BLASTX 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= brS-1196 (421 letters) Database: rice 37,544 sequences; 14,793,348 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value 01_05_0108 + 18183250-18183336,18183451-18183962,18184074-181842... 47 7e-06 02_04_0414 - 22685981-22686178,22686374-22686465,22686580-226866... 44 4e-05 02_05_0540 + 29852109-29852195,29852304-29852477,29852585-298528... 42 3e-04 12_02_0126 + 13958247-13958298,13958422-13958972,13959076-13960047 28 3.5 05_04_0272 + 19624898-19625071,19625909-19626370,19626471-196269... 28 3.5 05_04_0139 + 18355597-18355696,18356665-18356778,18357118-183572... 28 3.5 12_02_0442 - 19118536-19119222 27 4.6 12_01_0825 - 7611594-7611728,7612061-7612276,7612505-7612589,761... 27 4.6 04_04_1574 - 34536744-34537136,34541247-34541405,34541497-345424... 27 4.6 09_06_0183 - 21406474-21406636,21407412-21407956 27 6.1 09_02_0587 - 10948888-10949124,10949281-10949393,10949830-109502... 27 6.1 01_06_0744 + 31628884-31629035,31629157-31629284,31629695-31629702 27 6.1 10_08_1005 - 22179407-22180122,22180210-22180653,22180737-221808... 27 8.1 08_02_0551 - 18535219-18536134,18536140-18536345 27 8.1 05_05_0352 + 24328117-24328303,24328451-24328559,24330634-243306... 27 8.1 04_04_1268 - 32262994-32263017,32263411-32263488,32263653-322638... 27 8.1 >01_05_0108 + 18183250-18183336,18183451-18183962,18184074-18184245, 18184984-18185022,18185117-18185185,18185281-18185397, 18185842-18186056,18187085-18187240,18187328-18187527, 18187927-18188084,18188321-18188417,18188738-18188829, 18189018-18189191 Length = 695 Score = 46.8 bits (106), Expect = 7e-06 Identities = 42/151 (27%), Positives = 72/151 (47%), Gaps = 12/151 (7%) Frame = +3 Query: 3 FTAWCNSHLRKAGTGIENIEDDFRNGLKLMLLLEVISGETL--PKPDRG--KMRFHKIAN 170 F W NS T I N+ +D RNG L+ +++ I+ ++ +R K+ F K+ N Sbjct: 433 FRLWINS--LGISTYINNVFEDLRNGWVLLEVIDKIAPGSVNWKMANRPPIKLPFRKVEN 490 Query: 171 VNKALDFIASKGVKLVSIGAEEIVDGNLKMTLGMIWTIILRFAIQDI--------SVEEM 326 N+ L LV+I +IV GN K+ L +W ++R+ I + + +E+ Sbjct: 491 CNQVLKIGKELKFSLVNIAGNDIVQGNKKLILAFLWQ-LMRYNILQLLKNLRFHSNGKEI 549 Query: 327 TAKEGLLLWCQRKTAPYKNVNVQNLHLSFKD 419 T + +L+W +K K+ + SFKD Sbjct: 550 TDND-ILIWANKKV---KDSGKHSRMESFKD 576 >02_04_0414 - 22685981-22686178,22686374-22686465,22686580-22686676, 22686801-22686916,22687314-22687513,22687588-22687740, 22687960-22688171,22688403-22688519,22688613-22688687, 22688815-22688853,22689518-22689689,22689809-22690056, 22690151-22690324,22690418-22690504 Length = 659 Score = 44.4 bits (100), Expect = 4e-05 Identities = 36/137 (26%), Positives = 59/137 (43%), Gaps = 10/137 (7%) Frame = +3 Query: 3 FTAWCNSHLRKAGTGIENIEDDFRNGLKLMLLLEVISGETLPKPDRGK----MRFHKIAN 170 F W NS T + N+ +D R G L+ +L+ IS + K M F K+ N Sbjct: 403 FRLWINS--LGIATYVNNLFEDVRTGWVLLEVLDKISPGIVNWKQASKPPIIMPFRKVEN 460 Query: 171 VNKALDFIASKGVKLVSIGAEEIVDGNLKMTLGMIW----TIILRFA--IQDISVEEMTA 332 N+ ++ +V+I +IV GN K+ L +W T IL+ ++ S ++ Sbjct: 461 GNQVIEIGKELKFSVVNISGNDIVQGNKKLILAFLWQLMRTSILQLLKNLRTHSKDKEIT 520 Query: 333 KEGLLLWCQRKTAPYKN 383 +L+W K N Sbjct: 521 DADILIWANNKDKSIAN 537 >02_05_0540 + 29852109-29852195,29852304-29852477,29852585-29852841, 29852954-29853125,29853513-29853551,29853647-29853715, 29853795-29853911,29854190-29854401,29854578-29854736, 29854810-29855009,29855100-29855266,29855346-29855442, 29855560-29855651,29855861-29856139 Length = 706 Score = 41.5 bits (93), Expect = 3e-04 Identities = 28/103 (27%), Positives = 52/103 (50%), Gaps = 5/103 (4%) Frame = +3 Query: 3 FTAWCNSHLRKAGTGIENIEDDFRNGLKLMLLLEVISGETL-----PKPDRGKMRFHKIA 167 F W NS + + N+ +D R+G L+ +L+ +S ++ KP K+ F K+ Sbjct: 406 FRMWINS--LGVDSYVNNVFEDVRHGWVLLEVLDKVSPGSVNWKLASKPPI-KLPFRKLE 462 Query: 168 NVNKALDFIASKGVKLVSIGAEEIVDGNLKMTLGMIWTIILRF 296 N N+ + LV++ +IV GN K+ + ++W ++RF Sbjct: 463 NCNQVVKIGKELKFSLVNLAGNDIVQGNKKLIVALLWQ-LMRF 504 Score = 29.5 bits (63), Expect = 1.1 Identities = 22/91 (24%), Positives = 46/91 (50%), Gaps = 4/91 (4%) Frame = +3 Query: 63 DDFRNGLKLMLLLEVISGETLPKPDRGKMR----FHKIANVNKALDFIASKGVKLVSIGA 230 D R+G+ L L+ + T+ + K R + + N L+ + G +V+IG Sbjct: 164 DLVRDGVLLCKLINLAVPGTIDERAINKKRVLNPWERNENHTLCLNSAKAIGCTVVNIGT 223 Query: 231 EEIVDGNLKMTLGMIWTIILRFAIQDISVEE 323 +++V+G + LG+I II + D+++++ Sbjct: 224 QDLVEGRPHLILGLISQIIKIQLLADLNLKK 254 Score = 29.1 bits (62), Expect = 1.5 Identities = 14/42 (33%), Positives = 22/42 (52%), Gaps = 2/42 (4%) Frame = +3 Query: 12 WCNSHLRKAG--TGIENIEDDFRNGLKLMLLLEVISGETLPK 131 W N HL+KAG + N D ++G LL+ ++ E P+ Sbjct: 283 WMNHHLKKAGYKKTVSNFSTDVKDGEAYAYLLKALAPEHSPE 324 >12_02_0126 + 13958247-13958298,13958422-13958972,13959076-13960047 Length = 524 Score = 27.9 bits (59), Expect = 3.5 Identities = 12/21 (57%), Positives = 14/21 (66%) Frame = +3 Query: 141 GKMRFHKIANVNKALDFIASK 203 G MR HKI +V KAL F+ K Sbjct: 71 GSMRGHKIESVKKALQFVIMK 91 >05_04_0272 + 19624898-19625071,19625909-19626370,19626471-19626905, 19626992-19627237,19627318-19628085,19628245-19628417, 19629337-19629440,19629525-19630127,19630210-19630214 Length = 989 Score = 27.9 bits (59), Expect = 3.5 Identities = 23/72 (31%), Positives = 34/72 (47%), Gaps = 5/72 (6%) Frame = +3 Query: 21 SHLRKAGTGIENIEDDFR-----NGLKLMLLLEVISGETLPKPDRGKMRFHKIANVNKAL 185 +H KAG I D R NGL+ LLLE I+ + P ++ K+AN AL Sbjct: 773 AHGSKAGFPISGFYSDMRKMQNMNGLEGQLLLEPITNDLQPMEKCNSVQSPKVANFT-AL 831 Query: 186 DFIASKGVKLVS 221 + ++ + VS Sbjct: 832 HNVDNESMNHVS 843 >05_04_0139 + 18355597-18355696,18356665-18356778,18357118-18357263, 18357365-18357910,18358397-18358600 Length = 369 Score = 27.9 bits (59), Expect = 3.5 Identities = 13/32 (40%), Positives = 20/32 (62%) Frame = -3 Query: 197 GDEVECLVDVSDFVESHFATVGLGQSLAGDDL 102 G V+ + +++ E H A VG GQ+L GDD+ Sbjct: 212 GGGVDGELAIAEAAELHDAVVGRGQALHGDDV 243 >12_02_0442 - 19118536-19119222 Length = 228 Score = 27.5 bits (58), Expect = 4.6 Identities = 13/35 (37%), Positives = 17/35 (48%) Frame = -1 Query: 142 PRSGLGRVSPEMTSSSNMSFRPLRKSSSMFSMPVP 38 PR GLGR P ++ S RP+R+ P P Sbjct: 22 PRQGLGRAKPRSEATRWQSRRPVRRLDRSPDPPPP 56 >12_01_0825 - 7611594-7611728,7612061-7612276,7612505-7612589, 7613170-7613372,7613935-7615723,7616322-7616450, 7616825-7616928,7618725-7618779,7618860-7618975 Length = 943 Score = 27.5 bits (58), Expect = 4.6 Identities = 17/60 (28%), Positives = 25/60 (41%) Frame = +3 Query: 30 RKAGTGIENIEDDFRNGLKLMLLLEVISGETLPKPDRGKMRFHKIANVNKALDFIASKGV 209 R+ T I DD L+ +L +G+ L PD GK + N N + +GV Sbjct: 714 RRTATNITTTYDDLPGNLQPAGILIEHNGDDLVSPDYGKNTMKQKQNTNMESLSVCKEGV 773 >04_04_1574 - 34536744-34537136,34541247-34541405,34541497-34542411, 34543642-34543731,34544324-34544390,34544483-34544676, 34544770-34545510,34545596-34545661,34545783-34545908, 34545978-34546073,34546153-34546521,34546602-34546724, 34546802-34546906,34547394-34547531,34547665-34547760, 34548018-34548275 Length = 1311 Score = 27.5 bits (58), Expect = 4.6 Identities = 14/26 (53%), Positives = 15/26 (57%), Gaps = 1/26 (3%) Frame = -3 Query: 302 DGEAENNGPNHTKSHLK-VTIDDFFG 228 DGE GP H +HLK V I FFG Sbjct: 1196 DGELRIVGPPHQHAHLKRVRISGFFG 1221 >09_06_0183 - 21406474-21406636,21407412-21407956 Length = 235 Score = 27.1 bits (57), Expect = 6.1 Identities = 18/49 (36%), Positives = 25/49 (51%) Frame = +2 Query: 44 RHREHRGRLPQWPEAHVAAGGHLRRDSAQARPWQNAIPQNR*RQQGTRL 190 R RE +GR Q + A+G R + Q P + PQ+ R +GTRL Sbjct: 185 RRREKKGRRMQEEKRVEASGSFSRSLATQVGPSPDRWPQS--RNRGTRL 231 >09_02_0587 - 10948888-10949124,10949281-10949393,10949830-10950293, 10951223-10951766,10951902-10951971 Length = 475 Score = 27.1 bits (57), Expect = 6.1 Identities = 17/49 (34%), Positives = 29/49 (59%) Frame = -1 Query: 184 SALLTLAILWNRILPRSGLGRVSPEMTSSSNMSFRPLRKSSSMFSMPVP 38 S + TL+ ++R R G+++P+ T N+S K++SMFS+P P Sbjct: 199 SDISTLSYPYDRY-DRHWWGQIAPDPTCK-NLSTASTIKNNSMFSVPSP 245 >01_06_0744 + 31628884-31629035,31629157-31629284,31629695-31629702 Length = 95 Score = 27.1 bits (57), Expect = 6.1 Identities = 14/33 (42%), Positives = 21/33 (63%) Frame = -1 Query: 268 PRVILRLPSTISSAPIDTSFTPFEAMKSSALLT 170 PR+ILR P +SS ++T P + +SAL+T Sbjct: 46 PRLILRSPVEMSSVCLET-LMPMHSATASALMT 77 >10_08_1005 - 22179407-22180122,22180210-22180653,22180737-22180861, 22180939-22181169,22181250-22181805,22181896-22182312, 22182405-22183216,22183653-22183738,22184464-22184534, 22184553-22185573,22186018-22186062,22186252-22186326, 22186797-22186871 Length = 1557 Score = 26.6 bits (56), Expect = 8.1 Identities = 17/55 (30%), Positives = 24/55 (43%) Frame = -3 Query: 401 QVLDIDILVRRCLTLTPEQQTFLCGHFFN*DVLDGEAENNGPNHTKSHLKVTIDD 237 +V D + L C E QT G VLDG+ +N+ + LKV + D Sbjct: 467 KVPDGEWLCEECCLKEDENQTRSNGGTSRNKVLDGKNQNSESTNNSKTLKVVVTD 521 >08_02_0551 - 18535219-18536134,18536140-18536345 Length = 373 Score = 26.6 bits (56), Expect = 8.1 Identities = 14/52 (26%), Positives = 25/52 (48%) Frame = +3 Query: 12 WCNSHLRKAGTGIENIEDDFRNGLKLMLLLEVISGETLPKPDRGKMRFHKIA 167 W NS+ G + E ++R+ + + + E S E +P P RG + + A Sbjct: 121 WFNSNFGLFRNGFRSPEANWRDTMFVEMFPEAPSPEEIPPPCRGVLEVYAAA 172 >05_05_0352 + 24328117-24328303,24328451-24328559,24330634-24330692, 24331139-24331220,24331361-24331481,24331751-24332278, 24332724-24332831,24332934-24333131,24334043-24334234, 24336116-24336199,24336385-24336525,24336683-24336748, 24336880-24337047,24337134-24337463,24337568-24337666 Length = 823 Score = 26.6 bits (56), Expect = 8.1 Identities = 12/45 (26%), Positives = 24/45 (53%) Frame = +3 Query: 63 DDFRNGLKLMLLLEVISGETLPKPDRGKMRFHKIANVNKALDFIA 197 D+F N L L+L ++G+++PK ++ + +V F+A Sbjct: 357 DEFDNKFNLYLVLLPLNGQSMPKLEKPYLSCQPTFSVRHLCQFVA 401 >04_04_1268 - 32262994-32263017,32263411-32263488,32263653-32263800, 32263890-32264127,32264210-32264420,32264499-32264680, 32264765-32264866,32265009-32266317,32266906-32266988, 32267436-32267559 Length = 832 Score = 26.6 bits (56), Expect = 8.1 Identities = 12/28 (42%), Positives = 15/28 (53%) Frame = -2 Query: 381 SCTALSYVDTRATDLPLRSFLQLRCLGW 298 SCTA +Y + T P + Q RCL W Sbjct: 454 SCTAYAYTNLTITGSPGTTASQSRCLLW 481 Database: rice Posted date: Oct 4, 2007 10:57 AM Number of letters in database: 14,793,348 Number of sequences in database: 37,544 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 11,352,499 Number of Sequences: 37544 Number of extensions: 231904 Number of successful extensions: 730 Number of sequences better than 10.0: 16 Number of HSP's better than 10.0 without gapping: 714 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 730 length of database: 14,793,348 effective HSP length: 75 effective length of database: 11,977,548 effective search space used: 766563072 frameshift window, decay const: 40, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 41 (21.7 bits)
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