BLASTX 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= brS-1196 (421 letters) Database: nematostella 59,808 sequences; 16,821,457 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value SB_57099| Best HMM Match : No HMM Matches (HMM E-Value=.) 119 1e-27 SB_29854| Best HMM Match : No HMM Matches (HMM E-Value=.) 100 1e-21 SB_59115| Best HMM Match : Spectrin (HMM E-Value=0) 89 1e-18 SB_2820| Best HMM Match : No HMM Matches (HMM E-Value=.) 79 1e-15 SB_38289| Best HMM Match : No HMM Matches (HMM E-Value=.) 59 1e-09 SB_40303| Best HMM Match : CH (HMM E-Value=5.1e-10) 58 3e-09 SB_30962| Best HMM Match : No HMM Matches (HMM E-Value=.) 57 5e-09 SB_51904| Best HMM Match : CH (HMM E-Value=0.0058) 50 1e-06 SB_2412| Best HMM Match : No HMM Matches (HMM E-Value=.) 48 2e-06 SB_640| Best HMM Match : No HMM Matches (HMM E-Value=.) 46 1e-05 SB_28852| Best HMM Match : No HMM Matches (HMM E-Value=.) 45 3e-05 SB_47648| Best HMM Match : No HMM Matches (HMM E-Value=.) 43 9e-05 SB_59804| Best HMM Match : No HMM Matches (HMM E-Value=.) 41 5e-04 SB_595| Best HMM Match : CH (HMM E-Value=0) 38 0.004 SB_39164| Best HMM Match : RNB (HMM E-Value=0) 36 0.018 SB_40161| Best HMM Match : CH (HMM E-Value=4.3e-30) 34 0.055 SB_15403| Best HMM Match : CH (HMM E-Value=0) 34 0.055 SB_47035| Best HMM Match : No HMM Matches (HMM E-Value=.) 33 0.073 SB_33144| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 1.2 SB_25577| Best HMM Match : Mab-21 (HMM E-Value=1e-05) 29 2.1 SB_12109| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 3.6 SB_25948| Best HMM Match : Globin (HMM E-Value=1.5e-18) 27 4.8 SB_48827| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 6.3 SB_39070| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 6.3 SB_33733| Best HMM Match : CYTH (HMM E-Value=2.1e-05) 27 8.3 SB_21165| Best HMM Match : LRR_1 (HMM E-Value=6.5e-13) 27 8.3 >SB_57099| Best HMM Match : No HMM Matches (HMM E-Value=.) Length = 2509 Score = 119 bits (286), Expect = 1e-27 Identities = 60/129 (46%), Positives = 88/129 (68%), Gaps = 7/129 (5%) Frame = +3 Query: 3 FTAWCNSHLRKAGTGIENIEDDFRNGLKLMLLLEVISGETLPKPDRGKMRFHKIANVNKA 182 FT W N+ L K G I ++ ++ R+G L+LLLEV+ LP+ +RG +RFH + NV A Sbjct: 43 FTKWVNNRLLKVGVRILDLYEELRDGENLLLLLEVLCNVKLPR-ERGLLRFHMLQNVQTA 101 Query: 183 LDFIASKGVKLVSIGAEEIVDGNLKMTLGMIWTIILRFAIQDISVE-------EMTAKEG 341 L+F+ SK +KLV+I +++IVDGN K+TLG+IWTIIL F I D+ VE +++AK+ Sbjct: 102 LEFLESKKIKLVNIRSDDIVDGNPKLTLGLIWTIILYFQINDLDVEIAGEKVQDLSAKDA 161 Query: 342 LLLWCQRKT 368 LL W ++ T Sbjct: 162 LLHWSKKVT 170 >SB_29854| Best HMM Match : No HMM Matches (HMM E-Value=.) Length = 3235 Score = 99.5 bits (237), Expect = 1e-21 Identities = 52/129 (40%), Positives = 81/129 (62%), Gaps = 8/129 (6%) Frame = +3 Query: 3 FTAWCNSHLRKAGTGIENIEDDFRNGLKLMLLLEVISGETLPKPDRGKM-RFHKIANVNK 179 FT WCN HL+ + ++E D +GLKL+ LL+V+S + LP+ ++ + + KI NV+ Sbjct: 378 FTRWCNEHLKCVKQFVYSLETDLCDGLKLIALLQVLSQKRLPRFNKKPVFKSQKIENVSI 437 Query: 180 ALDFIASKGVKLVSIGAEEIVDGNLKMTLGMIWTIILRFAI-------QDISVEEMTAKE 338 +L FI + ++LV+I A +IV GNLK+ LG+IWT+IL++ I D +MT K+ Sbjct: 438 SLKFIEDENIRLVNIDASDIVKGNLKLILGLIWTLILKYQISMPYLDDDDDENHKMTPKQ 497 Query: 339 GLLLWCQRK 365 LL W + K Sbjct: 498 ALLAWVKSK 506 >SB_59115| Best HMM Match : Spectrin (HMM E-Value=0) Length = 1457 Score = 89.0 bits (211), Expect = 1e-18 Identities = 41/102 (40%), Positives = 66/102 (64%), Gaps = 2/102 (1%) Frame = +3 Query: 3 FTAWCNSHLRKAGTGIE--NIEDDFRNGLKLMLLLEVISGETLPKPDRGKMRFHKIANVN 176 FT W N L +AG + ++ +D ++G L+ LLEV++G+ + K +RG MR H + NVN Sbjct: 31 FTKWINIQLSRAGNNVRVGDLFNDLKDGTILIALLEVLTGKKI-KRERGNMRLHHLNNVN 89 Query: 177 KALDFIASKGVKLVSIGAEEIVDGNLKMTLGMIWTIILRFAI 302 A+ + ++L++I +IVDGN KMTLG+IW++I F + Sbjct: 90 NAMMILEENDIRLINISNNDIVDGNHKMTLGLIWSVIAHFQV 131 >SB_2820| Best HMM Match : No HMM Matches (HMM E-Value=.) Length = 1140 Score = 79.0 bits (186), Expect = 1e-15 Identities = 44/132 (33%), Positives = 76/132 (57%), Gaps = 2/132 (1%) Frame = +3 Query: 3 FTAWCNSHLRKAGTGIENIEDDFRNGLKLMLLLEVISGETLPKPDRGKMRF--HKIANVN 176 FT WCN +R++G I ++ F +G+ ++ L+E ++ E K + +F K+ N Sbjct: 46 FTNWCNEQIRESGIVITDLAIAFNDGVTIVYLVESVA-EKKCKNCKMNPKFVQDKLENTT 104 Query: 177 KALDFIASKGVKLVSIGAEEIVDGNLKMTLGMIWTIILRFAIQDISVEEMTAKEGLLLWC 356 +AL + + G++LV+I ++IV+GNLK+ +G+IW +IL + I S + K+ LLLW Sbjct: 105 QALKLLENDGIQLVNIDNQDIVNGNLKLIMGLIWRLILHYQIS--SSASASGKQLLLLWL 162 Query: 357 QRKTAPYKNVNV 392 + K NV Sbjct: 163 KNALPELKIGNV 174 >SB_38289| Best HMM Match : No HMM Matches (HMM E-Value=.) Length = 560 Score = 59.3 bits (137), Expect = 1e-09 Identities = 43/115 (37%), Positives = 59/115 (51%) Frame = +3 Query: 3 FTAWCNSHLRKAGTGIENIEDDFRNGLKLMLLLEVISGETLPKPDRGKMRFHKIANVNKA 182 FT W NSHL++ G + + D ++G KL+LLLEV+SGE L H + NV A Sbjct: 47 FTKWINSHLQRVGARVNELYHDLQDGRKLILLLEVLSGEKL---------VH-LENVG-A 95 Query: 183 LDFIASKGVKLVSIGAEEIVDGNLKMTLGMIWTIILRFAIQDISVEEMTAKEGLL 347 D + DGN K+TLG+IWTIILRF + + + + LL Sbjct: 96 HDIV----------------DGNQKITLGLIWTIILRFQVFYTDTDAIVLMDRLL 134 >SB_40303| Best HMM Match : CH (HMM E-Value=5.1e-10) Length = 82 Score = 58.0 bits (134), Expect = 3e-09 Identities = 41/98 (41%), Positives = 53/98 (54%) Frame = +3 Query: 3 FTAWCNSHLRKAGTGIENIEDDFRNGLKLMLLLEVISGETLPKPDRGKMRFHKIANVNKA 182 FT W NSHL++ G + + D ++G KL+LLLEV+SGE L H + NV A Sbjct: 11 FTKWINSHLQRVGARVNELYHDLQDGRKLILLLEVLSGEKL---------VH-LENVG-A 59 Query: 183 LDFIASKGVKLVSIGAEEIVDGNLKMTLGMIWTIILRF 296 D + DGN K+TLG+IWTIILRF Sbjct: 60 HDIV----------------DGNQKITLGLIWTIILRF 81 >SB_30962| Best HMM Match : No HMM Matches (HMM E-Value=.) Length = 733 Score = 57.2 bits (132), Expect = 5e-09 Identities = 30/100 (30%), Positives = 56/100 (56%), Gaps = 2/100 (2%) Frame = +3 Query: 3 FTAWCNSHLRK--AGTGIENIEDDFRNGLKLMLLLEVISGETLPKPDRGKMRFHKIANVN 176 +TAW NS L+K I+N+ D ++G+ + L+EV++GE+L + NV+ Sbjct: 133 YTAWVNSQLKKRPGSRVIQNLPIDMKDGVAFIQLIEVVAGESLHLNENPTSMAAMKDNVD 192 Query: 177 KALDFIASKGVKLVSIGAEEIVDGNLKMTLGMIWTIILRF 296 + L F+A +K+ ++EI++G+LK + +I + F Sbjct: 193 QVLQFMAVNKIKMHHTSSKEILEGSLKAIMRLILALAAHF 232 >SB_51904| Best HMM Match : CH (HMM E-Value=0.0058) Length = 1187 Score = 49.6 bits (113), Expect = 1e-06 Identities = 26/85 (30%), Positives = 49/85 (57%), Gaps = 11/85 (12%) Frame = +3 Query: 198 SKGVKLVSIGAEEIVDGNLKMTLGMIWTIILRFAIQDISVE----------EMTAKEGLL 347 +K VK+V I +I DG + LG++W+IILRF +Q++ E + ++ LL Sbjct: 71 TKLVKMVGINNTDIADGKVMTILGLVWSIILRFQVQEVMNESEPSTPGGSQDFNVEKKLL 130 Query: 348 LWCQRKTAPYKN-VNVQNLHLSFKD 419 +WC+ Y++ V +++ +S++D Sbjct: 131 IWCEETLDGYEDVVKLKDFTVSWRD 155 >SB_2412| Best HMM Match : No HMM Matches (HMM E-Value=.) Length = 589 Score = 48.4 bits (110), Expect = 2e-06 Identities = 23/51 (45%), Positives = 35/51 (68%), Gaps = 3/51 (5%) Frame = -3 Query: 320 FN*DVLDGEAENNGPNHTKSHLKVTIDDFF--GTN*HKLHTF*GDEVE-CL 177 F+ ++LD + +NNGPNH+K H KV+I DF+ T H + T+ D+V+ CL Sbjct: 43 FDCNILDSKPQNNGPNHSKGHFKVSIYDFYRAKTQRHVMQTYLPDQVDLCL 93 >SB_640| Best HMM Match : No HMM Matches (HMM E-Value=.) Length = 917 Score = 46.4 bits (105), Expect = 1e-05 Identities = 32/136 (23%), Positives = 60/136 (44%), Gaps = 2/136 (1%) Frame = +3 Query: 3 FTAWCNSHLRKAG-TGIENIEDDFRNGLKLMLLLEVISGETLPKP-DRGKMRFHKIANVN 176 +T W N +++ I +I +G L+ +LEV++ E +P + R K+ N+ Sbjct: 156 YTIWTNLLMKRGRHRQITDIRKSIGDGQTLVYMLEVLAQEKIPGVYAKPVTRAQKLENLQ 215 Query: 177 KALDFIASKGVKLVSIGAEEIVDGNLKMTLGMIWTIILRFAIQDISVEEMTAKEGLLLWC 356 + F+ ++ + L I +++DGNLK L + + RF + + T Sbjct: 216 LCMSFMGNREINLQGIYVGDLIDGNLKSILALCGNLRRRFEGSSENTPDGTRPPSSQSTK 275 Query: 357 QRKTAPYKNVNVQNLH 404 +TAP +N H Sbjct: 276 TNETAPSYKMNGHTSH 291 >SB_28852| Best HMM Match : No HMM Matches (HMM E-Value=.) Length = 3172 Score = 44.8 bits (101), Expect = 3e-05 Identities = 34/107 (31%), Positives = 51/107 (47%), Gaps = 10/107 (9%) Frame = +3 Query: 48 IENIEDDFRNGLKLMLLLEVISGE-----TLPKPDRGKMRFHKIANVNKALDFIASKGVK 212 + NI D R+GL+L ++E++S TL P R KI NV L + GV Sbjct: 1057 VTNIATDLRDGLRLTRVVELLSHNWRLTSTLRVP--AISRLQKIHNVEVVLKALKDHGVP 1114 Query: 213 L-----VSIGAEEIVDGNLKMTLGMIWTIILRFAIQDISVEEMTAKE 338 + I IVDG+ + TL ++W II+ F + + EE +E Sbjct: 1115 VGEGEGSGITPRHIVDGHREKTLNLLWMIIVNFQVNILLSEEKLKEE 1161 >SB_47648| Best HMM Match : No HMM Matches (HMM E-Value=.) Length = 65 Score = 43.2 bits (97), Expect = 9e-05 Identities = 16/32 (50%), Positives = 25/32 (78%) Frame = +3 Query: 207 VKLVSIGAEEIVDGNLKMTLGMIWTIILRFAI 302 ++L++I +IVDGN KMTLG+IW++I F + Sbjct: 1 IRLINISNNDIVDGNHKMTLGLIWSVIAHFQV 32 >SB_59804| Best HMM Match : No HMM Matches (HMM E-Value=.) Length = 676 Score = 40.7 bits (91), Expect = 5e-04 Identities = 18/41 (43%), Positives = 27/41 (65%) Frame = +3 Query: 3 FTAWCNSHLRKAGTGIENIEDDFRNGLKLMLLLEVISGETL 125 FT W NS L K+G + ++ +D +G L+ LLE+ISGE + Sbjct: 56 FTKWVNSFLDKSGLHVNDLFEDLADGKILISLLEIISGEKI 96 >SB_595| Best HMM Match : CH (HMM E-Value=0) Length = 905 Score = 37.5 bits (83), Expect = 0.004 Identities = 32/132 (24%), Positives = 59/132 (44%), Gaps = 11/132 (8%) Frame = +3 Query: 3 FTAWCNSHLRKAGTGIENIEDDFRNGLKLMLLLE-----VISGETLPKPDRGKM--RFHK 161 F W NS K ++N+ D +G+ L L + +++ + + KP KM + K Sbjct: 678 FRNWINSLGIKPF--VQNLYLDLDDGMILFQLFDQVQPGIVNYDKVNKPPFKKMGAKMKK 735 Query: 162 IANVNKALDFIASKGVKLVSIGAEEIVDGNLKMTLGMIWTIILRF---AIQDISVEEMTA 332 + N N A+ LV +G ++I DGN + L ++W + + +Q + E Sbjct: 736 LENCNYAISVADLLKFSLVGVGGKDINDGNKMLILALLWQTMRAYTLTVLQKCAGSEKPV 795 Query: 333 KEG-LLLWCQRK 365 E +++W K Sbjct: 796 TEAEIVVWVNEK 807 >SB_39164| Best HMM Match : RNB (HMM E-Value=0) Length = 597 Score = 35.5 bits (78), Expect = 0.018 Identities = 13/32 (40%), Positives = 25/32 (78%) Frame = +3 Query: 324 MTAKEGLLLWCQRKTAPYKNVNVQNLHLSFKD 419 +T K L+ WC+++T+ Y++VNV++L S++D Sbjct: 534 LTGKAALVEWCRQQTSGYRDVNVRDLTHSWRD 565 >SB_40161| Best HMM Match : CH (HMM E-Value=4.3e-30) Length = 144 Score = 33.9 bits (74), Expect = 0.055 Identities = 12/26 (46%), Positives = 20/26 (76%) Frame = +3 Query: 342 LLLWCQRKTAPYKNVNVQNLHLSFKD 419 LL WCQ++T YK+V++ ++ S+KD Sbjct: 6 LLKWCQKQTKSYKHVDINDMSSSWKD 31 >SB_15403| Best HMM Match : CH (HMM E-Value=0) Length = 1907 Score = 33.9 bits (74), Expect = 0.055 Identities = 21/90 (23%), Positives = 41/90 (45%), Gaps = 4/90 (4%) Frame = +3 Query: 162 IANVNKALDFIASKGVKLVSIGAEEIVDGNLKMTLGMIWTIILRFAIQDIS----VEEMT 329 I N N A+D L+ I ++I +G +TLG+IW ++ + ++ ++ Sbjct: 371 IENCNYAVDLGKQFNFSLIGIQGQDIHEGVQNLTLGLIWQMMRAYTYTLLARLSPDDDHM 430 Query: 330 AKEGLLLWCQRKTAPYKNVNVQNLHLSFKD 419 +E ++ W + K ++ N FKD Sbjct: 431 TEEKIVEWVNKTLQSKKKTHLINKGHGFKD 460 Score = 31.5 bits (68), Expect = 0.29 Identities = 16/60 (26%), Positives = 29/60 (48%) Frame = +3 Query: 108 ISGETLPKPDRGKMRFHKIANVNKALDFIASKGVKLVSIGAEEIVDGNLKMTLGMIWTII 287 I + KP H+ N ++ + G LV+IGA ++ +G + LG++W +I Sbjct: 101 IDERVINKPPLKVFTIHE--NQTLVINSALAIGCNLVNIGAGDLAEGKKHLVLGVLWQVI 158 >SB_47035| Best HMM Match : No HMM Matches (HMM E-Value=.) Length = 324 Score = 33.5 bits (73), Expect = 0.073 Identities = 35/102 (34%), Positives = 45/102 (44%), Gaps = 2/102 (1%) Frame = -1 Query: 340 PSFAVISSTEMSWMAKRRIMVQIIPRVI-LRLPSTISSAPIDTSFTPFEAMKSSALLT-L 167 PS A I + S AK IM P + P T SSA I T FTP A S L T Sbjct: 218 PSSAKIMTPFTSSRAK--IMTPFTPSSAEIMTPFTPSSAKIMTPFTPSSAKIMSPLTTSS 275 Query: 166 AILWNRILPRSGLGRVSPEMTSSSNMSFRPLRKSSSMFSMPV 41 A + + + P S ++ +T SS PL SS+ P+ Sbjct: 276 AKIMSPLTPSS--AKIMSPLTPSSAKIMSPLTTSSAKIMSPL 315 >SB_33144| Best HMM Match : No HMM Matches (HMM E-Value=.) Length = 563 Score = 29.5 bits (63), Expect = 1.2 Identities = 12/31 (38%), Positives = 17/31 (54%) Frame = +3 Query: 321 EMTAKEGLLLWCQRKTAPYKNVNVQNLHLSF 413 +M+ +L WC+ T YK VN+ N SF Sbjct: 447 QMSVSSLILTWCKDVTEGYKGVNITNFSGSF 477 >SB_25577| Best HMM Match : Mab-21 (HMM E-Value=1e-05) Length = 492 Score = 28.7 bits (61), Expect = 2.1 Identities = 11/19 (57%), Positives = 16/19 (84%) Frame = -3 Query: 398 VLDIDILVRRCLTLTPEQQ 342 VL++DI+V C TL+PE+Q Sbjct: 129 VLELDIMVTSCHTLSPEEQ 147 >SB_12109| Best HMM Match : No HMM Matches (HMM E-Value=.) Length = 4085 Score = 27.9 bits (59), Expect = 3.6 Identities = 16/50 (32%), Positives = 24/50 (48%), Gaps = 3/50 (6%) Frame = -3 Query: 377 VRRCLTLTPEQQTFLCGHFF---N*DVLDGEAENNGPNHTKSHLKVTIDD 237 + RCL E + + F+ N D+LD A N PN + HL+ D+ Sbjct: 773 IHRCLEDYLETKRLVFSRFYFLSNEDLLDILANNKNPNAVQPHLRKCFDN 822 >SB_25948| Best HMM Match : Globin (HMM E-Value=1.5e-18) Length = 223 Score = 27.5 bits (58), Expect = 4.8 Identities = 18/51 (35%), Positives = 22/51 (43%) Frame = -3 Query: 416 LERQVQVLDIDILVRRCLTLTPEQQTFLCGHFFN*DVLDGEAENNGPNHTK 264 LE L I+I +R C P Q+FLC F V+D E H K Sbjct: 49 LESNKGELGIEIFLRVCY---PPAQSFLCRTFPLLHVIDAEQRKRAKRHRK 96 >SB_48827| Best HMM Match : No HMM Matches (HMM E-Value=.) Length = 683 Score = 27.1 bits (57), Expect = 6.3 Identities = 10/17 (58%), Positives = 15/17 (88%) Frame = +3 Query: 84 KLMLLLEVISGETLPKP 134 K +L+++VISG+ LPKP Sbjct: 625 KKLLIIQVISGQQLPKP 641 >SB_39070| Best HMM Match : No HMM Matches (HMM E-Value=.) Length = 539 Score = 27.1 bits (57), Expect = 6.3 Identities = 18/75 (24%), Positives = 32/75 (42%) Frame = +3 Query: 51 ENIEDDFRNGLKLMLLLEVISGETLPKPDRGKMRFHKIANVNKALDFIASKGVKLVSIGA 230 E + R+G+ L + I +PK F N++K LDF + + L + Sbjct: 303 ETFAEPLRSGVILCKIANKIKSNAIPKIGESNKSFVMQENISKFLDF-CERVLGLDRLNL 361 Query: 231 EEIVDGNLKMTLGMI 275 + VD + +GM+ Sbjct: 362 FQTVDLFERQNVGMV 376 >SB_33733| Best HMM Match : CYTH (HMM E-Value=2.1e-05) Length = 230 Score = 26.6 bits (56), Expect = 8.3 Identities = 14/36 (38%), Positives = 21/36 (58%), Gaps = 1/36 (2%) Frame = +1 Query: 142 AKCDSTKSLTSTRHSTSSPQKV*S-LCQLVPKKSSM 246 A+CD T S+T H TS K+ + L + VP +S+ Sbjct: 114 ARCDPTISITDKYHETSDETKIMTELSKHVPMATSL 149 >SB_21165| Best HMM Match : LRR_1 (HMM E-Value=6.5e-13) Length = 1383 Score = 26.6 bits (56), Expect = 8.3 Identities = 13/29 (44%), Positives = 16/29 (55%) Frame = -3 Query: 89 ELQAIAEVVLDVLDAGASFSEVTVAPCCE 3 EL A + V DV G F+E+ V P CE Sbjct: 1091 ELVAAIKSVTDVRYPGIKFNELLVCPVCE 1119 Database: nematostella Posted date: Oct 22, 2007 1:22 PM Number of letters in database: 16,821,457 Number of sequences in database: 59,808 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 12,806,420 Number of Sequences: 59808 Number of extensions: 245546 Number of successful extensions: 800 Number of sequences better than 10.0: 26 Number of HSP's better than 10.0 without gapping: 737 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 792 length of database: 16,821,457 effective HSP length: 75 effective length of database: 12,335,857 effective search space used: 789494848 frameshift window, decay const: 40, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 41 (21.7 bits)
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