Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= brS-1192
(337 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BC070378-1|AAH70378.1| 158|Homo sapiens basic transcription fac... 75 7e-14
BC022371-1|AAH22371.1| 158|Homo sapiens BTF3L4 protein protein. 75 7e-14
BC021004-1|AAH21004.1| 153|Homo sapiens BTF3L4 protein protein. 75 7e-14
AL445685-6|CAI17032.1| 158|Homo sapiens basic transcription fac... 75 7e-14
AL139156-5|CAI22856.1| 158|Homo sapiens basic transcription fac... 75 7e-14
AK027750-1|BAB55342.1| 158|Homo sapiens protein ( Homo sapiens ... 75 7e-14
X74070-1|CAA52200.1| 162|Homo sapiens transcription factor BTF3... 69 5e-12
X53281-1|CAA37376.1| 162|Homo sapiens general transcription fac... 69 5e-12
X53280-1|CAA37375.1| 206|Homo sapiens general transcription fac... 69 5e-12
BT007120-1|AAP35784.1| 162|Homo sapiens basic transcription fac... 69 5e-12
BC008062-1|AAH08062.1| 162|Homo sapiens basic transcription fac... 69 5e-12
AB062126-1|BAB93458.1| 162|Homo sapiens transcription factor BT... 69 5e-12
M90356-1|AAA58401.1| 214|Homo sapiens BTF3 homologue protein. 66 3e-11
M90354-1|AAA58400.1| 111|Homo sapiens BTF3 homologue protein. 66 3e-11
M90357-1|AAA58398.1| 158|Homo sapiens basic transcription facto... 42 6e-04
M90355-1|AAB04035.1| 67|Homo sapiens BTF3 homologue protein. 32 0.50
AB023201-1|BAA76828.1| 728|Homo sapiens KIAA0984 protein protein. 30 2.0
BC062736-1|AAH62736.1| 102|Homo sapiens LOC503543 protein protein. 29 2.7
>BC070378-1|AAH70378.1| 158|Homo sapiens basic transcription factor
3-like 4 protein.
Length = 158
Score = 74.5 bits (175), Expect = 7e-14
Identities = 36/56 (64%), Positives = 39/56 (69%)
Frame = +2
Query: 170 RKKVVHVTAATDDXXXXXXXXXXXVNTIPGIEEVNMIKEDGTVIHFNNPKAQASLA 337
+KKVVH TA DD VN I GIEEVNMIK+DGTVIHFNNPK QASL+
Sbjct: 24 KKKVVHRTATADDKKLQSSLKKLAVNNIAGIEEVNMIKDDGTVIHFNNPKVQASLS 79
Score = 44.8 bits (101), Expect = 7e-05
Identities = 20/26 (76%), Positives = 23/26 (88%)
Frame = +1
Query: 100 MNSEKLKKLQSQVRIGGKGTPRRKEE 177
MN EKL KLQ+QVRIGGKGT RRK++
Sbjct: 1 MNQEKLAKLQAQVRIGGKGTARRKKK 26
>BC022371-1|AAH22371.1| 158|Homo sapiens BTF3L4 protein protein.
Length = 158
Score = 74.5 bits (175), Expect = 7e-14
Identities = 36/56 (64%), Positives = 39/56 (69%)
Frame = +2
Query: 170 RKKVVHVTAATDDXXXXXXXXXXXVNTIPGIEEVNMIKEDGTVIHFNNPKAQASLA 337
+KKVVH TA DD VN I GIEEVNMIK+DGTVIHFNNPK QASL+
Sbjct: 24 KKKVVHRTATADDKKLQSSLKKLAVNNIAGIEEVNMIKDDGTVIHFNNPKVQASLS 79
Score = 44.8 bits (101), Expect = 7e-05
Identities = 20/26 (76%), Positives = 23/26 (88%)
Frame = +1
Query: 100 MNSEKLKKLQSQVRIGGKGTPRRKEE 177
MN EKL KLQ+QVRIGGKGT RRK++
Sbjct: 1 MNQEKLAKLQAQVRIGGKGTARRKKK 26
>BC021004-1|AAH21004.1| 153|Homo sapiens BTF3L4 protein protein.
Length = 153
Score = 74.5 bits (175), Expect = 7e-14
Identities = 36/56 (64%), Positives = 39/56 (69%)
Frame = +2
Query: 170 RKKVVHVTAATDDXXXXXXXXXXXVNTIPGIEEVNMIKEDGTVIHFNNPKAQASLA 337
+KKVVH TA DD VN I GIEEVNMIK+DGTVIHFNNPK QASL+
Sbjct: 19 KKKVVHRTATADDKKLQSSLKKLAVNNIAGIEEVNMIKDDGTVIHFNNPKVQASLS 74
>AL445685-6|CAI17032.1| 158|Homo sapiens basic transcription factor
3-like 4 protein.
Length = 158
Score = 74.5 bits (175), Expect = 7e-14
Identities = 36/56 (64%), Positives = 39/56 (69%)
Frame = +2
Query: 170 RKKVVHVTAATDDXXXXXXXXXXXVNTIPGIEEVNMIKEDGTVIHFNNPKAQASLA 337
+KKVVH TA DD VN I GIEEVNMIK+DGTVIHFNNPK QASL+
Sbjct: 24 KKKVVHRTATADDKKLQSSLKKLAVNNIAGIEEVNMIKDDGTVIHFNNPKVQASLS 79
Score = 44.8 bits (101), Expect = 7e-05
Identities = 20/26 (76%), Positives = 23/26 (88%)
Frame = +1
Query: 100 MNSEKLKKLQSQVRIGGKGTPRRKEE 177
MN EKL KLQ+QVRIGGKGT RRK++
Sbjct: 1 MNQEKLAKLQAQVRIGGKGTARRKKK 26
>AL139156-5|CAI22856.1| 158|Homo sapiens basic transcription factor
3-like 4 protein.
Length = 158
Score = 74.5 bits (175), Expect = 7e-14
Identities = 36/56 (64%), Positives = 39/56 (69%)
Frame = +2
Query: 170 RKKVVHVTAATDDXXXXXXXXXXXVNTIPGIEEVNMIKEDGTVIHFNNPKAQASLA 337
+KKVVH TA DD VN I GIEEVNMIK+DGTVIHFNNPK QASL+
Sbjct: 24 KKKVVHRTATADDKKLQSSLKKLAVNNIAGIEEVNMIKDDGTVIHFNNPKVQASLS 79
Score = 44.8 bits (101), Expect = 7e-05
Identities = 20/26 (76%), Positives = 23/26 (88%)
Frame = +1
Query: 100 MNSEKLKKLQSQVRIGGKGTPRRKEE 177
MN EKL KLQ+QVRIGGKGT RRK++
Sbjct: 1 MNQEKLAKLQAQVRIGGKGTARRKKK 26
>AK027750-1|BAB55342.1| 158|Homo sapiens protein ( Homo sapiens
cDNA FLJ14844 fis, clone PLACE1000133, highly similar to
TRANSCRIPTION FACTOR BTF3. ).
Length = 158
Score = 74.5 bits (175), Expect = 7e-14
Identities = 36/56 (64%), Positives = 39/56 (69%)
Frame = +2
Query: 170 RKKVVHVTAATDDXXXXXXXXXXXVNTIPGIEEVNMIKEDGTVIHFNNPKAQASLA 337
+KKVVH TA DD VN I GIEEVNMIK+DGTVIHFNNPK QASL+
Sbjct: 24 KKKVVHRTATADDKKLQSSLKKLAVNNIAGIEEVNMIKDDGTVIHFNNPKVQASLS 79
Score = 44.8 bits (101), Expect = 7e-05
Identities = 20/26 (76%), Positives = 23/26 (88%)
Frame = +1
Query: 100 MNSEKLKKLQSQVRIGGKGTPRRKEE 177
MN EKL KLQ+QVRIGGKGT RRK++
Sbjct: 1 MNQEKLAKLQAQVRIGGKGTARRKKK 26
>X74070-1|CAA52200.1| 162|Homo sapiens transcription factor BTF3
protein.
Length = 162
Score = 68.5 bits (160), Expect = 5e-12
Identities = 34/56 (60%), Positives = 35/56 (62%)
Frame = +2
Query: 170 RKKVVHVTAATDDXXXXXXXXXXXVNTIPGIEEVNMIKEDGTVIHFNNPKAQASLA 337
+KKVVH TA DD VN I GIEEVNM GTVIHFNNPK QASLA
Sbjct: 29 KKKVVHRTATADDKKLQFSLKKLGVNNISGIEEVNMFTNQGTVIHFNNPKVQASLA 84
Score = 46.8 bits (106), Expect = 2e-05
Identities = 21/31 (67%), Positives = 26/31 (83%)
Frame = +1
Query: 85 LKNSRMNSEKLKKLQSQVRIGGKGTPRRKEE 177
+K + MN EKL KLQ+QVRIGGKGT RRK++
Sbjct: 1 MKETIMNQEKLAKLQAQVRIGGKGTARRKKK 31
>X53281-1|CAA37376.1| 162|Homo sapiens general transcription factor
protein.
Length = 162
Score = 68.5 bits (160), Expect = 5e-12
Identities = 34/56 (60%), Positives = 35/56 (62%)
Frame = +2
Query: 170 RKKVVHVTAATDDXXXXXXXXXXXVNTIPGIEEVNMIKEDGTVIHFNNPKAQASLA 337
+KKVVH TA DD VN I GIEEVNM GTVIHFNNPK QASLA
Sbjct: 29 KKKVVHRTATADDKKLQFSLKKLGVNNISGIEEVNMFTNQGTVIHFNNPKVQASLA 84
Score = 46.8 bits (106), Expect = 2e-05
Identities = 21/31 (67%), Positives = 26/31 (83%)
Frame = +1
Query: 85 LKNSRMNSEKLKKLQSQVRIGGKGTPRRKEE 177
+K + MN EKL KLQ+QVRIGGKGT RRK++
Sbjct: 1 MKETIMNQEKLAKLQAQVRIGGKGTARRKKK 31
>X53280-1|CAA37375.1| 206|Homo sapiens general transcription factor
protein.
Length = 206
Score = 68.5 bits (160), Expect = 5e-12
Identities = 34/56 (60%), Positives = 35/56 (62%)
Frame = +2
Query: 170 RKKVVHVTAATDDXXXXXXXXXXXVNTIPGIEEVNMIKEDGTVIHFNNPKAQASLA 337
+KKVVH TA DD VN I GIEEVNM GTVIHFNNPK QASLA
Sbjct: 73 KKKVVHRTATADDKKLQFSLKKLGVNNISGIEEVNMFTNQGTVIHFNNPKVQASLA 128
Score = 46.8 bits (106), Expect = 2e-05
Identities = 21/31 (67%), Positives = 26/31 (83%)
Frame = +1
Query: 85 LKNSRMNSEKLKKLQSQVRIGGKGTPRRKEE 177
+K + MN EKL KLQ+QVRIGGKGT RRK++
Sbjct: 45 MKETIMNQEKLAKLQAQVRIGGKGTARRKKK 75
>BT007120-1|AAP35784.1| 162|Homo sapiens basic transcription factor
3 protein.
Length = 162
Score = 68.5 bits (160), Expect = 5e-12
Identities = 34/56 (60%), Positives = 35/56 (62%)
Frame = +2
Query: 170 RKKVVHVTAATDDXXXXXXXXXXXVNTIPGIEEVNMIKEDGTVIHFNNPKAQASLA 337
+KKVVH TA DD VN I GIEEVNM GTVIHFNNPK QASLA
Sbjct: 29 KKKVVHRTATADDKKLQFSLKKLGVNNISGIEEVNMFTNQGTVIHFNNPKVQASLA 84
Score = 46.8 bits (106), Expect = 2e-05
Identities = 21/31 (67%), Positives = 26/31 (83%)
Frame = +1
Query: 85 LKNSRMNSEKLKKLQSQVRIGGKGTPRRKEE 177
+K + MN EKL KLQ+QVRIGGKGT RRK++
Sbjct: 1 MKETIMNQEKLAKLQAQVRIGGKGTARRKKK 31
>BC008062-1|AAH08062.1| 162|Homo sapiens basic transcription factor
3 protein.
Length = 162
Score = 68.5 bits (160), Expect = 5e-12
Identities = 34/56 (60%), Positives = 35/56 (62%)
Frame = +2
Query: 170 RKKVVHVTAATDDXXXXXXXXXXXVNTIPGIEEVNMIKEDGTVIHFNNPKAQASLA 337
+KKVVH TA DD VN I GIEEVNM GTVIHFNNPK QASLA
Sbjct: 29 KKKVVHRTATADDKKLQFSLKKLGVNNISGIEEVNMFTNQGTVIHFNNPKVQASLA 84
Score = 46.8 bits (106), Expect = 2e-05
Identities = 21/31 (67%), Positives = 26/31 (83%)
Frame = +1
Query: 85 LKNSRMNSEKLKKLQSQVRIGGKGTPRRKEE 177
+K + MN EKL KLQ+QVRIGGKGT RRK++
Sbjct: 1 MKETIMNQEKLAKLQAQVRIGGKGTARRKKK 31
>AB062126-1|BAB93458.1| 162|Homo sapiens transcription factor BTF 3
protein.
Length = 162
Score = 68.5 bits (160), Expect = 5e-12
Identities = 34/56 (60%), Positives = 35/56 (62%)
Frame = +2
Query: 170 RKKVVHVTAATDDXXXXXXXXXXXVNTIPGIEEVNMIKEDGTVIHFNNPKAQASLA 337
+KKVVH TA DD VN I GIEEVNM GTVIHFNNPK QASLA
Sbjct: 29 KKKVVHRTATADDKKLQFSLKKLGVNNISGIEEVNMFTNQGTVIHFNNPKVQASLA 84
Score = 46.8 bits (106), Expect = 2e-05
Identities = 21/31 (67%), Positives = 26/31 (83%)
Frame = +1
Query: 85 LKNSRMNSEKLKKLQSQVRIGGKGTPRRKEE 177
+K + MN EKL KLQ+QVRIGGKGT RRK++
Sbjct: 1 MKETIMNQEKLAKLQAQVRIGGKGTARRKKK 31
>M90356-1|AAA58401.1| 214|Homo sapiens BTF3 homologue protein.
Length = 214
Score = 65.7 bits (153), Expect = 3e-11
Identities = 35/61 (57%), Positives = 37/61 (60%)
Frame = +2
Query: 155 AHRDARKKVVHVTAATDDXXXXXXXXXXXVNTIPGIEEVNMIKEDGTVIHFNNPKAQASL 334
AHR +KKV H TA DD VN I GIE+VNM GTVIHFNNPK QASL
Sbjct: 56 AHR--KKKVFHRTATADDKKLQFSLKKLQVNNISGIEKVNMFTNQGTVIHFNNPKFQASL 113
Query: 335 A 337
A
Sbjct: 114 A 114
Score = 36.7 bits (81), Expect = 0.018
Identities = 17/32 (53%), Positives = 23/32 (71%)
Frame = +1
Query: 82 TLKNSRMNSEKLKKLQSQVRIGGKGTPRRKEE 177
T +++ KL KLQ+QVRIGGKGT RK++
Sbjct: 30 TCRSTDHEPGKLAKLQAQVRIGGKGTAHRKKK 61
>M90354-1|AAA58400.1| 111|Homo sapiens BTF3 homologue protein.
Length = 111
Score = 65.7 bits (153), Expect = 3e-11
Identities = 34/56 (60%), Positives = 36/56 (64%)
Frame = +2
Query: 170 RKKVVHVTAATDDXXXXXXXXXXXVNTIPGIEEVNMIKEDGTVIHFNNPKAQASLA 337
RKKVVH TA +D VN IPGIEEVNM GTVIHFNNP+ QASLA
Sbjct: 27 RKKVVHTTA--EDKKFQFSLKKLGVNNIPGIEEVNMFTHQGTVIHFNNPEVQASLA 80
>M90357-1|AAA58398.1| 158|Homo sapiens basic transcription factor
3a protein.
Length = 158
Score = 41.5 bits (93), Expect = 6e-04
Identities = 18/24 (75%), Positives = 19/24 (79%)
Frame = +2
Query: 266 EVNMIKEDGTVIHFNNPKAQASLA 337
+VNM GTVIHFNNPK QASLA
Sbjct: 67 KVNMFTNQGTVIHFNNPKVQASLA 90
Score = 35.9 bits (79), Expect = 0.031
Identities = 16/23 (69%), Positives = 19/23 (82%)
Frame = +1
Query: 85 LKNSRMNSEKLKKLQSQVRIGGK 153
+K + MN EKL KLQ+QVRIGGK
Sbjct: 45 MKETIMNQEKLAKLQAQVRIGGK 67
>M90355-1|AAB04035.1| 67|Homo sapiens BTF3 homologue protein.
Length = 67
Score = 31.9 bits (69), Expect = 0.50
Identities = 19/44 (43%), Positives = 22/44 (50%)
Frame = +2
Query: 170 RKKVVHVTAATDDXXXXXXXXXXXVNTIPGIEEVNMIKEDGTVI 301
RKKVVH TA +D ++ GIEEVNM TVI
Sbjct: 26 RKKVVHRTATANDKKRQFSLKKLEIS---GIEEVNMFTNQATVI 66
Score = 30.3 bits (65), Expect = 1.5
Identities = 16/30 (53%), Positives = 21/30 (70%)
Frame = +1
Query: 85 LKNSRMNSEKLKKLQSQVRIGGKGTPRRKE 174
+K + MN EKL KLQ++V IG GT RK+
Sbjct: 1 MKETIMNQEKLAKLQAKVPIG--GTAHRKK 28
>AB023201-1|BAA76828.1| 728|Homo sapiens KIAA0984 protein protein.
Length = 728
Score = 29.9 bits (64), Expect = 2.0
Identities = 11/35 (31%), Positives = 20/35 (57%)
Frame = +1
Query: 178 GCSRYCGHR*QKTAVIAQKVVSEHNSWHRRGKYDQ 282
GCS YCG ++ V+ ++V+ + W++ Y Q
Sbjct: 109 GCSSYCGQEAEQDRVVLKRVLLAYARWNKTVGYCQ 143
>BC062736-1|AAH62736.1| 102|Homo sapiens LOC503543 protein protein.
Length = 102
Score = 29.5 bits (63), Expect = 2.7
Identities = 13/23 (56%), Positives = 16/23 (69%)
Frame = +2
Query: 269 VNMIKEDGTVIHFNNPKAQASLA 337
+N K T+IHFNNP+ QA LA
Sbjct: 1 MNQEKLQRTMIHFNNPEVQAFLA 23
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 44,029,937
Number of Sequences: 237096
Number of extensions: 802472
Number of successful extensions: 5154
Number of sequences better than 10.0: 18
Number of HSP's better than 10.0 without gapping: 5129
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5153
length of database: 76,859,062
effective HSP length: 80
effective length of database: 57,891,382
effective search space used: 1794632842
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -