Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= brS-1210
(353 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF213012-1|AAG43568.1| 492|Apis mellifera acetylcholinesterase ... 23 0.81
AB181702-1|BAE06051.1| 628|Apis mellifera acetylcholinesterase ... 23 0.81
S76956-1|AAB33931.1| 168|Apis mellifera olfactory receptor prot... 21 3.3
AB253415-1|BAE86926.1| 588|Apis mellifera alpha-glucosidase pro... 21 5.7
AB167961-1|BAD51404.1| 554|Apis mellifera E74 protein. 21 5.7
AY569719-1|AAS86672.1| 401|Apis mellifera feminizer protein. 20 7.5
AY569718-1|AAS86671.1| 401|Apis mellifera feminizer protein. 20 7.5
AY569715-1|AAS86668.1| 401|Apis mellifera feminizer protein. 20 7.5
AY569714-1|AAS86667.1| 401|Apis mellifera feminizer protein. 20 7.5
AY569713-1|AAS86666.1| 401|Apis mellifera feminizer protein. 20 7.5
AY569711-1|AAS86664.1| 401|Apis mellifera feminizer protein. 20 7.5
AY569702-1|AAS86655.1| 400|Apis mellifera feminizer protein. 20 7.5
AY350616-1|AAQ57658.1| 401|Apis mellifera complementary sex det... 20 7.5
DQ667195-1|ABG75747.1| 469|Apis mellifera cys-loop ligand-gated... 20 9.9
AY769960-1|AAV34676.1| 603|Apis mellifera soluble guanylyl cycl... 20 9.9
AY569709-1|AAS86662.1| 408|Apis mellifera complementary sex det... 20 9.9
AY569703-1|AAS86656.1| 396|Apis mellifera complementary sex det... 20 9.9
AY569701-1|AAS86654.1| 407|Apis mellifera complementary sex det... 20 9.9
AY569700-1|AAS86653.1| 407|Apis mellifera complementary sex det... 20 9.9
AY569699-1|AAS86652.1| 396|Apis mellifera complementary sex det... 20 9.9
AY526236-1|AAS20469.1| 85|Apis mellifera epoxide hydrolase pro... 20 9.9
AJ547798-1|CAD67999.1| 587|Apis mellifera octopamine receptor p... 20 9.9
AB270697-1|BAF75928.1| 735|Apis mellifera FoxP protein protein. 20 9.9
AB181489-1|BAD22772.1| 603|Apis mellifera soluble guanylyl cycl... 20 9.9
>AF213012-1|AAG43568.1| 492|Apis mellifera acetylcholinesterase
protein.
Length = 492
Score = 23.4 bits (48), Expect = 0.81
Identities = 8/19 (42%), Positives = 13/19 (68%)
Frame = +1
Query: 67 LRTGCRHPSRGGGLPSAKQ 123
L + C PSRG +PS+++
Sbjct: 12 LLSSCTRPSRGNAVPSSQR 30
>AB181702-1|BAE06051.1| 628|Apis mellifera acetylcholinesterase
protein.
Length = 628
Score = 23.4 bits (48), Expect = 0.81
Identities = 8/19 (42%), Positives = 13/19 (68%)
Frame = +1
Query: 67 LRTGCRHPSRGGGLPSAKQ 123
L + C PSRG +PS+++
Sbjct: 12 LLSSCTRPSRGNAVPSSQR 30
>S76956-1|AAB33931.1| 168|Apis mellifera olfactory receptor
protein.
Length = 168
Score = 21.4 bits (43), Expect = 3.3
Identities = 12/32 (37%), Positives = 17/32 (53%), Gaps = 2/32 (6%)
Frame = -2
Query: 304 CNLSPFIELYCTFT--IGTSSFQVTLSTGVFS 215
C++SP + L C T + F V + GVFS
Sbjct: 58 CDMSPLLSLVCADTRLNKLAVFIVAGAVGVFS 89
>AB253415-1|BAE86926.1| 588|Apis mellifera alpha-glucosidase
protein.
Length = 588
Score = 20.6 bits (41), Expect = 5.7
Identities = 6/15 (40%), Positives = 10/15 (66%)
Frame = -2
Query: 145 GLQSSHIPVWLMVNH 101
G +++P W+M NH
Sbjct: 346 GTPQNNVPNWVMGNH 360
>AB167961-1|BAD51404.1| 554|Apis mellifera E74 protein.
Length = 554
Score = 20.6 bits (41), Expect = 5.7
Identities = 7/24 (29%), Positives = 12/24 (50%)
Frame = +1
Query: 85 HPSRGGGLPSAKQEYGYFEGHFHP 156
+PS G LP + + + +HP
Sbjct: 305 YPSTAGFLPPSYHPHQHHPSQYHP 328
>AY569719-1|AAS86672.1| 401|Apis mellifera feminizer protein.
Length = 401
Score = 20.2 bits (40), Expect = 7.5
Identities = 8/21 (38%), Positives = 12/21 (57%)
Frame = +2
Query: 239 DLKAARPYGEGAVQFYERAEV 301
D+ R GEG+ +ER E+
Sbjct: 156 DVMLKRRTGEGSKPIFEREEI 176
>AY569718-1|AAS86671.1| 401|Apis mellifera feminizer protein.
Length = 401
Score = 20.2 bits (40), Expect = 7.5
Identities = 8/21 (38%), Positives = 12/21 (57%)
Frame = +2
Query: 239 DLKAARPYGEGAVQFYERAEV 301
D+ R GEG+ +ER E+
Sbjct: 156 DVMLKRRTGEGSKPIFEREEI 176
>AY569715-1|AAS86668.1| 401|Apis mellifera feminizer protein.
Length = 401
Score = 20.2 bits (40), Expect = 7.5
Identities = 8/21 (38%), Positives = 12/21 (57%)
Frame = +2
Query: 239 DLKAARPYGEGAVQFYERAEV 301
D+ R GEG+ +ER E+
Sbjct: 156 DVMLKRRTGEGSKPIFEREEI 176
>AY569714-1|AAS86667.1| 401|Apis mellifera feminizer protein.
Length = 401
Score = 20.2 bits (40), Expect = 7.5
Identities = 8/21 (38%), Positives = 12/21 (57%)
Frame = +2
Query: 239 DLKAARPYGEGAVQFYERAEV 301
D+ R GEG+ +ER E+
Sbjct: 156 DVMLKRRTGEGSKPIFEREEI 176
>AY569713-1|AAS86666.1| 401|Apis mellifera feminizer protein.
Length = 401
Score = 20.2 bits (40), Expect = 7.5
Identities = 8/21 (38%), Positives = 12/21 (57%)
Frame = +2
Query: 239 DLKAARPYGEGAVQFYERAEV 301
D+ R GEG+ +ER E+
Sbjct: 156 DVMLKRRTGEGSKPIFEREEI 176
>AY569711-1|AAS86664.1| 401|Apis mellifera feminizer protein.
Length = 401
Score = 20.2 bits (40), Expect = 7.5
Identities = 8/21 (38%), Positives = 12/21 (57%)
Frame = +2
Query: 239 DLKAARPYGEGAVQFYERAEV 301
D+ R GEG+ +ER E+
Sbjct: 156 DVMLKRRTGEGSKPIFEREEI 176
>AY569702-1|AAS86655.1| 400|Apis mellifera feminizer protein.
Length = 400
Score = 20.2 bits (40), Expect = 7.5
Identities = 8/21 (38%), Positives = 12/21 (57%)
Frame = +2
Query: 239 DLKAARPYGEGAVQFYERAEV 301
D+ R GEG+ +ER E+
Sbjct: 156 DVMLKRRTGEGSKPIFEREEI 176
>AY350616-1|AAQ57658.1| 401|Apis mellifera complementary sex
determiner protein.
Length = 401
Score = 20.2 bits (40), Expect = 7.5
Identities = 8/21 (38%), Positives = 12/21 (57%)
Frame = +2
Query: 239 DLKAARPYGEGAVQFYERAEV 301
D+ R GEG+ +ER E+
Sbjct: 156 DVMLKRRTGEGSKPIFEREEI 176
>DQ667195-1|ABG75747.1| 469|Apis mellifera cys-loop ligand-gated
ion channel subunit protein.
Length = 469
Score = 19.8 bits (39), Expect = 9.9
Identities = 6/13 (46%), Positives = 11/13 (84%)
Frame = +1
Query: 112 SAKQEYGYFEGHF 150
+++Q YG+F G+F
Sbjct: 206 TSQQYYGHFAGNF 218
>AY769960-1|AAV34676.1| 603|Apis mellifera soluble guanylyl cyclase
beta 1 subunit protein.
Length = 603
Score = 19.8 bits (39), Expect = 9.9
Identities = 7/14 (50%), Positives = 12/14 (85%)
Frame = +3
Query: 147 FPSVLNL*KISRKS 188
+PSV+NL ++R+S
Sbjct: 314 YPSVMNLDDLTRRS 327
>AY569709-1|AAS86662.1| 408|Apis mellifera complementary sex
determiner protein.
Length = 408
Score = 19.8 bits (39), Expect = 9.9
Identities = 10/32 (31%), Positives = 15/32 (46%)
Frame = +2
Query: 206 VSAAKYTRAERDLKAARPYGEGAVQFYERAEV 301
V + T D+ R GEG+ +ER E+
Sbjct: 148 VEVKRDTINPEDVILIRRTGEGSKPIFEREEI 179
>AY569703-1|AAS86656.1| 396|Apis mellifera complementary sex
determiner protein.
Length = 396
Score = 19.8 bits (39), Expect = 9.9
Identities = 8/21 (38%), Positives = 12/21 (57%)
Frame = +2
Query: 239 DLKAARPYGEGAVQFYERAEV 301
D+ R GEG+ +ER E+
Sbjct: 148 DVIVIRRTGEGSKPLFEREEI 168
>AY569701-1|AAS86654.1| 407|Apis mellifera complementary sex
determiner protein.
Length = 407
Score = 19.8 bits (39), Expect = 9.9
Identities = 8/21 (38%), Positives = 12/21 (57%)
Frame = +2
Query: 239 DLKAARPYGEGAVQFYERAEV 301
D+ R GEG+ +ER E+
Sbjct: 159 DVIVIRRTGEGSKPLFEREEI 179
>AY569700-1|AAS86653.1| 407|Apis mellifera complementary sex
determiner protein.
Length = 407
Score = 19.8 bits (39), Expect = 9.9
Identities = 8/21 (38%), Positives = 12/21 (57%)
Frame = +2
Query: 239 DLKAARPYGEGAVQFYERAEV 301
D+ R GEG+ +ER E+
Sbjct: 159 DVIVIRRTGEGSKPLFEREEI 179
>AY569699-1|AAS86652.1| 396|Apis mellifera complementary sex
determiner protein.
Length = 396
Score = 19.8 bits (39), Expect = 9.9
Identities = 8/21 (38%), Positives = 12/21 (57%)
Frame = +2
Query: 239 DLKAARPYGEGAVQFYERAEV 301
D+ R GEG+ +ER E+
Sbjct: 148 DVIVIRRTGEGSKPLFEREEI 168
>AY526236-1|AAS20469.1| 85|Apis mellifera epoxide hydrolase
protein.
Length = 85
Score = 19.8 bits (39), Expect = 9.9
Identities = 5/16 (31%), Positives = 10/16 (62%)
Frame = -3
Query: 60 NILQILWVFIGKIYQS 13
N+ + W+F+G + S
Sbjct: 33 NLSNLFWLFVGTYFPS 48
>AJ547798-1|CAD67999.1| 587|Apis mellifera octopamine receptor
protein.
Length = 587
Score = 19.8 bits (39), Expect = 9.9
Identities = 10/25 (40%), Positives = 12/25 (48%)
Frame = +3
Query: 39 PIKFAKCWDASDRVSAPKSWRWFTI 113
P+K + S R SA RWF I
Sbjct: 10 PVKSFRESRCSVRCSAASGLRWFEI 34
>AB270697-1|BAF75928.1| 735|Apis mellifera FoxP protein protein.
Length = 735
Score = 19.8 bits (39), Expect = 9.9
Identities = 6/11 (54%), Positives = 9/11 (81%)
Frame = +2
Query: 278 QFYERAEVTPP 310
+FY+ A+V PP
Sbjct: 496 EFYKNADVRPP 506
>AB181489-1|BAD22772.1| 603|Apis mellifera soluble guanylyl cyclase
beta 1 subunit protein.
Length = 603
Score = 19.8 bits (39), Expect = 9.9
Identities = 7/14 (50%), Positives = 12/14 (85%)
Frame = +3
Query: 147 FPSVLNL*KISRKS 188
+PSV+NL ++R+S
Sbjct: 314 YPSVMNLDDLTRRS 327
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 108,678
Number of Sequences: 438
Number of extensions: 2542
Number of successful extensions: 24
Number of sequences better than 10.0: 24
Number of HSP's better than 10.0 without gapping: 24
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 24
length of database: 146,343
effective HSP length: 51
effective length of database: 124,005
effective search space used: 8184330
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 39 (20.8 bits)
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