BLASTX 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= brS-1192 (337 letters) Database: uniref50 1,657,284 sequences; 575,637,011 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value UniRef50_Q96K17 Cluster: Transcription factor BTF3 homolog 4; n=... 75 4e-13 UniRef50_Q13892 Cluster: Transcription factor BTF3 homolog 3; n=... 66 2e-10 UniRef50_Q2PQI9 Cluster: BTF3-like transcription factor; n=6; Ma... 56 1e-07 UniRef50_UPI0000D9DD8A Cluster: PREDICTED: similar to basic tran... 56 2e-07 UniRef50_Q5YET6 Cluster: Transcription factor BTF3; n=1; Bigelow... 56 2e-07 UniRef50_Q93ZB5 Cluster: At1g17880/F2H15_10; n=20; Viridiplantae... 55 4e-07 UniRef50_Q2U6N1 Cluster: Nascent polypeptide-associated complex ... 50 1e-05 UniRef50_UPI000155321F Cluster: PREDICTED: similar to Btf3 prote... 48 5e-05 UniRef50_Q5CX56 Cluster: BTF domain, basal transcription factor;... 46 2e-04 UniRef50_A0CH86 Cluster: Chromosome undetermined scaffold_18, wh... 45 4e-04 UniRef50_Q4UDF4 Cluster: Transcription factor btf3 homolog, puta... 44 9e-04 UniRef50_UPI0000D9B4C6 Cluster: PREDICTED: basic transcription f... 42 0.004 UniRef50_Q54TR8 Cluster: Putative uncharacterized protein; n=1; ... 40 0.008 UniRef50_Q6C2F3 Cluster: Nascent polypeptide-associated complex ... 40 0.008 UniRef50_Q0IGS9 Cluster: RT01104p; n=4; Drosophila melanogaster|... 36 0.24 UniRef50_Q6A1N2 Cluster: Transcription factor BTF3; n=1; Euplote... 35 0.31 UniRef50_Q751F1 Cluster: Nascent polypeptide-associated complex ... 34 0.55 UniRef50_UPI0000F2C851 Cluster: PREDICTED: similar to BTF3a; n=1... 33 1.7 UniRef50_A5DF06 Cluster: Nascent polypeptide-associated complex ... 33 1.7 UniRef50_Q8LC03 Cluster: Homeobox-leucine zipper protein ATHB-13... 31 3.8 UniRef50_Q9VY38 Cluster: CG18157-PA; n=1; Drosophila melanogaste... 31 5.1 UniRef50_A2GI66 Cluster: Putative uncharacterized protein; n=14;... 31 6.7 UniRef50_Q02642 Cluster: Nascent polypeptide-associated complex ... 31 6.7 UniRef50_UPI0001553282 Cluster: PREDICTED: RIKEN cDNA 4930505D03... 30 8.9 UniRef50_A7A714 Cluster: Putative uncharacterized protein; n=1; ... 30 8.9 UniRef50_Q4Q138 Cluster: Basic transcription factor 3a, putative... 30 8.9 >UniRef50_Q96K17 Cluster: Transcription factor BTF3 homolog 4; n=59; Eukaryota|Rep: Transcription factor BTF3 homolog 4 - Homo sapiens (Human) Length = 158 Score = 74.5 bits (175), Expect = 4e-13 Identities = 36/56 (64%), Positives = 39/56 (69%) Frame = +2 Query: 170 RKKVVHVTAATDDXXXXXXXXXXXVNTIPGIEEVNMIKEDGTVIHFNNPKAQASLA 337 +KKVVH TA DD VN I GIEEVNMIK+DGTVIHFNNPK QASL+ Sbjct: 24 KKKVVHRTATADDKKLQSSLKKLAVNNIAGIEEVNMIKDDGTVIHFNNPKVQASLS 79 Score = 44.8 bits (101), Expect = 4e-04 Identities = 20/26 (76%), Positives = 23/26 (88%) Frame = +1 Query: 100 MNSEKLKKLQSQVRIGGKGTPRRKEE 177 MN EKL KLQ+QVRIGGKGT RRK++ Sbjct: 1 MNQEKLAKLQAQVRIGGKGTARRKKK 26 >UniRef50_Q13892 Cluster: Transcription factor BTF3 homolog 3; n=85; Fungi/Metazoa group|Rep: Transcription factor BTF3 homolog 3 - Homo sapiens (Human) Length = 214 Score = 65.7 bits (153), Expect = 2e-10 Identities = 35/61 (57%), Positives = 37/61 (60%) Frame = +2 Query: 155 AHRDARKKVVHVTAATDDXXXXXXXXXXXVNTIPGIEEVNMIKEDGTVIHFNNPKAQASL 334 AHR +KKV H TA DD VN I GIE+VNM GTVIHFNNPK QASL Sbjct: 56 AHR--KKKVFHRTATADDKKLQFSLKKLQVNNISGIEKVNMFTNQGTVIHFNNPKFQASL 113 Query: 335 A 337 A Sbjct: 114 A 114 Score = 36.7 bits (81), Expect = 0.10 Identities = 17/32 (53%), Positives = 23/32 (71%) Frame = +1 Query: 82 TLKNSRMNSEKLKKLQSQVRIGGKGTPRRKEE 177 T +++ KL KLQ+QVRIGGKGT RK++ Sbjct: 30 TCRSTDHEPGKLAKLQAQVRIGGKGTAHRKKK 61 >UniRef50_Q2PQI9 Cluster: BTF3-like transcription factor; n=6; Magnoliophyta|Rep: BTF3-like transcription factor - Solanum lycopersicum (Tomato) (Lycopersicon esculentum) Length = 162 Score = 56.4 bits (130), Expect = 1e-07 Identities = 30/56 (53%), Positives = 33/56 (58%) Frame = +2 Query: 170 RKKVVHVTAATDDXXXXXXXXXXXVNTIPGIEEVNMIKEDGTVIHFNNPKAQASLA 337 +KK VH T TDD VN IP IEEVN+ KED VI F NPK QAS+A Sbjct: 24 KKKAVHKTTTTDDKRLQSTLKRIGVNGIPAIEEVNIFKED-VVIQFVNPKVQASIA 78 Score = 36.7 bits (81), Expect = 0.10 Identities = 16/26 (61%), Positives = 20/26 (76%) Frame = +1 Query: 100 MNSEKLKKLQSQVRIGGKGTPRRKEE 177 MN EKL+K+ VR GGKGT RRK++ Sbjct: 1 MNVEKLQKMAGSVRTGGKGTMRRKKK 26 >UniRef50_UPI0000D9DD8A Cluster: PREDICTED: similar to basic transcription factor 3; n=1; Macaca mulatta|Rep: PREDICTED: similar to basic transcription factor 3 - Macaca mulatta Length = 372 Score = 56.0 bits (129), Expect = 2e-07 Identities = 27/49 (55%), Positives = 29/49 (59%) Frame = +2 Query: 170 RKKVVHVTAATDDXXXXXXXXXXXVNTIPGIEEVNMIKEDGTVIHFNNP 316 +KKVVH TA DD VN I GIEEVN+ GTVIHFNNP Sbjct: 29 KKKVVHRTATADDKKLQFSLKKLGVNDISGIEEVNVFTNQGTVIHFNNP 77 Score = 44.4 bits (100), Expect = 5e-04 Identities = 20/31 (64%), Positives = 25/31 (80%) Frame = +1 Query: 85 LKNSRMNSEKLKKLQSQVRIGGKGTPRRKEE 177 +K + MN EKL KLQ+QVRI GKGT RRK++ Sbjct: 1 MKETIMNQEKLAKLQAQVRISGKGTARRKKK 31 >UniRef50_Q5YET6 Cluster: Transcription factor BTF3; n=1; Bigelowiella natans|Rep: Transcription factor BTF3 - Bigelowiella natans (Pedinomonas minutissima) (Chlorarachnion sp.(strain CCMP 621)) Length = 165 Score = 55.6 bits (128), Expect = 2e-07 Identities = 26/56 (46%), Positives = 33/56 (58%) Frame = +2 Query: 170 RKKVVHVTAATDDXXXXXXXXXXXVNTIPGIEEVNMIKEDGTVIHFNNPKAQASLA 337 R+K + + DD V IP IEEVN+ K+DGTVIHF +PK QAS+A Sbjct: 29 RRKTIRKNLSHDDKRLTNTLKRLNVRDIPAIEEVNLFKDDGTVIHFASPKVQASIA 84 Score = 30.7 bits (66), Expect = 6.7 Identities = 16/36 (44%), Positives = 23/36 (63%), Gaps = 3/36 (8%) Frame = +1 Query: 103 NSEKLKKLQSQ---VRIGGKGTPRRKEEGCSRYCGH 201 N +KLK+L S+ VRIGGKG+ RR+ + + H Sbjct: 4 NPDKLKRLTSKSNSVRIGGKGSIRRRRKTIRKNLSH 39 >UniRef50_Q93ZB5 Cluster: At1g17880/F2H15_10; n=20; Viridiplantae|Rep: At1g17880/F2H15_10 - Arabidopsis thaliana (Mouse-ear cress) Length = 165 Score = 54.8 bits (126), Expect = 4e-07 Identities = 29/56 (51%), Positives = 34/56 (60%) Frame = +2 Query: 170 RKKVVHVTAATDDXXXXXXXXXXXVNTIPGIEEVNMIKEDGTVIHFNNPKAQASLA 337 +KK VH T TDD VN+IP IEEVN+ K+D VI F NPK QAS+A Sbjct: 24 KKKAVHKTNTTDDKRLQSTLKRIGVNSIPPIEEVNIFKDD-VVIQFINPKVQASIA 78 Score = 36.3 bits (80), Expect = 0.14 Identities = 16/26 (61%), Positives = 20/26 (76%) Frame = +1 Query: 100 MNSEKLKKLQSQVRIGGKGTPRRKEE 177 MN EKL K+ + VR GGKGT RRK++ Sbjct: 1 MNREKLMKMANTVRTGGKGTVRRKKK 26 >UniRef50_Q2U6N1 Cluster: Nascent polypeptide-associated complex subunit beta; n=4; Pezizomycotina|Rep: Nascent polypeptide-associated complex subunit beta - Aspergillus oryzae Length = 196 Score = 50.0 bits (114), Expect = 1e-05 Identities = 25/53 (47%), Positives = 28/53 (52%) Frame = +2 Query: 176 KVVHVTAATDDXXXXXXXXXXXVNTIPGIEEVNMIKEDGTVIHFNNPKAQASL 334 K VH ++ DD V I IEEVNM KEDG VIHF PK AS+ Sbjct: 67 KKVHKSSGADDKKLQATLKKMNVQPIQAIEEVNMFKEDGNVIHFGAPKVHASV 119 >UniRef50_UPI000155321F Cluster: PREDICTED: similar to Btf3 protein; n=3; Mus musculus|Rep: PREDICTED: similar to Btf3 protein - Mus musculus Length = 260 Score = 47.6 bits (108), Expect = 5e-05 Identities = 29/66 (43%), Positives = 32/66 (48%), Gaps = 10/66 (15%) Frame = +2 Query: 170 RKKVVHVTAATDDXXXXXXXXXXXVNT----------IPGIEEVNMIKEDGTVIHFNNPK 319 RKKV H TA+ D N + GIEEVN GTV+HFNNPK Sbjct: 42 RKKVAHRTASADGKTTTTNNKTKQNNNKKKTVVLLKEVRGIEEVNTFTNQGTVVHFNNPK 101 Query: 320 AQASLA 337 QASLA Sbjct: 102 VQASLA 107 >UniRef50_Q5CX56 Cluster: BTF domain, basal transcription factor; n=3; Cryptosporidium|Rep: BTF domain, basal transcription factor - Cryptosporidium parvum Iowa II Length = 186 Score = 45.6 bits (103), Expect = 2e-04 Identities = 19/30 (63%), Positives = 24/30 (80%) Frame = +2 Query: 248 TIPGIEEVNMIKEDGTVIHFNNPKAQASLA 337 T P I EV M+K+DGT +HF+NPK QAS+A Sbjct: 87 TFPAIGEVTMMKKDGTCLHFSNPKLQASVA 116 >UniRef50_A0CH86 Cluster: Chromosome undetermined scaffold_18, whole genome shotgun sequence; n=4; Oligohymenophorea|Rep: Chromosome undetermined scaffold_18, whole genome shotgun sequence - Paramecium tetraurelia Length = 168 Score = 44.8 bits (101), Expect = 4e-04 Identities = 20/55 (36%), Positives = 29/55 (52%) Frame = +2 Query: 170 RKKVVHVTAATDDXXXXXXXXXXXVNTIPGIEEVNMIKEDGTVIHFNNPKAQASL 334 + K VH T DD V + I+EVN K+D T+IHF+ P+ QA++ Sbjct: 36 KHKNVHQTQINDDKKLKQVIKKFGVQQLGNIDEVNFFKDDNTIIHFSKPEVQAAI 90 >UniRef50_Q4UDF4 Cluster: Transcription factor btf3 homolog, putative; n=3; Piroplasmida|Rep: Transcription factor btf3 homolog, putative - Theileria annulata Length = 164 Score = 43.6 bits (98), Expect = 9e-04 Identities = 23/56 (41%), Positives = 30/56 (53%), Gaps = 1/56 (1%) Frame = +2 Query: 167 ARKKVVHVTAAT-DDXXXXXXXXXXXVNTIPGIEEVNMIKEDGTVIHFNNPKAQAS 331 AR+K+ T DD IPGIEEV ++KEDGT + F+NPK Q + Sbjct: 41 ARRKLKKTTKFVGDDKRLQFALRSIGAANIPGIEEVQILKEDGTFLTFSNPKIQTA 96 >UniRef50_UPI0000D9B4C6 Cluster: PREDICTED: basic transcription factor 3 isoform 1; n=4; Eutheria|Rep: PREDICTED: basic transcription factor 3 isoform 1 - Macaca mulatta Length = 168 Score = 41.5 bits (93), Expect = 0.004 Identities = 18/24 (75%), Positives = 19/24 (79%) Frame = +2 Query: 266 EVNMIKEDGTVIHFNNPKAQASLA 337 +VNM GTVIHFNNPK QASLA Sbjct: 67 KVNMFTNQGTVIHFNNPKVQASLA 90 Score = 35.9 bits (79), Expect = 0.18 Identities = 16/23 (69%), Positives = 19/23 (82%) Frame = +1 Query: 85 LKNSRMNSEKLKKLQSQVRIGGK 153 +K + MN EKL KLQ+QVRIGGK Sbjct: 45 MKETIMNQEKLAKLQAQVRIGGK 67 >UniRef50_Q54TR8 Cluster: Putative uncharacterized protein; n=1; Dictyostelium discoideum AX4|Rep: Putative uncharacterized protein - Dictyostelium discoideum AX4 Length = 142 Score = 40.3 bits (90), Expect = 0.008 Identities = 19/55 (34%), Positives = 26/55 (47%), Gaps = 1/55 (1%) Frame = +2 Query: 170 RKKVVHV-TAATDDXXXXXXXXXXXVNTIPGIEEVNMIKEDGTVIHFNNPKAQAS 331 +++V H T + DD V I +EE N K DG +IHF NP Q + Sbjct: 27 KQQVTHKSTTSVDDKKLHVKLANLGVKPIGAVEEANFFKADGNIIHFKNPSVQTA 81 >UniRef50_Q6C2F3 Cluster: Nascent polypeptide-associated complex subunit beta; n=1; Yarrowia lipolytica|Rep: Nascent polypeptide-associated complex subunit beta - Yarrowia lipolytica (Candida lipolytica) Length = 162 Score = 40.3 bits (90), Expect = 0.008 Identities = 21/55 (38%), Positives = 26/55 (47%) Frame = +2 Query: 173 KKVVHVTAATDDXXXXXXXXXXXVNTIPGIEEVNMIKEDGTVIHFNNPKAQASLA 337 KKV + D+ I GI EVNM KEDGTV+HF + S+A Sbjct: 30 KKVAGRNISEDEKKLSATLKKFNAQEITGISEVNMFKEDGTVLHFPKVHVEGSVA 84 >UniRef50_Q0IGS9 Cluster: RT01104p; n=4; Drosophila melanogaster|Rep: RT01104p - Drosophila melanogaster (Fruit fly) Length = 262 Score = 35.5 bits (78), Expect = 0.24 Identities = 15/26 (57%), Positives = 21/26 (80%) Frame = +1 Query: 100 MNSEKLKKLQSQVRIGGKGTPRRKEE 177 M+ +KLKK++ VRIGGKG+ RRK + Sbjct: 1 MDFKKLKKMEEAVRIGGKGSMRRKHK 26 >UniRef50_Q6A1N2 Cluster: Transcription factor BTF3; n=1; Euplotes vannus|Rep: Transcription factor BTF3 - Euplotes vannus Length = 157 Score = 35.1 bits (77), Expect = 0.31 Identities = 18/54 (33%), Positives = 25/54 (46%) Frame = +2 Query: 173 KKVVHVTAATDDXXXXXXXXXXXVNTIPGIEEVNMIKEDGTVIHFNNPKAQASL 334 KKV +D V ++P IEEVN K+D TV++F P S+ Sbjct: 34 KKVNKKADKNEDKKLKQQLKKFNVQSLPDIEEVNFFKDDDTVMNFKRPAVDFSV 87 >UniRef50_Q751F1 Cluster: Nascent polypeptide-associated complex subunit beta; n=4; Saccharomycetales|Rep: Nascent polypeptide-associated complex subunit beta - Ashbya gossypii (Yeast) (Eremothecium gossypii) Length = 161 Score = 34.3 bits (75), Expect = 0.55 Identities = 18/57 (31%), Positives = 25/57 (43%) Frame = +2 Query: 161 RDARKKVVHVTAATDDXXXXXXXXXXXVNTIPGIEEVNMIKEDGTVIHFNNPKAQAS 331 R KK +A DD T+ +EE N K+DG+V+HFN Q + Sbjct: 25 RKLAKKSGTASANKDDSKLQAQLAKLKAVTMDQVEEANFFKDDGSVLHFNKVGVQVA 81 >UniRef50_UPI0000F2C851 Cluster: PREDICTED: similar to BTF3a; n=1; Monodelphis domestica|Rep: PREDICTED: similar to BTF3a - Monodelphis domestica Length = 131 Score = 32.7 bits (71), Expect = 1.7 Identities = 17/54 (31%), Positives = 26/54 (48%) Frame = +2 Query: 170 RKKVVHVTAATDDXXXXXXXXXXXVNTIPGIEEVNMIKEDGTVIHFNNPKAQAS 331 +KKV+ T + D VN EEV + GT+I+FN+P+ A+ Sbjct: 49 KKKVIPRTVSADYEKLQISLKKREVNNTSVTEEVTVFNNLGTIIYFNSPEVLAA 102 >UniRef50_A5DF06 Cluster: Nascent polypeptide-associated complex subunit beta; n=2; Pichia guilliermondii|Rep: Nascent polypeptide-associated complex subunit beta - Pichia guilliermondii (Yeast) (Candida guilliermondii) Length = 151 Score = 32.7 bits (71), Expect = 1.7 Identities = 16/54 (29%), Positives = 22/54 (40%) Frame = +2 Query: 170 RKKVVHVTAATDDXXXXXXXXXXXVNTIPGIEEVNMIKEDGTVIHFNNPKAQAS 331 R K V + DD + +EE N KEDG V+HF Q++ Sbjct: 23 RVKAKKVKSEQDDTKLMEALGKLKATKVNAVEEANFFKEDGKVLHFKRVGVQSA 76 >UniRef50_Q8LC03 Cluster: Homeobox-leucine zipper protein ATHB-13; n=5; core eudicotyledons|Rep: Homeobox-leucine zipper protein ATHB-13 - Arabidopsis thaliana (Mouse-ear cress) Length = 294 Score = 31.5 bits (68), Expect = 3.8 Identities = 22/78 (28%), Positives = 36/78 (46%) Frame = +1 Query: 73 TQFTLKNSRMNSEKLKKLQSQVRIGGKGTPRRKEEGCSRYCGHR*QKTAVIAQKVVSEHN 252 +Q K R+N E++K L+ +G K P RK + +R G + ++ A+ Q + Sbjct: 80 SQMGEKKRRLNMEQVKTLEKNFELGNKLEPERKMQ-LARALGLQPRQIAIWFQNRRARWK 138 Query: 253 SWHRRGKYDQRGRYCDTL 306 + YD R DTL Sbjct: 139 TKQLEKDYDTLKRQFDTL 156 >UniRef50_Q9VY38 Cluster: CG18157-PA; n=1; Drosophila melanogaster|Rep: CG18157-PA - Drosophila melanogaster (Fruit fly) Length = 197 Score = 31.1 bits (67), Expect = 5.1 Identities = 13/26 (50%), Positives = 19/26 (73%) Frame = +1 Query: 100 MNSEKLKKLQSQVRIGGKGTPRRKEE 177 M+ + LKK++ VRIGG G+ RRK + Sbjct: 1 MDFKTLKKMEEAVRIGGNGSMRRKHK 26 >UniRef50_A2GI66 Cluster: Putative uncharacterized protein; n=14; Trichomonas vaginalis G3|Rep: Putative uncharacterized protein - Trichomonas vaginalis G3 Length = 397 Score = 30.7 bits (66), Expect = 6.7 Identities = 24/68 (35%), Positives = 31/68 (45%), Gaps = 1/68 (1%) Frame = -2 Query: 336 ASDACAFGLLKCITVPSSLIIFTSSMPGIVFTDNFLSDDCSFLSSVAAVT*TTFFL-ASR 160 +S C K S +SS + T FLS CSFLSS T +FL +SR Sbjct: 277 SSSRCFLSSSKYFLSCSRCSFLSSSCSFLSSTKYFLSSSCSFLSS------TKYFLFSSR 330 Query: 159 CALTADAY 136 C L++ Y Sbjct: 331 CFLSSTKY 338 >UniRef50_Q02642 Cluster: Nascent polypeptide-associated complex subunit beta-1; n=5; Saccharomycetales|Rep: Nascent polypeptide-associated complex subunit beta-1 - Saccharomyces cerevisiae (Baker's yeast) Length = 157 Score = 30.7 bits (66), Expect = 6.7 Identities = 12/28 (42%), Positives = 16/28 (57%) Frame = +2 Query: 248 TIPGIEEVNMIKEDGTVIHFNNPKAQAS 331 TI + E N K+DG V+HFN Q + Sbjct: 55 TIDNVAEANFFKDDGKVMHFNKVGVQVA 82 >UniRef50_UPI0001553282 Cluster: PREDICTED: RIKEN cDNA 4930505D03 gene; n=2; Mus musculus|Rep: PREDICTED: RIKEN cDNA 4930505D03 gene - Mus musculus Length = 963 Score = 30.3 bits (65), Expect = 8.9 Identities = 11/35 (31%), Positives = 20/35 (57%) Frame = +1 Query: 178 GCSRYCGHR*QKTAVIAQKVVSEHNSWHRRGKYDQ 282 GCS YCG ++ V+ ++V+ + W++ Y Q Sbjct: 339 GCSSYCGQEAEQDRVVLKRVLLAYARWNKNVGYCQ 373 >UniRef50_A7A714 Cluster: Putative uncharacterized protein; n=1; Bifidobacterium adolescentis L2-32|Rep: Putative uncharacterized protein - Bifidobacterium adolescentis L2-32 Length = 76 Score = 30.3 bits (65), Expect = 8.9 Identities = 15/47 (31%), Positives = 27/47 (57%), Gaps = 1/47 (2%) Frame = +1 Query: 40 SVIKKCPVLT-LTQFTLKNSRMNSEKLKKLQSQVRIGGKGTPRRKEE 177 +V ++CPV+ QF N+R+N L+ + + G KG PR+ ++ Sbjct: 30 AVCRQCPVIDECRQFADHNNRINGYPLQGIWGGRQYGVKGRPRKAQQ 76 >UniRef50_Q4Q138 Cluster: Basic transcription factor 3a, putative; n=6; Trypanosomatidae|Rep: Basic transcription factor 3a, putative - Leishmania major Length = 103 Score = 30.3 bits (65), Expect = 8.9 Identities = 15/55 (27%), Positives = 23/55 (41%) Frame = +2 Query: 170 RKKVVHVTAATDDXXXXXXXXXXXVNTIPGIEEVNMIKEDGTVIHFNNPKAQASL 334 R H + DD V I+E ++DG+ +F+ PK QAS+ Sbjct: 25 RTTKAHHKSTGDDKKVQVTLRRLGVTPFSDIDEAVFYRQDGSTYYFSKPKVQASM 79 Database: uniref50 Posted date: Oct 5, 2007 11:19 AM Number of letters in database: 575,637,011 Number of sequences in database: 1,657,284 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 301,508,557 Number of Sequences: 1657284 Number of extensions: 5093756 Number of successful extensions: 12308 Number of sequences better than 10.0: 26 Number of HSP's better than 10.0 without gapping: 12031 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 12303 length of database: 575,637,011 effective HSP length: 87 effective length of database: 431,453,303 effective search space used: 10354879272 frameshift window, decay const: 40, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 41 (21.7 bits)
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