Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= brS-1218
         (613 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

X72339-1|CAA51066.1|  133|Tribolium castaneum abdominal protein.       23   1.5  
AF017415-2|AAB70263.1|  284|Tribolium castaneum abdominal-A prot...    23   1.5  
AF017415-1|AAB70262.1|  343|Tribolium castaneum abdominal-AII pr...    23   1.5  
AM292376-1|CAL23188.2|  402|Tribolium castaneum gustatory recept...    22   3.5  
EU008544-1|ABS31131.1|  493|Tribolium castaneum cytochrome P450 ...    21   6.2  
DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 pro...    21   6.2  
AY800247-1|AAV66724.1|  790|Tribolium castaneum pangolin protein.      21   6.2  
AY800246-1|AAV66723.1|  682|Tribolium castaneum pangolin protein.      21   6.2  
AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory recept...    21   6.2  
AM292322-1|CAL23134.1|  373|Tribolium castaneum gustatory recept...    21   6.2  

>X72339-1|CAA51066.1|  133|Tribolium castaneum abdominal protein.
          Length = 133

 Score = 23.4 bits (48), Expect = 1.5
 Identities = 8/33 (24%), Positives = 16/33 (48%)
 Frame = -3

Query: 470 RHHQSARHHRGPRQERKRELESYLVHRIDMHRH 372
           R  +    H+  +QE+++++E      I  H H
Sbjct: 77  REREEQERHKQQQQEKQQKIEQQTHSSIHQHHH 109


>AF017415-2|AAB70263.1|  284|Tribolium castaneum abdominal-A
           protein.
          Length = 284

 Score = 23.4 bits (48), Expect = 1.5
 Identities = 8/33 (24%), Positives = 16/33 (48%)
 Frame = -3

Query: 470 RHHQSARHHRGPRQERKRELESYLVHRIDMHRH 372
           R  +    H+  +QE+++++E      I  H H
Sbjct: 228 REREEQERHKQQQQEKQQKIEQQTHSSIHQHHH 260


>AF017415-1|AAB70262.1|  343|Tribolium castaneum abdominal-AII
           protein.
          Length = 343

 Score = 23.4 bits (48), Expect = 1.5
 Identities = 8/33 (24%), Positives = 16/33 (48%)
 Frame = -3

Query: 470 RHHQSARHHRGPRQERKRELESYLVHRIDMHRH 372
           R  +    H+  +QE+++++E      I  H H
Sbjct: 287 REREEQERHKQQQQEKQQKIEQQTHSSIHQHHH 319


>AM292376-1|CAL23188.2|  402|Tribolium castaneum gustatory receptor
           candidate 55 protein.
          Length = 402

 Score = 22.2 bits (45), Expect = 3.5
 Identities = 16/47 (34%), Positives = 23/47 (48%)
 Frame = +1

Query: 94  FSVLCAFRYLIALVKHQIAFVTYYLLIFCGPKKMSASSATFVIDASS 234
           FSVL  F     L+   +  VT YL+IF    + S S   +V+  +S
Sbjct: 354 FSVLGFFVVDYTLLYSIVGAVTTYLVIFIQFDQSSNSRNNYVLTNNS 400


>EU008544-1|ABS31131.1|  493|Tribolium castaneum cytochrome P450
           protein.
          Length = 493

 Score = 21.4 bits (43), Expect = 6.2
 Identities = 7/25 (28%), Positives = 16/25 (64%)
 Frame = +3

Query: 228 VVLLYWTRTRHAACWHAPSTFGNKP 302
           ++LLY+  ++H + W + +   +KP
Sbjct: 10  LLLLYYIYSKHYSYWQSKNVPTDKP 34


>DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 protein.
          Length = 2700

 Score = 21.4 bits (43), Expect = 6.2
 Identities = 9/29 (31%), Positives = 13/29 (44%)
 Frame = -2

Query: 213  RCRAGTHFLWAAKNQQIVRNKSDLMLYEC 127
            RC  G H L    N ++    SD+ +  C
Sbjct: 2671 RCGCGKHPLLKTLNNELRGTPSDISVTNC 2699


>AY800247-1|AAV66724.1|  790|Tribolium castaneum pangolin protein.
          Length = 790

 Score = 21.4 bits (43), Expect = 6.2
 Identities = 12/35 (34%), Positives = 14/35 (40%)
 Frame = +3

Query: 261 AACWHAPSTFGNKPPDLLSQK*IRKRPISLSRSPN 365
           AA WH PS +   P            PIS S  P+
Sbjct: 185 AASWHTPSMYPLSPGAGFRSPYPSALPISTSSLPS 219


>AY800246-1|AAV66723.1|  682|Tribolium castaneum pangolin protein.
          Length = 682

 Score = 21.4 bits (43), Expect = 6.2
 Identities = 12/35 (34%), Positives = 14/35 (40%)
 Frame = +3

Query: 261 AACWHAPSTFGNKPPDLLSQK*IRKRPISLSRSPN 365
           AA WH PS +   P            PIS S  P+
Sbjct: 77  AASWHTPSMYPLSPGAGFRSPYPSALPISTSSLPS 111


>AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory receptor
           candidate 46 protein.
          Length = 1451

 Score = 21.4 bits (43), Expect = 6.2
 Identities = 8/14 (57%), Positives = 9/14 (64%)
 Frame = -3

Query: 515 MCLLHRHLWALTTR 474
           +C LH HL  L TR
Sbjct: 578 ICTLHHHLSKLVTR 591


>AM292322-1|CAL23134.1|  373|Tribolium castaneum gustatory receptor
           candidate 1 protein.
          Length = 373

 Score = 21.4 bits (43), Expect = 6.2
 Identities = 8/14 (57%), Positives = 9/14 (64%)
 Frame = -3

Query: 515 MCLLHRHLWALTTR 474
           +C LH HL  L TR
Sbjct: 222 ICTLHHHLSKLVTR 235


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 146,316
Number of Sequences: 336
Number of extensions: 3075
Number of successful extensions: 14
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 14
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 14
length of database: 122,585
effective HSP length: 54
effective length of database: 104,441
effective search space used: 15561709
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)