BLASTX 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= brS-1192 (337 letters) Database: human 237,096 sequences; 76,859,062 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value BC070378-1|AAH70378.1| 158|Homo sapiens basic transcription fac... 75 7e-14 BC022371-1|AAH22371.1| 158|Homo sapiens BTF3L4 protein protein. 75 7e-14 BC021004-1|AAH21004.1| 153|Homo sapiens BTF3L4 protein protein. 75 7e-14 AL445685-6|CAI17032.1| 158|Homo sapiens basic transcription fac... 75 7e-14 AL139156-5|CAI22856.1| 158|Homo sapiens basic transcription fac... 75 7e-14 AK027750-1|BAB55342.1| 158|Homo sapiens protein ( Homo sapiens ... 75 7e-14 X74070-1|CAA52200.1| 162|Homo sapiens transcription factor BTF3... 69 5e-12 X53281-1|CAA37376.1| 162|Homo sapiens general transcription fac... 69 5e-12 X53280-1|CAA37375.1| 206|Homo sapiens general transcription fac... 69 5e-12 BT007120-1|AAP35784.1| 162|Homo sapiens basic transcription fac... 69 5e-12 BC008062-1|AAH08062.1| 162|Homo sapiens basic transcription fac... 69 5e-12 AB062126-1|BAB93458.1| 162|Homo sapiens transcription factor BT... 69 5e-12 M90356-1|AAA58401.1| 214|Homo sapiens BTF3 homologue protein. 66 3e-11 M90354-1|AAA58400.1| 111|Homo sapiens BTF3 homologue protein. 66 3e-11 M90357-1|AAA58398.1| 158|Homo sapiens basic transcription facto... 42 6e-04 M90355-1|AAB04035.1| 67|Homo sapiens BTF3 homologue protein. 32 0.50 AB023201-1|BAA76828.1| 728|Homo sapiens KIAA0984 protein protein. 30 2.0 BC062736-1|AAH62736.1| 102|Homo sapiens LOC503543 protein protein. 29 2.7 >BC070378-1|AAH70378.1| 158|Homo sapiens basic transcription factor 3-like 4 protein. Length = 158 Score = 74.5 bits (175), Expect = 7e-14 Identities = 36/56 (64%), Positives = 39/56 (69%) Frame = +2 Query: 170 RKKVVHVTAATDDXXXXXXXXXXXVNTIPGIEEVNMIKEDGTVIHFNNPKAQASLA 337 +KKVVH TA DD VN I GIEEVNMIK+DGTVIHFNNPK QASL+ Sbjct: 24 KKKVVHRTATADDKKLQSSLKKLAVNNIAGIEEVNMIKDDGTVIHFNNPKVQASLS 79 Score = 44.8 bits (101), Expect = 7e-05 Identities = 20/26 (76%), Positives = 23/26 (88%) Frame = +1 Query: 100 MNSEKLKKLQSQVRIGGKGTPRRKEE 177 MN EKL KLQ+QVRIGGKGT RRK++ Sbjct: 1 MNQEKLAKLQAQVRIGGKGTARRKKK 26 >BC022371-1|AAH22371.1| 158|Homo sapiens BTF3L4 protein protein. Length = 158 Score = 74.5 bits (175), Expect = 7e-14 Identities = 36/56 (64%), Positives = 39/56 (69%) Frame = +2 Query: 170 RKKVVHVTAATDDXXXXXXXXXXXVNTIPGIEEVNMIKEDGTVIHFNNPKAQASLA 337 +KKVVH TA DD VN I GIEEVNMIK+DGTVIHFNNPK QASL+ Sbjct: 24 KKKVVHRTATADDKKLQSSLKKLAVNNIAGIEEVNMIKDDGTVIHFNNPKVQASLS 79 Score = 44.8 bits (101), Expect = 7e-05 Identities = 20/26 (76%), Positives = 23/26 (88%) Frame = +1 Query: 100 MNSEKLKKLQSQVRIGGKGTPRRKEE 177 MN EKL KLQ+QVRIGGKGT RRK++ Sbjct: 1 MNQEKLAKLQAQVRIGGKGTARRKKK 26 >BC021004-1|AAH21004.1| 153|Homo sapiens BTF3L4 protein protein. Length = 153 Score = 74.5 bits (175), Expect = 7e-14 Identities = 36/56 (64%), Positives = 39/56 (69%) Frame = +2 Query: 170 RKKVVHVTAATDDXXXXXXXXXXXVNTIPGIEEVNMIKEDGTVIHFNNPKAQASLA 337 +KKVVH TA DD VN I GIEEVNMIK+DGTVIHFNNPK QASL+ Sbjct: 19 KKKVVHRTATADDKKLQSSLKKLAVNNIAGIEEVNMIKDDGTVIHFNNPKVQASLS 74 >AL445685-6|CAI17032.1| 158|Homo sapiens basic transcription factor 3-like 4 protein. Length = 158 Score = 74.5 bits (175), Expect = 7e-14 Identities = 36/56 (64%), Positives = 39/56 (69%) Frame = +2 Query: 170 RKKVVHVTAATDDXXXXXXXXXXXVNTIPGIEEVNMIKEDGTVIHFNNPKAQASLA 337 +KKVVH TA DD VN I GIEEVNMIK+DGTVIHFNNPK QASL+ Sbjct: 24 KKKVVHRTATADDKKLQSSLKKLAVNNIAGIEEVNMIKDDGTVIHFNNPKVQASLS 79 Score = 44.8 bits (101), Expect = 7e-05 Identities = 20/26 (76%), Positives = 23/26 (88%) Frame = +1 Query: 100 MNSEKLKKLQSQVRIGGKGTPRRKEE 177 MN EKL KLQ+QVRIGGKGT RRK++ Sbjct: 1 MNQEKLAKLQAQVRIGGKGTARRKKK 26 >AL139156-5|CAI22856.1| 158|Homo sapiens basic transcription factor 3-like 4 protein. Length = 158 Score = 74.5 bits (175), Expect = 7e-14 Identities = 36/56 (64%), Positives = 39/56 (69%) Frame = +2 Query: 170 RKKVVHVTAATDDXXXXXXXXXXXVNTIPGIEEVNMIKEDGTVIHFNNPKAQASLA 337 +KKVVH TA DD VN I GIEEVNMIK+DGTVIHFNNPK QASL+ Sbjct: 24 KKKVVHRTATADDKKLQSSLKKLAVNNIAGIEEVNMIKDDGTVIHFNNPKVQASLS 79 Score = 44.8 bits (101), Expect = 7e-05 Identities = 20/26 (76%), Positives = 23/26 (88%) Frame = +1 Query: 100 MNSEKLKKLQSQVRIGGKGTPRRKEE 177 MN EKL KLQ+QVRIGGKGT RRK++ Sbjct: 1 MNQEKLAKLQAQVRIGGKGTARRKKK 26 >AK027750-1|BAB55342.1| 158|Homo sapiens protein ( Homo sapiens cDNA FLJ14844 fis, clone PLACE1000133, highly similar to TRANSCRIPTION FACTOR BTF3. ). Length = 158 Score = 74.5 bits (175), Expect = 7e-14 Identities = 36/56 (64%), Positives = 39/56 (69%) Frame = +2 Query: 170 RKKVVHVTAATDDXXXXXXXXXXXVNTIPGIEEVNMIKEDGTVIHFNNPKAQASLA 337 +KKVVH TA DD VN I GIEEVNMIK+DGTVIHFNNPK QASL+ Sbjct: 24 KKKVVHRTATADDKKLQSSLKKLAVNNIAGIEEVNMIKDDGTVIHFNNPKVQASLS 79 Score = 44.8 bits (101), Expect = 7e-05 Identities = 20/26 (76%), Positives = 23/26 (88%) Frame = +1 Query: 100 MNSEKLKKLQSQVRIGGKGTPRRKEE 177 MN EKL KLQ+QVRIGGKGT RRK++ Sbjct: 1 MNQEKLAKLQAQVRIGGKGTARRKKK 26 >X74070-1|CAA52200.1| 162|Homo sapiens transcription factor BTF3 protein. Length = 162 Score = 68.5 bits (160), Expect = 5e-12 Identities = 34/56 (60%), Positives = 35/56 (62%) Frame = +2 Query: 170 RKKVVHVTAATDDXXXXXXXXXXXVNTIPGIEEVNMIKEDGTVIHFNNPKAQASLA 337 +KKVVH TA DD VN I GIEEVNM GTVIHFNNPK QASLA Sbjct: 29 KKKVVHRTATADDKKLQFSLKKLGVNNISGIEEVNMFTNQGTVIHFNNPKVQASLA 84 Score = 46.8 bits (106), Expect = 2e-05 Identities = 21/31 (67%), Positives = 26/31 (83%) Frame = +1 Query: 85 LKNSRMNSEKLKKLQSQVRIGGKGTPRRKEE 177 +K + MN EKL KLQ+QVRIGGKGT RRK++ Sbjct: 1 MKETIMNQEKLAKLQAQVRIGGKGTARRKKK 31 >X53281-1|CAA37376.1| 162|Homo sapiens general transcription factor protein. Length = 162 Score = 68.5 bits (160), Expect = 5e-12 Identities = 34/56 (60%), Positives = 35/56 (62%) Frame = +2 Query: 170 RKKVVHVTAATDDXXXXXXXXXXXVNTIPGIEEVNMIKEDGTVIHFNNPKAQASLA 337 +KKVVH TA DD VN I GIEEVNM GTVIHFNNPK QASLA Sbjct: 29 KKKVVHRTATADDKKLQFSLKKLGVNNISGIEEVNMFTNQGTVIHFNNPKVQASLA 84 Score = 46.8 bits (106), Expect = 2e-05 Identities = 21/31 (67%), Positives = 26/31 (83%) Frame = +1 Query: 85 LKNSRMNSEKLKKLQSQVRIGGKGTPRRKEE 177 +K + MN EKL KLQ+QVRIGGKGT RRK++ Sbjct: 1 MKETIMNQEKLAKLQAQVRIGGKGTARRKKK 31 >X53280-1|CAA37375.1| 206|Homo sapiens general transcription factor protein. Length = 206 Score = 68.5 bits (160), Expect = 5e-12 Identities = 34/56 (60%), Positives = 35/56 (62%) Frame = +2 Query: 170 RKKVVHVTAATDDXXXXXXXXXXXVNTIPGIEEVNMIKEDGTVIHFNNPKAQASLA 337 +KKVVH TA DD VN I GIEEVNM GTVIHFNNPK QASLA Sbjct: 73 KKKVVHRTATADDKKLQFSLKKLGVNNISGIEEVNMFTNQGTVIHFNNPKVQASLA 128 Score = 46.8 bits (106), Expect = 2e-05 Identities = 21/31 (67%), Positives = 26/31 (83%) Frame = +1 Query: 85 LKNSRMNSEKLKKLQSQVRIGGKGTPRRKEE 177 +K + MN EKL KLQ+QVRIGGKGT RRK++ Sbjct: 45 MKETIMNQEKLAKLQAQVRIGGKGTARRKKK 75 >BT007120-1|AAP35784.1| 162|Homo sapiens basic transcription factor 3 protein. Length = 162 Score = 68.5 bits (160), Expect = 5e-12 Identities = 34/56 (60%), Positives = 35/56 (62%) Frame = +2 Query: 170 RKKVVHVTAATDDXXXXXXXXXXXVNTIPGIEEVNMIKEDGTVIHFNNPKAQASLA 337 +KKVVH TA DD VN I GIEEVNM GTVIHFNNPK QASLA Sbjct: 29 KKKVVHRTATADDKKLQFSLKKLGVNNISGIEEVNMFTNQGTVIHFNNPKVQASLA 84 Score = 46.8 bits (106), Expect = 2e-05 Identities = 21/31 (67%), Positives = 26/31 (83%) Frame = +1 Query: 85 LKNSRMNSEKLKKLQSQVRIGGKGTPRRKEE 177 +K + MN EKL KLQ+QVRIGGKGT RRK++ Sbjct: 1 MKETIMNQEKLAKLQAQVRIGGKGTARRKKK 31 >BC008062-1|AAH08062.1| 162|Homo sapiens basic transcription factor 3 protein. Length = 162 Score = 68.5 bits (160), Expect = 5e-12 Identities = 34/56 (60%), Positives = 35/56 (62%) Frame = +2 Query: 170 RKKVVHVTAATDDXXXXXXXXXXXVNTIPGIEEVNMIKEDGTVIHFNNPKAQASLA 337 +KKVVH TA DD VN I GIEEVNM GTVIHFNNPK QASLA Sbjct: 29 KKKVVHRTATADDKKLQFSLKKLGVNNISGIEEVNMFTNQGTVIHFNNPKVQASLA 84 Score = 46.8 bits (106), Expect = 2e-05 Identities = 21/31 (67%), Positives = 26/31 (83%) Frame = +1 Query: 85 LKNSRMNSEKLKKLQSQVRIGGKGTPRRKEE 177 +K + MN EKL KLQ+QVRIGGKGT RRK++ Sbjct: 1 MKETIMNQEKLAKLQAQVRIGGKGTARRKKK 31 >AB062126-1|BAB93458.1| 162|Homo sapiens transcription factor BTF 3 protein. Length = 162 Score = 68.5 bits (160), Expect = 5e-12 Identities = 34/56 (60%), Positives = 35/56 (62%) Frame = +2 Query: 170 RKKVVHVTAATDDXXXXXXXXXXXVNTIPGIEEVNMIKEDGTVIHFNNPKAQASLA 337 +KKVVH TA DD VN I GIEEVNM GTVIHFNNPK QASLA Sbjct: 29 KKKVVHRTATADDKKLQFSLKKLGVNNISGIEEVNMFTNQGTVIHFNNPKVQASLA 84 Score = 46.8 bits (106), Expect = 2e-05 Identities = 21/31 (67%), Positives = 26/31 (83%) Frame = +1 Query: 85 LKNSRMNSEKLKKLQSQVRIGGKGTPRRKEE 177 +K + MN EKL KLQ+QVRIGGKGT RRK++ Sbjct: 1 MKETIMNQEKLAKLQAQVRIGGKGTARRKKK 31 >M90356-1|AAA58401.1| 214|Homo sapiens BTF3 homologue protein. Length = 214 Score = 65.7 bits (153), Expect = 3e-11 Identities = 35/61 (57%), Positives = 37/61 (60%) Frame = +2 Query: 155 AHRDARKKVVHVTAATDDXXXXXXXXXXXVNTIPGIEEVNMIKEDGTVIHFNNPKAQASL 334 AHR +KKV H TA DD VN I GIE+VNM GTVIHFNNPK QASL Sbjct: 56 AHR--KKKVFHRTATADDKKLQFSLKKLQVNNISGIEKVNMFTNQGTVIHFNNPKFQASL 113 Query: 335 A 337 A Sbjct: 114 A 114 Score = 36.7 bits (81), Expect = 0.018 Identities = 17/32 (53%), Positives = 23/32 (71%) Frame = +1 Query: 82 TLKNSRMNSEKLKKLQSQVRIGGKGTPRRKEE 177 T +++ KL KLQ+QVRIGGKGT RK++ Sbjct: 30 TCRSTDHEPGKLAKLQAQVRIGGKGTAHRKKK 61 >M90354-1|AAA58400.1| 111|Homo sapiens BTF3 homologue protein. Length = 111 Score = 65.7 bits (153), Expect = 3e-11 Identities = 34/56 (60%), Positives = 36/56 (64%) Frame = +2 Query: 170 RKKVVHVTAATDDXXXXXXXXXXXVNTIPGIEEVNMIKEDGTVIHFNNPKAQASLA 337 RKKVVH TA +D VN IPGIEEVNM GTVIHFNNP+ QASLA Sbjct: 27 RKKVVHTTA--EDKKFQFSLKKLGVNNIPGIEEVNMFTHQGTVIHFNNPEVQASLA 80 >M90357-1|AAA58398.1| 158|Homo sapiens basic transcription factor 3a protein. Length = 158 Score = 41.5 bits (93), Expect = 6e-04 Identities = 18/24 (75%), Positives = 19/24 (79%) Frame = +2 Query: 266 EVNMIKEDGTVIHFNNPKAQASLA 337 +VNM GTVIHFNNPK QASLA Sbjct: 67 KVNMFTNQGTVIHFNNPKVQASLA 90 Score = 35.9 bits (79), Expect = 0.031 Identities = 16/23 (69%), Positives = 19/23 (82%) Frame = +1 Query: 85 LKNSRMNSEKLKKLQSQVRIGGK 153 +K + MN EKL KLQ+QVRIGGK Sbjct: 45 MKETIMNQEKLAKLQAQVRIGGK 67 >M90355-1|AAB04035.1| 67|Homo sapiens BTF3 homologue protein. Length = 67 Score = 31.9 bits (69), Expect = 0.50 Identities = 19/44 (43%), Positives = 22/44 (50%) Frame = +2 Query: 170 RKKVVHVTAATDDXXXXXXXXXXXVNTIPGIEEVNMIKEDGTVI 301 RKKVVH TA +D ++ GIEEVNM TVI Sbjct: 26 RKKVVHRTATANDKKRQFSLKKLEIS---GIEEVNMFTNQATVI 66 Score = 30.3 bits (65), Expect = 1.5 Identities = 16/30 (53%), Positives = 21/30 (70%) Frame = +1 Query: 85 LKNSRMNSEKLKKLQSQVRIGGKGTPRRKE 174 +K + MN EKL KLQ++V IG GT RK+ Sbjct: 1 MKETIMNQEKLAKLQAKVPIG--GTAHRKK 28 >AB023201-1|BAA76828.1| 728|Homo sapiens KIAA0984 protein protein. Length = 728 Score = 29.9 bits (64), Expect = 2.0 Identities = 11/35 (31%), Positives = 20/35 (57%) Frame = +1 Query: 178 GCSRYCGHR*QKTAVIAQKVVSEHNSWHRRGKYDQ 282 GCS YCG ++ V+ ++V+ + W++ Y Q Sbjct: 109 GCSSYCGQEAEQDRVVLKRVLLAYARWNKTVGYCQ 143 >BC062736-1|AAH62736.1| 102|Homo sapiens LOC503543 protein protein. Length = 102 Score = 29.5 bits (63), Expect = 2.7 Identities = 13/23 (56%), Positives = 16/23 (69%) Frame = +2 Query: 269 VNMIKEDGTVIHFNNPKAQASLA 337 +N K T+IHFNNP+ QA LA Sbjct: 1 MNQEKLQRTMIHFNNPEVQAFLA 23 Database: human Posted date: Oct 23, 2007 1:18 PM Number of letters in database: 76,859,062 Number of sequences in database: 237,096 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 44,029,937 Number of Sequences: 237096 Number of extensions: 802472 Number of successful extensions: 5154 Number of sequences better than 10.0: 18 Number of HSP's better than 10.0 without gapping: 5129 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 5153 length of database: 76,859,062 effective HSP length: 80 effective length of database: 57,891,382 effective search space used: 1794632842 frameshift window, decay const: 40, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 41 (21.7 bits)
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