Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= brS-1206
         (667 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory recept...    24   1.3  
DQ855498-1|ABH88185.1|  127|Tribolium castaneum chemosensory pro...    23   1.7  
AJ973445-1|CAJ01492.1|  127|Tribolium castaneum hypothetical pro...    23   1.7  
AM292378-1|CAL23190.2|  387|Tribolium castaneum gustatory recept...    22   3.9  
DQ855505-1|ABH88192.1|  119|Tribolium castaneum chemosensory pro...    22   5.2  
AY800247-1|AAV66724.1|  790|Tribolium castaneum pangolin protein.      21   9.1  
AY800246-1|AAV66723.1|  682|Tribolium castaneum pangolin protein.      21   9.1  

>AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory receptor
           candidate 19 protein.
          Length = 355

 Score = 23.8 bits (49), Expect = 1.3
 Identities = 10/27 (37%), Positives = 14/27 (51%)
 Frame = +2

Query: 272 LLFYCRFIIL*TDYVLSKVIMFSVLVI 352
           LLFYC FII    ++L     +   +I
Sbjct: 83  LLFYCPFIIFTVHFLLCTYYFYYAFII 109


>DQ855498-1|ABH88185.1|  127|Tribolium castaneum chemosensory
           protein 12 protein.
          Length = 127

 Score = 23.4 bits (48), Expect = 1.7
 Identities = 10/24 (41%), Positives = 15/24 (62%)
 Frame = -2

Query: 666 YTNMN*NTILNRNVLMKNKETCIL 595
           Y N++ N IL  + L+KN   C+L
Sbjct: 26  YDNIDLNQILKSDRLLKNYVNCLL 49


>AJ973445-1|CAJ01492.1|  127|Tribolium castaneum hypothetical
           protein protein.
          Length = 127

 Score = 23.4 bits (48), Expect = 1.7
 Identities = 10/24 (41%), Positives = 15/24 (62%)
 Frame = -2

Query: 666 YTNMN*NTILNRNVLMKNKETCIL 595
           Y N++ N IL  + L+KN   C+L
Sbjct: 26  YDNIDLNQILKSDRLLKNYVNCLL 49


>AM292378-1|CAL23190.2|  387|Tribolium castaneum gustatory receptor
           candidate 57 protein.
          Length = 387

 Score = 22.2 bits (45), Expect = 3.9
 Identities = 9/16 (56%), Positives = 11/16 (68%)
 Frame = +1

Query: 589 IC*DTCFLIFH*HIPI 636
           +C  T FLIFH  +PI
Sbjct: 156 VCNTTIFLIFHSVLPI 171


>DQ855505-1|ABH88192.1|  119|Tribolium castaneum chemosensory
           protein 19 protein.
          Length = 119

 Score = 21.8 bits (44), Expect = 5.2
 Identities = 10/24 (41%), Positives = 14/24 (58%)
 Frame = -2

Query: 666 YTNMN*NTILNRNVLMKNKETCIL 595
           Y N+N + IL    L+KN   CI+
Sbjct: 23  YDNINVDEILASERLLKNYFNCIM 46


>AY800247-1|AAV66724.1|  790|Tribolium castaneum pangolin protein.
          Length = 790

 Score = 21.0 bits (42), Expect = 9.1
 Identities = 7/18 (38%), Positives = 12/18 (66%)
 Frame = +3

Query: 582 LNNMLGYMFPYFSLAHSD 635
           +N +LG+  PY +L  +D
Sbjct: 388 MNTVLGHQNPYLALPKTD 405


>AY800246-1|AAV66723.1|  682|Tribolium castaneum pangolin protein.
          Length = 682

 Score = 21.0 bits (42), Expect = 9.1
 Identities = 7/18 (38%), Positives = 12/18 (66%)
 Frame = +3

Query: 582 LNNMLGYMFPYFSLAHSD 635
           +N +LG+  PY +L  +D
Sbjct: 280 MNTVLGHQNPYLALPKTD 297


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 145,409
Number of Sequences: 336
Number of extensions: 3098
Number of successful extensions: 8
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 17281430
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)