Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= brS-1249
(360 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
X71013-1|CAA50332.1| 500|Drosophila melanogaster ATP synthase b... 99 8e-22
AY118367-1|AAM48396.1| 505|Drosophila melanogaster RE10864p pro... 99 8e-22
AE014135-171|AAN06567.1| 127|Drosophila melanogaster CG11154-PB... 99 8e-22
AE014135-170|AAF59391.1| 505|Drosophila melanogaster CG11154-PA... 99 8e-22
AY089257-1|AAL89995.1| 622|Drosophila melanogaster AT04467p pro... 59 2e-09
AE014296-2633|AAF49540.2| 622|Drosophila melanogaster CG5389-PA... 59 2e-09
AY069389-1|AAL39534.1| 225|Drosophila melanogaster LD09790p pro... 29 1.4
AF098069-1|AAC83820.1| 225|Drosophila melanogaster platelet-act... 29 1.4
AE014298-2223|AAN09364.1| 225|Drosophila melanogaster CG8962-PB... 29 1.4
AE014298-2222|AAF48514.1| 225|Drosophila melanogaster CG8962-PA... 29 1.4
AY118951-1|AAM50811.1| 577|Drosophila melanogaster LD33878p pro... 27 7.2
AE013599-439|AAF59238.1| 539|Drosophila melanogaster CG1602-PA ... 27 7.2
AE014134-1918|AAN10758.1| 185|Drosophila melanogaster CG6138-PA... 27 9.5
AE014134-1917|AAF52975.1| 510|Drosophila melanogaster CG6138-PB... 27 9.5
>X71013-1|CAA50332.1| 500|Drosophila melanogaster ATP synthase beta
subunit protein.
Length = 500
Score = 99 bits (238), Expect = 8e-22
Identities = 47/49 (95%), Positives = 48/49 (97%)
Frame = +1
Query: 166 DVQFEDNLPPILNALEVQNRSPRLVLEVAQHLGENTVRTIAMDGTEGLV 312
DVQF+DNLPPILNALEV NRSPRLVLEVAQHLGENTVRTIAMDGTEGLV
Sbjct: 44 DVQFDDNLPPILNALEVDNRSPRLVLEVAQHLGENTVRTIAMDGTEGLV 92
Score = 28.7 bits (61), Expect = 2.4
Identities = 12/15 (80%), Positives = 13/15 (86%)
Frame = +2
Query: 314 RGQPVLDSGSPIRIP 358
RGQ VLD+G PIRIP
Sbjct: 93 RGQKVLDTGYPIRIP 107
>AY118367-1|AAM48396.1| 505|Drosophila melanogaster RE10864p
protein.
Length = 505
Score = 99 bits (238), Expect = 8e-22
Identities = 47/49 (95%), Positives = 48/49 (97%)
Frame = +1
Query: 166 DVQFEDNLPPILNALEVQNRSPRLVLEVAQHLGENTVRTIAMDGTEGLV 312
DVQF+DNLPPILNALEV NRSPRLVLEVAQHLGENTVRTIAMDGTEGLV
Sbjct: 49 DVQFDDNLPPILNALEVDNRSPRLVLEVAQHLGENTVRTIAMDGTEGLV 97
Score = 28.7 bits (61), Expect = 2.4
Identities = 12/15 (80%), Positives = 13/15 (86%)
Frame = +2
Query: 314 RGQPVLDSGSPIRIP 358
RGQ VLD+G PIRIP
Sbjct: 98 RGQKVLDTGYPIRIP 112
>AE014135-171|AAN06567.1| 127|Drosophila melanogaster CG11154-PB,
isoform B protein.
Length = 127
Score = 99 bits (238), Expect = 8e-22
Identities = 47/49 (95%), Positives = 48/49 (97%)
Frame = +1
Query: 166 DVQFEDNLPPILNALEVQNRSPRLVLEVAQHLGENTVRTIAMDGTEGLV 312
DVQF+DNLPPILNALEV NRSPRLVLEVAQHLGENTVRTIAMDGTEGLV
Sbjct: 49 DVQFDDNLPPILNALEVDNRSPRLVLEVAQHLGENTVRTIAMDGTEGLV 97
Score = 28.7 bits (61), Expect = 2.4
Identities = 12/15 (80%), Positives = 13/15 (86%)
Frame = +2
Query: 314 RGQPVLDSGSPIRIP 358
RGQ VLD+G PIRIP
Sbjct: 98 RGQKVLDTGYPIRIP 112
>AE014135-170|AAF59391.1| 505|Drosophila melanogaster CG11154-PA,
isoform A protein.
Length = 505
Score = 99 bits (238), Expect = 8e-22
Identities = 47/49 (95%), Positives = 48/49 (97%)
Frame = +1
Query: 166 DVQFEDNLPPILNALEVQNRSPRLVLEVAQHLGENTVRTIAMDGTEGLV 312
DVQF+DNLPPILNALEV NRSPRLVLEVAQHLGENTVRTIAMDGTEGLV
Sbjct: 49 DVQFDDNLPPILNALEVDNRSPRLVLEVAQHLGENTVRTIAMDGTEGLV 97
Score = 28.7 bits (61), Expect = 2.4
Identities = 12/15 (80%), Positives = 13/15 (86%)
Frame = +2
Query: 314 RGQPVLDSGSPIRIP 358
RGQ VLD+G PIRIP
Sbjct: 98 RGQKVLDTGYPIRIP 112
>AY089257-1|AAL89995.1| 622|Drosophila melanogaster AT04467p
protein.
Length = 622
Score = 58.8 bits (136), Expect = 2e-09
Identities = 29/49 (59%), Positives = 35/49 (71%), Gaps = 1/49 (2%)
Frame = +1
Query: 166 DVQFEDNLPPILNALEVQNRS-PRLVLEVAQHLGENTVRTIAMDGTEGL 309
DV FE+ +P +LNAL+VQ+ LVLEV HLG N VR +AMD TEGL
Sbjct: 115 DVYFEEEVPEVLNALQVQDAPIANLVLEVFHHLGNNIVRCVAMDSTEGL 163
Score = 28.7 bits (61), Expect = 2.4
Identities = 11/14 (78%), Positives = 13/14 (92%)
Frame = +2
Query: 314 RGQPVLDSGSPIRI 355
RGQPVLD+G PIR+
Sbjct: 165 RGQPVLDTGYPIRV 178
>AE014296-2633|AAF49540.2| 622|Drosophila melanogaster CG5389-PA
protein.
Length = 622
Score = 58.8 bits (136), Expect = 2e-09
Identities = 29/49 (59%), Positives = 35/49 (71%), Gaps = 1/49 (2%)
Frame = +1
Query: 166 DVQFEDNLPPILNALEVQNRS-PRLVLEVAQHLGENTVRTIAMDGTEGL 309
DV FE+ +P +LNAL+VQ+ LVLEV HLG N VR +AMD TEGL
Sbjct: 115 DVYFEEEVPEVLNALQVQDAPIANLVLEVFHHLGNNIVRCVAMDSTEGL 163
Score = 28.7 bits (61), Expect = 2.4
Identities = 11/14 (78%), Positives = 13/14 (92%)
Frame = +2
Query: 314 RGQPVLDSGSPIRI 355
RGQPVLD+G PIR+
Sbjct: 165 RGQPVLDTGYPIRV 178
>AY069389-1|AAL39534.1| 225|Drosophila melanogaster LD09790p
protein.
Length = 225
Score = 29.5 bits (63), Expect = 1.4
Identities = 16/47 (34%), Positives = 27/47 (57%)
Frame = +1
Query: 214 VQNRSPRLVLEVAQHLGENTVRTIAMDGTEGLVPWATRTRLWLTNSY 354
+ N +P++V+ H+G N VR A + EG++ T+ R L N+Y
Sbjct: 85 LDNVNPKIVV---LHVGTNNVRNSAEEVAEGVLANVTKIRQKLPNAY 128
>AF098069-1|AAC83820.1| 225|Drosophila melanogaster
platelet-activating factor acetylhydrolasealpha subunit
homolog protein.
Length = 225
Score = 29.5 bits (63), Expect = 1.4
Identities = 16/47 (34%), Positives = 27/47 (57%)
Frame = +1
Query: 214 VQNRSPRLVLEVAQHLGENTVRTIAMDGTEGLVPWATRTRLWLTNSY 354
+ N +P++V+ H+G N VR A + EG++ T+ R L N+Y
Sbjct: 85 LDNVNPKIVV---LHVGTNNVRNSAEEVAEGVLANVTKIRQKLPNAY 128
>AE014298-2223|AAN09364.1| 225|Drosophila melanogaster CG8962-PB,
isoform B protein.
Length = 225
Score = 29.5 bits (63), Expect = 1.4
Identities = 16/47 (34%), Positives = 27/47 (57%)
Frame = +1
Query: 214 VQNRSPRLVLEVAQHLGENTVRTIAMDGTEGLVPWATRTRLWLTNSY 354
+ N +P++V+ H+G N VR A + EG++ T+ R L N+Y
Sbjct: 85 LDNVNPKIVV---LHVGTNNVRNSAEEVAEGVLANVTKIRQKLPNAY 128
>AE014298-2222|AAF48514.1| 225|Drosophila melanogaster CG8962-PA,
isoform A protein.
Length = 225
Score = 29.5 bits (63), Expect = 1.4
Identities = 16/47 (34%), Positives = 27/47 (57%)
Frame = +1
Query: 214 VQNRSPRLVLEVAQHLGENTVRTIAMDGTEGLVPWATRTRLWLTNSY 354
+ N +P++V+ H+G N VR A + EG++ T+ R L N+Y
Sbjct: 85 LDNVNPKIVV---LHVGTNNVRNSAEEVAEGVLANVTKIRQKLPNAY 128
>AY118951-1|AAM50811.1| 577|Drosophila melanogaster LD33878p
protein.
Length = 577
Score = 27.1 bits (57), Expect = 7.2
Identities = 13/36 (36%), Positives = 18/36 (50%)
Frame = -3
Query: 286 QWSELCSHPNVGLPQVRGGEIDFAPQGHLESEAGYL 179
QW E H +VR E DF P G +E+G++
Sbjct: 31 QWQEFVLHIRNVHSKVRSMEDDFEPVGENSTESGHV 66
>AE013599-439|AAF59238.1| 539|Drosophila melanogaster CG1602-PA
protein.
Length = 539
Score = 27.1 bits (57), Expect = 7.2
Identities = 13/36 (36%), Positives = 18/36 (50%)
Frame = -3
Query: 286 QWSELCSHPNVGLPQVRGGEIDFAPQGHLESEAGYL 179
QW E H +VR E DF P G +E+G++
Sbjct: 31 QWQEFVLHIRNVHSKVRSMEDDFEPVGENSTESGHV 66
>AE014134-1918|AAN10758.1| 185|Drosophila melanogaster CG6138-PA,
isoform A protein.
Length = 185
Score = 26.6 bits (56), Expect = 9.5
Identities = 13/32 (40%), Positives = 21/32 (65%)
Frame = +2
Query: 2 VELEAAF*PLNQLLRNPFQNVEKSLQSMPLTR 97
+E+ +F L +LLR VE+SL+SMP ++
Sbjct: 29 LEMRESFKTLQKLLRRSSLPVEESLRSMPRSK 60
>AE014134-1917|AAF52975.1| 510|Drosophila melanogaster CG6138-PB,
isoform B protein.
Length = 510
Score = 26.6 bits (56), Expect = 9.5
Identities = 13/32 (40%), Positives = 21/32 (65%)
Frame = +2
Query: 2 VELEAAF*PLNQLLRNPFQNVEKSLQSMPLTR 97
+E+ +F L +LLR VE+SL+SMP ++
Sbjct: 29 LEMRESFKTLQKLLRRSSLPVEESLRSMPRSK 60
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.316 0.133 0.387
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,094,082
Number of Sequences: 53049
Number of extensions: 311869
Number of successful extensions: 684
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 672
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 682
length of database: 24,988,368
effective HSP length: 76
effective length of database: 20,956,644
effective search space used: 901135692
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.6 bits)
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