Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= brS-1218
(613 letters)
Database: mosquito
2352 sequences; 563,979 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY299455-1|AAQ73620.1| 493|Anopheles gambiae FMRF amide recepto... 32 0.013
AB090813-1|BAC57901.1| 724|Anopheles gambiae gag-like protein p... 27 0.36
AF020851-1|AAC31864.1| 214|Anopheles gambiae unknown protein. 26 1.1
AF020850-1|AAC31863.1| 214|Anopheles gambiae unknown protein. 26 1.1
AF020849-1|AAC31862.1| 214|Anopheles gambiae unknown protein. 26 1.1
AB090822-2|BAC57920.1| 1173|Anopheles gambiae reverse transcript... 26 1.1
DQ004399-1|AAY21238.1| 847|Anopheles gambiae lysozyme c-6 protein. 25 2.5
M93690-1|AAA29364.1| 613|Anopheles gambiae ORF1 protein. 23 5.9
AB090812-2|BAC57900.1| 1173|Anopheles gambiae reverse transcript... 23 5.9
CR954257-12|CAJ14163.1| 1645|Anopheles gambiae putative cytoskel... 23 7.8
>AY299455-1|AAQ73620.1| 493|Anopheles gambiae FMRF amide receptor
protein.
Length = 493
Score = 32.3 bits (70), Expect = 0.013
Identities = 22/77 (28%), Positives = 38/77 (49%)
Frame = +1
Query: 79 VSPFLFSVLCAFRYLIALVKHQIAFVTYYLLIFCGPKKMSASSATFVIDASSFSTGPVRD 258
VS L ++ + + I ++ + F +LL+FC P+ + + D SSFS G
Sbjct: 347 VSNLLVTINSSVNFFIYVIFGE-KFKRIFLLLFCKPRGRQSPDDGLIHDDSSFSNGDA-- 403
Query: 259 TQRVGTRPRRLGTSLPT 309
+ R R +R+GT+ T
Sbjct: 404 SNRNSGRFQRVGTTRST 420
>AB090813-1|BAC57901.1| 724|Anopheles gambiae gag-like protein
protein.
Length = 724
Score = 27.5 bits (58), Expect = 0.36
Identities = 16/44 (36%), Positives = 27/44 (61%)
Frame = -3
Query: 545 QTREQQQQKVMCLLHRHLWALTTRVRHHQSARHHRGPRQERKRE 414
Q ++Q QQ+ + + LW TT VR S RH R P+Q+++++
Sbjct: 217 QRQQQPQQQQLQQPQQQLW--TTVVRGRPSQRH-RQPQQQQQQQ 257
Score = 23.8 bits (49), Expect = 4.4
Identities = 13/49 (26%), Positives = 24/49 (48%)
Frame = -3
Query: 545 QTREQQQQKVMCLLHRHLWALTTRVRHHQSARHHRGPRQERKRELESYL 399
Q ++QQQQ L HR L R Q + + +Q+++++ + L
Sbjct: 371 QQQQQQQQPRQSLPHRKQTQLQLSPRLQQQQQQQQQSQQQQQQQPQQLL 419
>AF020851-1|AAC31864.1| 214|Anopheles gambiae unknown protein.
Length = 214
Score = 25.8 bits (54), Expect = 1.1
Identities = 11/33 (33%), Positives = 18/33 (54%)
Frame = -3
Query: 482 TTRVRHHQSARHHRGPRQERKRELESYLVHRID 384
+T+ RHH S HHR R+ + + Y + +D
Sbjct: 24 STKHRHH-SRHHHRRRRERYRSQRFGYEIQNVD 55
>AF020850-1|AAC31863.1| 214|Anopheles gambiae unknown protein.
Length = 214
Score = 25.8 bits (54), Expect = 1.1
Identities = 11/33 (33%), Positives = 18/33 (54%)
Frame = -3
Query: 482 TTRVRHHQSARHHRGPRQERKRELESYLVHRID 384
+T+ RHH S HHR R+ + + Y + +D
Sbjct: 24 STKHRHH-SRHHHRRRRERYRSQRFGYEIQNVD 55
>AF020849-1|AAC31862.1| 214|Anopheles gambiae unknown protein.
Length = 214
Score = 25.8 bits (54), Expect = 1.1
Identities = 11/33 (33%), Positives = 18/33 (54%)
Frame = -3
Query: 482 TTRVRHHQSARHHRGPRQERKRELESYLVHRID 384
+T+ RHH S HHR R+ + + Y + +D
Sbjct: 24 STKHRHH-SRHHHRRRRERYRSQRFGYEIQNVD 55
>AB090822-2|BAC57920.1| 1173|Anopheles gambiae reverse transcriptase
protein.
Length = 1173
Score = 25.8 bits (54), Expect = 1.1
Identities = 14/30 (46%), Positives = 15/30 (50%), Gaps = 2/30 (6%)
Frame = -3
Query: 506 LHRHLWALTTRVR--HHQSARHHRGPRQER 423
LHRH L + R H QS H R PR R
Sbjct: 217 LHRHQHQLQPQQRRFHRQSPAHRRKPRWRR 246
>DQ004399-1|AAY21238.1| 847|Anopheles gambiae lysozyme c-6 protein.
Length = 847
Score = 24.6 bits (51), Expect = 2.5
Identities = 11/30 (36%), Positives = 14/30 (46%)
Frame = -2
Query: 297 CSQTSRARANTLRVSYGSSREGRRVDDKRC 208
CSQ R RV+ + R+ DD RC
Sbjct: 240 CSQDDRRPGKACRVTCAAMRDDDIADDVRC 269
>M93690-1|AAA29364.1| 613|Anopheles gambiae ORF1 protein.
Length = 613
Score = 23.4 bits (48), Expect = 5.9
Identities = 12/47 (25%), Positives = 26/47 (55%)
Frame = -3
Query: 545 QTREQQQQKVMCLLHRHLWALTTRVRHHQSARHHRGPRQERKRELES 405
Q ++QQ+Q+ + LW TT VR Q+ + + Q ++++ ++
Sbjct: 292 QQQQQQRQQQQQQEQQELW--TTVVRRRQNTQQQQQSNQPQQQQQQT 336
>AB090812-2|BAC57900.1| 1173|Anopheles gambiae reverse transcriptase
protein.
Length = 1173
Score = 23.4 bits (48), Expect = 5.9
Identities = 11/37 (29%), Positives = 17/37 (45%)
Frame = -3
Query: 437 PRQERKRELESYLVHRIDMHRHGNVWRTRQGYRPLPN 327
PR ER+RE+ V R+ + Y+P P+
Sbjct: 1085 PRTERRREVNRLAVARLRERQRAARAEMHGAYQPAPS 1121
>CR954257-12|CAJ14163.1| 1645|Anopheles gambiae putative cytoskeletal
structural protein protein.
Length = 1645
Score = 23.0 bits (47), Expect = 7.8
Identities = 10/19 (52%), Positives = 13/19 (68%)
Frame = +1
Query: 292 GTSLPTYFHRSKFGRGRYP 348
GT+ P FH+S GRG +P
Sbjct: 1209 GTA-PNSFHKSSPGRGSWP 1226
Database: mosquito
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 563,979
Number of sequences in database: 2352
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 651,343
Number of Sequences: 2352
Number of extensions: 13645
Number of successful extensions: 38
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 35
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 38
length of database: 563,979
effective HSP length: 61
effective length of database: 420,507
effective search space used: 59711994
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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