Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= brS-1192
         (337 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ535205-1|CAD59405.1| 1201|Anopheles gambiae SMC3 protein protein.    24   1.8  
AJ697727-1|CAG26920.1|  285|Anopheles gambiae putative odorant-b...    22   7.1  
U51225-1|AAA96405.1|  692|Anopheles gambiae hexamerin protein.         21   9.4  
U50475-1|AAA93477.1|  207|Anopheles gambiae protein ( Anopheles ...    21   9.4  
AF020872-1|AAC31875.1|  692|Anopheles gambiae hexamerin A protein.     21   9.4  
AF020871-1|AAC31874.1|  692|Anopheles gambiae hexamerin A protein.     21   9.4  
AF020870-1|AAC31873.1|  692|Anopheles gambiae hexamerin A protein.     21   9.4  
AB090824-1|BAC57923.1|  298|Anopheles gambiae gag-like protein p...    21   9.4  

>AJ535205-1|CAD59405.1| 1201|Anopheles gambiae SMC3 protein protein.
          Length = 1201

 Score = 23.8 bits (49), Expect = 1.8
 Identities = 23/61 (37%), Positives = 32/61 (52%), Gaps = 2/61 (3%)
 Frame = +1

Query: 106 SEKLKKLQSQVRIGGKGTPRRKEEGCSRYCGHR*QKTAVIAQKV--VSEHNSWHRRGKYD 279
           +EK K+L+ QVR   +   RRKEE CSR    + QK   +  K    S+ +S   R K+ 
Sbjct: 338 AEKEKELE-QVRPRYEAM-RRKEEECSRELNLKEQKRKELYAKQGRGSQFSSKEERDKWI 395

Query: 280 Q 282
           Q
Sbjct: 396 Q 396


>AJ697727-1|CAG26920.1|  285|Anopheles gambiae putative
           odorant-binding protein OBPjj17 protein.
          Length = 285

 Score = 21.8 bits (44), Expect = 7.1
 Identities = 7/15 (46%), Positives = 12/15 (80%)
 Frame = +1

Query: 244 EHNSWHRRGKYDQRG 288
           +++ + R G+YDQRG
Sbjct: 245 DNDGYSRGGQYDQRG 259


>U51225-1|AAA96405.1|  692|Anopheles gambiae hexamerin protein.
          Length = 692

 Score = 21.4 bits (43), Expect = 9.4
 Identities = 9/21 (42%), Positives = 14/21 (66%)
 Frame = +2

Query: 260 IEEVNMIKEDGTVIHFNNPKA 322
           IE+   +KEDGT I+   P++
Sbjct: 341 IEDGFFVKEDGTRINLRLPES 361


>U50475-1|AAA93477.1|  207|Anopheles gambiae protein ( Anopheles
           gambiae putativearylphorin precursor, mRNA, partial cds.
           ).
          Length = 207

 Score = 21.4 bits (43), Expect = 9.4
 Identities = 9/21 (42%), Positives = 14/21 (66%)
 Frame = +2

Query: 260 IEEVNMIKEDGTVIHFNNPKA 322
           IE+   +KEDGT I+   P++
Sbjct: 9   IEDGFFVKEDGTRINLRLPES 29


>AF020872-1|AAC31875.1|  692|Anopheles gambiae hexamerin A protein.
          Length = 692

 Score = 21.4 bits (43), Expect = 9.4
 Identities = 9/21 (42%), Positives = 14/21 (66%)
 Frame = +2

Query: 260 IEEVNMIKEDGTVIHFNNPKA 322
           IE+   +KEDGT I+   P++
Sbjct: 341 IEDGFFVKEDGTRINLRLPES 361


>AF020871-1|AAC31874.1|  692|Anopheles gambiae hexamerin A protein.
          Length = 692

 Score = 21.4 bits (43), Expect = 9.4
 Identities = 9/21 (42%), Positives = 14/21 (66%)
 Frame = +2

Query: 260 IEEVNMIKEDGTVIHFNNPKA 322
           IE+   +KEDGT I+   P++
Sbjct: 341 IEDGFFVKEDGTRINLRLPES 361


>AF020870-1|AAC31873.1|  692|Anopheles gambiae hexamerin A protein.
          Length = 692

 Score = 21.4 bits (43), Expect = 9.4
 Identities = 9/21 (42%), Positives = 14/21 (66%)
 Frame = +2

Query: 260 IEEVNMIKEDGTVIHFNNPKA 322
           IE+   +KEDGT I+   P++
Sbjct: 341 IEDGFFVKEDGTRINLRLPES 361


>AB090824-1|BAC57923.1|  298|Anopheles gambiae gag-like protein
           protein.
          Length = 298

 Score = 21.4 bits (43), Expect = 9.4
 Identities = 11/34 (32%), Positives = 16/34 (47%)
 Frame = +1

Query: 58  PVLTLTQFTLKNSRMNSEKLKKLQSQVRIGGKGT 159
           P   +T FTL      +  L +  SQ+R G + T
Sbjct: 81  PAAGVTYFTLYQKVRLNPNLMEENSQIRRGNRST 114


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 329,308
Number of Sequences: 2352
Number of extensions: 6100
Number of successful extensions: 9
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9
length of database: 563,979
effective HSP length: 56
effective length of database: 432,267
effective search space used: 23774685
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)