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Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= brS-1232
         (444 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY921579-1|AAX14899.1|  996|Apis mellifera ephrin receptor protein.    87   6e-20
AF469010-1|AAL93136.1|  678|Apis mellifera cGMP-dependent protei...    80   1e-17
AB183889-1|BAD86829.1|  316|Apis mellifera Mos protein.                78   5e-17
AB013287-1|BAA87893.1|  190|Apis mellifera calmodulin kinase II ...    71   8e-15
DQ013068-1|AAY81956.1|  931|Apis mellifera dusty protein kinase ...    64   5e-13
DQ013067-1|AAY81955.1|  969|Apis mellifera dusty protein kinase ...    64   5e-13
AB013288-1|BAA87894.1|  149|Apis mellifera protein kinase C prot...    52   3e-09
DQ667188-1|ABG75740.1|  383|Apis mellifera histamine-gated chlor...    23   1.1  
AF514804-1|AAM51823.1|  537|Apis mellifera neuronal nicotinic ac...    23   1.1  
EF625898-1|ABR45905.1|  686|Apis mellifera hexamerin protein.          23   2.0  
EF589162-1|ABQ84439.1|  686|Apis mellifera hexamerin 70c protein.      23   2.0  
DQ026032-1|AAY87891.1|  566|Apis mellifera nicotinic acetylcholi...    22   2.6  
DQ026039-1|AAY87898.1|  427|Apis mellifera nicotinic acetylcholi...    22   3.5  
AY540846-1|AAS48080.1|  541|Apis mellifera neuronal nicotinic ac...    22   3.5  
DQ667195-1|ABG75747.1|  469|Apis mellifera cys-loop ligand-gated...    21   8.0  
DQ667194-1|ABG75746.1|  391|Apis mellifera cys-loop ligand-gated...    21   8.0  

>AY921579-1|AAX14899.1|  996|Apis mellifera ephrin receptor protein.
          Length = 996

 Score = 87.4 bits (207), Expect = 6e-20
 Identities = 53/129 (41%), Positives = 70/129 (54%), Gaps = 6/129 (4%)
 Frame = +1

Query: 16   IIMEFCQYGPLYDFLHSG-ASFTPRQIIRWAKDIAQGMVYLHNRKIIHRDLKSPNVLVAD 192
            II EF + G L  FL +    F   Q++   + IA GM YL     +HRDL + NVLV  
Sbjct: 711  IITEFMENGSLDTFLRANDGKFQVLQLVGMLRGIASGMQYLAEMNYVHRDLAARNVLVNA 770

Query: 193  NLVAKVSDFGTSREWDN--ESAVMSFTG--TVAWMAPEVIRHEPCSERVDVWSFGVVLWE 360
             LV K++DFG SRE ++  E A  +  G   V W APE I     +   DVWS G+V WE
Sbjct: 771  ALVCKIADFGLSREIESATEGAYTTRGGKIPVRWTAPEAIAFRKFTSASDVWSMGIVCWE 830

Query: 361  LLTQ-EIPY 384
            +++  E PY
Sbjct: 831  VMSYGERPY 839


>AF469010-1|AAL93136.1|  678|Apis mellifera cGMP-dependent protein
           kinase foraging protein.
          Length = 678

 Score = 79.8 bits (188), Expect = 1e-17
 Identities = 42/123 (34%), Positives = 65/123 (52%)
 Frame = +1

Query: 16  IIMEFCQYGPLYDFLHSGASFTPRQIIRWAKDIAQGMVYLHNRKIIHRDLKSPNVLVADN 195
           ++ME C  G L+  L     F       +   + +   YLH+R II+RDLK  N+L+   
Sbjct: 443 MLMEACLGGELWTVLRDKGHFDDGTTRFYTACVVEAFDYLHSRNIIYRDLKPENLLLDSQ 502

Query: 196 LVAKVSDFGTSREWDNESAVMSFTGTVAWMAPEVIRHEPCSERVDVWSFGVVLWELLTQE 375
              K+ DFG ++  D+     +F GT  ++APEVI ++      D WS GV+++ELLT  
Sbjct: 503 GYVKLVDFGFAKRLDHGRKTWTFCGTPEYVAPEVILNKGHDISADYWSLGVLMFELLTGT 562

Query: 376 IPY 384
            P+
Sbjct: 563 PPF 565


>AB183889-1|BAD86829.1|  316|Apis mellifera Mos protein.
          Length = 316

 Score = 77.8 bits (183), Expect = 5e-17
 Identities = 34/103 (33%), Positives = 61/103 (59%)
 Frame = +1

Query: 106 KDIAQGMVYLHNRKIIHRDLKSPNVLVADNLVAKVSDFGTSREWDNESAVMSFTGTVAWM 285
           K I   + + HN  I+H D+K  N+L++ N   K++DFG+S      + +  F GT  + 
Sbjct: 162 KSITCALQFCHNAGIVHADVKPKNILMSKNGQPKLTDFGSSVLIGAPNEIDKFYGTPGYT 221

Query: 286 APEVIRHEPCSERVDVWSFGVVLWELLTQEIPYKTLETHAILW 414
           APEVI+    +   D++S G+V W++L +++P+  L +H I++
Sbjct: 222 APEVIKQNRPTPAADIYSLGIVAWQMLFRKLPFAGLHSHTIIY 264


>AB013287-1|BAA87893.1|  190|Apis mellifera calmodulin kinase II
           protein.
          Length = 190

 Score = 70.5 bits (165), Expect = 8e-15
 Identities = 35/105 (33%), Positives = 61/105 (58%), Gaps = 4/105 (3%)
 Frame = +1

Query: 106 KDIAQGMVYLHNRKIIHRDLKSPNVLVADNL---VAKVSDFGTSREWDNES-AVMSFTGT 273
           + I + + + H+  ++HRDLK  N+L+A        K++DFG + E   E+ A   F GT
Sbjct: 16  QQILESVHHCHHNGVVHRDLKPENLLLASKAKGAAVKLADFGLAIEVQGEAQAWFGFAGT 75

Query: 274 VAWMAPEVIRHEPCSERVDVWSFGVVLWELLTQEIPYKTLETHAI 408
             +++PEV++ EP  + VD+W+ GV+L+ LL    P+   + H +
Sbjct: 76  PGYLSPEVLKKEPYGKPVDIWACGVILYILLVGYPPFWDEDQHRL 120


>DQ013068-1|AAY81956.1|  931|Apis mellifera dusty protein kinase
            isoform B protein.
          Length = 931

 Score = 64.5 bits (150), Expect = 5e-13
 Identities = 44/127 (34%), Positives = 69/127 (54%), Gaps = 4/127 (3%)
 Frame = +1

Query: 46   LYDFLHSGASFTPRQIIRWAKDIAQGMVYLHNRKIIHRDLKSPNVLVADNLVAKVSDFGT 225
            LY  + +G S+  R  I+ A D+ +G+ YLH++ ++HRD+K  NVL+     AK++DFG 
Sbjct: 686  LYCGIRAGLSWLER--IQIALDVLEGIRYLHSQGLVHRDVKLKNVLLDIENRAKLTDFGF 743

Query: 226  SREWDNESAVMSFTGTVAWMAPEVIRHEPCSERVDVWSFGVVLWELLTQEI--PYKTLET 399
                     + S  GT   MAPE++     S  VDV++FG++ W L    +  PY   + 
Sbjct: 744  C--ITEVMMLGSIVGTPVHMAPELLSGHYDSS-VDVYAFGILFWYLCAGHVRLPYTFEQF 800

Query: 400  H--AILW 414
            H   +LW
Sbjct: 801  HNKELLW 807


>DQ013067-1|AAY81955.1|  969|Apis mellifera dusty protein kinase
            isoform A protein.
          Length = 969

 Score = 64.5 bits (150), Expect = 5e-13
 Identities = 44/127 (34%), Positives = 69/127 (54%), Gaps = 4/127 (3%)
 Frame = +1

Query: 46   LYDFLHSGASFTPRQIIRWAKDIAQGMVYLHNRKIIHRDLKSPNVLVADNLVAKVSDFGT 225
            LY  + +G S+  R  I+ A D+ +G+ YLH++ ++HRD+K  NVL+     AK++DFG 
Sbjct: 724  LYCGIRAGLSWLER--IQIALDVLEGIRYLHSQGLVHRDVKLKNVLLDIENRAKLTDFGF 781

Query: 226  SREWDNESAVMSFTGTVAWMAPEVIRHEPCSERVDVWSFGVVLWELLTQEI--PYKTLET 399
                     + S  GT   MAPE++     S  VDV++FG++ W L    +  PY   + 
Sbjct: 782  C--ITEVMMLGSIVGTPVHMAPELLSGHYDSS-VDVYAFGILFWYLCAGHVRLPYTFEQF 838

Query: 400  H--AILW 414
            H   +LW
Sbjct: 839  HNKELLW 845


>AB013288-1|BAA87894.1|  149|Apis mellifera protein kinase C
           protein.
          Length = 149

 Score = 52.0 bits (119), Expect = 3e-09
 Identities = 28/86 (32%), Positives = 45/86 (52%), Gaps = 1/86 (1%)
 Frame = +1

Query: 19  IMEFCQYGPLYDFLHSGASFTPRQIIRWAKDIAQGMVYLHNRKIIHRDLKSPNVLVADNL 198
           +ME+   G L   +     F     + +A +IA G+ +LH R I++RDLK  NVL+  + 
Sbjct: 63  VMEYVNGGDLMYQIQQCGKFKEPVAVFYASEIAIGLFFLHGRGIVYRDLKLDNVLLDQDG 122

Query: 199 VAKVSDFGTSREW-DNESAVMSFTGT 273
             K++DFG  +E    +    +F GT
Sbjct: 123 HIKIADFGMCKEGISGDKTTKTFCGT 148


>DQ667188-1|ABG75740.1|  383|Apis mellifera histamine-gated chloride
           channel protein.
          Length = 383

 Score = 23.4 bits (48), Expect = 1.1
 Identities = 13/37 (35%), Positives = 16/37 (43%)
 Frame = -1

Query: 351 HNTERPDIHTLRARLMADHFGRHPGHCAREAHDGTLV 241
           HN  RPD     A+ +  H    P H     HD TL+
Sbjct: 85  HNIWRPDCFFKNAKKVTFHEMSIPNHYLWLYHDKTLL 121


>AF514804-1|AAM51823.1|  537|Apis mellifera neuronal nicotinic
           acetylcholine receptoralpha-3 protein.
          Length = 537

 Score = 23.4 bits (48), Expect = 1.1
 Identities = 9/31 (29%), Positives = 16/31 (51%)
 Frame = +1

Query: 250 AVMSFTGTVAWMAPEVIRHEPCSERVDVWSF 342
           A + +TG V+W  P + +   C   V+ + F
Sbjct: 138 ATLKYTGDVSWKPPAIYK-SSCEINVEYFPF 167


>EF625898-1|ABR45905.1|  686|Apis mellifera hexamerin protein.
          Length = 686

 Score = 22.6 bits (46), Expect = 2.0
 Identities = 11/28 (39%), Positives = 16/28 (57%)
 Frame = +2

Query: 5   KTIALSWSSVNTGHSTTSFTAVHLLHPD 88
           KT A +   +N+G  TT+F+   L  PD
Sbjct: 126 KTAAWARLRMNSGMFTTAFSIAVLYRPD 153


>EF589162-1|ABQ84439.1|  686|Apis mellifera hexamerin 70c protein.
          Length = 686

 Score = 22.6 bits (46), Expect = 2.0
 Identities = 11/28 (39%), Positives = 16/28 (57%)
 Frame = +2

Query: 5   KTIALSWSSVNTGHSTTSFTAVHLLHPD 88
           KT A +   +N+G  TT+F+   L  PD
Sbjct: 126 KTAAWARLRMNSGMFTTAFSIAVLYRPD 153


>DQ026032-1|AAY87891.1|  566|Apis mellifera nicotinic acetylcholine
           receptor alpha3subunit protein.
          Length = 566

 Score = 22.2 bits (45), Expect = 2.6
 Identities = 9/31 (29%), Positives = 16/31 (51%)
 Frame = +1

Query: 250 AVMSFTGTVAWMAPEVIRHEPCSERVDVWSF 342
           A +++TG V W  P + +   C   V+ + F
Sbjct: 129 ATLNYTGRVEWKPPAIYK-SSCEIDVEYFPF 158


>DQ026039-1|AAY87898.1|  427|Apis mellifera nicotinic acetylcholine
           receptor beta2subunit protein.
          Length = 427

 Score = 21.8 bits (44), Expect = 3.5
 Identities = 8/20 (40%), Positives = 11/20 (55%)
 Frame = +3

Query: 21  HGVLSIRATLRLPSQRCIFY 80
           H V S+   L +PS  CI +
Sbjct: 123 HSVTSVGIDLEMPSVECIVF 142


>AY540846-1|AAS48080.1|  541|Apis mellifera neuronal nicotinic
           acetylcholine receptorApisa2 subunit protein.
          Length = 541

 Score = 21.8 bits (44), Expect = 3.5
 Identities = 6/18 (33%), Positives = 11/18 (61%)
 Frame = +1

Query: 250 AVMSFTGTVAWMAPEVIR 303
           A++ +TG V W  P + +
Sbjct: 125 AILHYTGKVLWTPPAIFK 142


>DQ667195-1|ABG75747.1|  469|Apis mellifera cys-loop ligand-gated
           ion channel subunit protein.
          Length = 469

 Score = 20.6 bits (41), Expect = 8.0
 Identities = 6/15 (40%), Positives = 11/15 (73%)
 Frame = +1

Query: 58  LHSGASFTPRQIIRW 102
           LH+  + TP++I +W
Sbjct: 429 LHNFTTMTPQEIAQW 443


>DQ667194-1|ABG75746.1|  391|Apis mellifera cys-loop ligand-gated
           ion channel subunit protein.
          Length = 391

 Score = 20.6 bits (41), Expect = 8.0
 Identities = 8/22 (36%), Positives = 15/22 (68%)
 Frame = +1

Query: 196 LVAKVSDFGTSREWDNESAVMS 261
           +V KV D  +  E+D ++++MS
Sbjct: 281 VVVKVLDLRSQLEYDLQTSIMS 302


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 142,621
Number of Sequences: 438
Number of extensions: 3187
Number of successful extensions: 22
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 18
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 18
length of database: 146,343
effective HSP length: 53
effective length of database: 123,129
effective search space used: 11574126
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.2 bits)

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