Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= brS-1210
         (353 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY095933-1|AAM34435.1|  505|Anopheles gambiae cytochrome P450 pr...    24   1.5  
AY341187-1|AAR13751.1|  189|Anopheles gambiae GNBP A1 protein.         24   1.9  
AY341186-1|AAR13750.1|  189|Anopheles gambiae GNBP A1 protein.         24   1.9  
AY341185-1|AAR13749.1|  189|Anopheles gambiae GNBP A1 protein.         24   1.9  
AJ439060-4|CAD27755.1|  151|Anopheles gambiae putative sRNP prot...    24   1.9  
AY534996-1|AAT07394.1|  471|Anopheles gambiae XK-related b protein.    23   3.4  
AY341184-1|AAR13748.1|  187|Anopheles gambiae GNBP A1 protein.         23   4.4  
AY341183-1|AAR13747.1|  189|Anopheles gambiae GNBP A1 protein.         23   4.4  
AY578811-1|AAT07316.1|  565|Anopheles gambiae thickveins protein.      22   5.9  
AY344825-1|AAR02436.1|  153|Anopheles gambiae peritrophin A prot...    22   5.9  
AJ439398-8|CAD28131.1| 1283|Anopheles gambiae putative different...    22   7.8  

>AY095933-1|AAM34435.1|  505|Anopheles gambiae cytochrome P450
           protein.
          Length = 505

 Score = 24.2 bits (50), Expect = 1.5
 Identities = 9/18 (50%), Positives = 13/18 (72%)
 Frame = -1

Query: 290 FHRTVLHLHHRDEQLSGH 237
           FH   L+++ RD+ LSGH
Sbjct: 103 FHDRGLYVNERDDPLSGH 120


>AY341187-1|AAR13751.1|  189|Anopheles gambiae GNBP A1 protein.
          Length = 189

 Score = 23.8 bits (49), Expect = 1.9
 Identities = 11/37 (29%), Positives = 18/37 (48%)
 Frame = +3

Query: 201 RWCQLLNTPVLSVT*KLLVPMVKVQYSSMKGLRLHLP 311
           RW   L    +  T    +P V+ +Y +M+G R  +P
Sbjct: 2   RWTWGLLLFFVGQTVAYTIPAVRFEYPTMRGFRASIP 38


>AY341186-1|AAR13750.1|  189|Anopheles gambiae GNBP A1 protein.
          Length = 189

 Score = 23.8 bits (49), Expect = 1.9
 Identities = 11/37 (29%), Positives = 18/37 (48%)
 Frame = +3

Query: 201 RWCQLLNTPVLSVT*KLLVPMVKVQYSSMKGLRLHLP 311
           RW   L    +  T    +P V+ +Y +M+G R  +P
Sbjct: 2   RWTWGLLLFFVGQTVAYTIPAVRFEYPTMRGFRASIP 38


>AY341185-1|AAR13749.1|  189|Anopheles gambiae GNBP A1 protein.
          Length = 189

 Score = 23.8 bits (49), Expect = 1.9
 Identities = 11/37 (29%), Positives = 18/37 (48%)
 Frame = +3

Query: 201 RWCQLLNTPVLSVT*KLLVPMVKVQYSSMKGLRLHLP 311
           RW   L    +  T    +P V+ +Y +M+G R  +P
Sbjct: 2   RWTWGLLLFFVGQTVAYTIPAVRFEYPTMRGFRASIP 38


>AJ439060-4|CAD27755.1|  151|Anopheles gambiae putative sRNP
           protein.
          Length = 151

 Score = 23.8 bits (49), Expect = 1.9
 Identities = 9/16 (56%), Positives = 10/16 (62%)
 Frame = -1

Query: 104 PPPRLGCRHPVRSVPT 57
           PPP +G R P   VPT
Sbjct: 110 PPPMMGMRPPPMMVPT 125


>AY534996-1|AAT07394.1|  471|Anopheles gambiae XK-related b protein.
          Length = 471

 Score = 23.0 bits (47), Expect = 3.4
 Identities = 9/22 (40%), Positives = 12/22 (54%)
 Frame = -1

Query: 140 SK*PYSCLADGKPPPRLGCRHP 75
           +K P SC ++  PPP   C  P
Sbjct: 447 AKLPISCSSNSIPPPSNHCSSP 468


>AY341184-1|AAR13748.1|  187|Anopheles gambiae GNBP A1 protein.
          Length = 187

 Score = 22.6 bits (46), Expect = 4.4
 Identities = 10/37 (27%), Positives = 18/37 (48%)
 Frame = +3

Query: 201 RWCQLLNTPVLSVT*KLLVPMVKVQYSSMKGLRLHLP 311
           RW   L    +  T    +P ++ +Y +M+G R  +P
Sbjct: 2   RWTWGLLLFFVGQTVAYTIPALRFEYPTMRGFRASIP 38


>AY341183-1|AAR13747.1|  189|Anopheles gambiae GNBP A1 protein.
          Length = 189

 Score = 22.6 bits (46), Expect = 4.4
 Identities = 10/37 (27%), Positives = 18/37 (48%)
 Frame = +3

Query: 201 RWCQLLNTPVLSVT*KLLVPMVKVQYSSMKGLRLHLP 311
           RW   L    +  T    +P ++ +Y +M+G R  +P
Sbjct: 2   RWTWGLLLFFVGQTVAYTIPALRFEYPTMRGFRASIP 38


>AY578811-1|AAT07316.1|  565|Anopheles gambiae thickveins protein.
          Length = 565

 Score = 22.2 bits (45), Expect = 5.9
 Identities = 8/15 (53%), Positives = 9/15 (60%)
 Frame = +1

Query: 76  GCRHPSRGGGLPSAK 120
           GC  P +GGGL   K
Sbjct: 119 GCMSPEQGGGLLQCK 133


>AY344825-1|AAR02436.1|  153|Anopheles gambiae peritrophin A
           protein.
          Length = 153

 Score = 22.2 bits (45), Expect = 5.9
 Identities = 7/8 (87%), Positives = 8/8 (100%)
 Frame = +2

Query: 305 PPEDDPKQ 328
           PP+DDPKQ
Sbjct: 22  PPQDDPKQ 29


>AJ439398-8|CAD28131.1| 1283|Anopheles gambiae putative
           differentiation regulator protein.
          Length = 1283

 Score = 21.8 bits (44), Expect = 7.8
 Identities = 10/24 (41%), Positives = 17/24 (70%), Gaps = 1/24 (4%)
 Frame = +1

Query: 61  GTLRTGCR-HPSRGGGLPSAKQEY 129
           G +R+G     SRGGG+ +AK+++
Sbjct: 287 GRIRSGDGGRDSRGGGVDAAKKQH 310


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 421,893
Number of Sequences: 2352
Number of extensions: 8451
Number of successful extensions: 25
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 25
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 25
length of database: 563,979
effective HSP length: 57
effective length of database: 429,915
effective search space used: 25794900
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)