photoassimilate-responsive protein PAR-1b-like protein -
Arabidopsis thaliana (Mouse-ear cress)
Length = 183
Score = 31.1 bits (67), Expect = 6.1
Identities = 17/44 (38%), Positives = 24/44 (54%)
Frame = +1
Query: 181 DNLPPILNALEVQNRSPRLVLEVAQHLGENTVRTIAMDGTEGLV 312
+NLP + + + R +LE A GE T RT A+D EG+V
Sbjct: 29 ENLPTNMCSFSISASGKRCILETANVAGEFTCRTSAVD-VEGIV 71
>UniRef50_A2DHB8 Cluster: LOC300675 protein, putative; n=3;
Trichomonas vaginalis G3|Rep: LOC300675 protein,
putative - Trichomonas vaginalis G3
Length = 368
Score = 31.1 bits (67), Expect = 6.1
Identities = 16/36 (44%), Positives = 24/36 (66%)
Frame = +2
Query: 29 LNQLLRNPFQNVEKSLQSMPLTRGTMLLNLQEKAKV 136
LN+LL + +EK+LQS+PL M L ++E AK+
Sbjct: 284 LNELLVEWPEALEKALQSIPLPSADMDLTIEEYAKI 319
>UniRef50_Q67MQ0 Cluster: Putative uncharacterized protein; n=1;
Symbiobacterium thermophilum|Rep: Putative
uncharacterized protein - Symbiobacterium thermophilum
Length = 260
Score = 30.7 bits (66), Expect = 8.0
Identities = 10/23 (43%), Positives = 16/23 (69%)
Frame = -3
Query: 298 YRPWQWSELCSHPNVGLPQVRGG 230
Y P QW++LC +VG+ + +GG
Sbjct: 8 YVPLQWTKLCQRSDVGMSKAKGG 30
>UniRef50_A0HLA3 Cluster: Putative uncharacterized protein; n=1;
Comamonas testosteroni KF-1|Rep: Putative
uncharacterized protein - Comamonas testosteroni KF-1
Length = 534
Score = 30.7 bits (66), Expect = 8.0
Identities = 18/63 (28%), Positives = 31/63 (49%), Gaps = 1/63 (1%)
Frame = -1
Query: 306 AFSTVHGNGPNCVLTQMLGYLKYEAGRSILHLKGI*NRRQV-IFELHIYHSTDNGNNLTL 130
A GNG + + Q+L L ++ L+G+ + + + +LH++H D NNL L
Sbjct: 447 AVGRTQGNGTHHAVAQLL--LNFQGQGRTFQLQGVIHLGHLAVGKLHVHHGADTLNNLAL 504
Query: 129 AFS 121
S
Sbjct: 505 YLS 507
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.316 0.133 0.387
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 353,570,746
Number of Sequences: 1657284
Number of extensions: 6496331
Number of successful extensions: 16067
Number of sequences better than 10.0: 31
Number of HSP's better than 10.0 without gapping: 15785
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 16066
length of database: 575,637,011
effective HSP length: 90
effective length of database: 426,481,451
effective search space used: 12367962079
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.6 bits)
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