Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= brS-1249
         (360 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY745233-1|AAU93512.1|  100|Anopheles gambiae SOD3B protein.           23   2.6  
AJ271193-1|CAB66001.1| 1623|Anopheles gambiae laminin gamma 1 pr...    23   3.5  

>AY745233-1|AAU93512.1|  100|Anopheles gambiae SOD3B protein.
          Length = 100

 Score = 23.4 bits (48), Expect = 2.6
 Identities = 10/31 (32%), Positives = 15/31 (48%)
 Frame = -1

Query: 303 FSTVHGNGPNCVLTQMLGYLKYEAGRSILHL 211
           +S   GN  NC+   ++G  + E     LHL
Sbjct: 70  YSKTTGNSGNCIACAIIGVAREEYFAERLHL 100


>AJ271193-1|CAB66001.1| 1623|Anopheles gambiae laminin gamma 1
           precursor protein.
          Length = 1623

 Score = 23.0 bits (47), Expect = 3.5
 Identities = 12/38 (31%), Positives = 18/38 (47%)
 Frame = -3

Query: 328 YGLPTGLSLQYRPWQWSELCSHPNVGLPQVRGGEIDFA 215
           YGLP  LS+     +   LC+     +  +R G I F+
Sbjct: 182 YGLPDSLSVMNGEDESRALCTSEYSDISPLRDGNIAFS 219


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.316    0.133    0.387 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 365,885
Number of Sequences: 2352
Number of extensions: 6692
Number of successful extensions: 5
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5
length of database: 563,979
effective HSP length: 57
effective length of database: 429,915
effective search space used: 26654730
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.6 bits)