Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= brS-1184
(691 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPAC3A12.14 |cam1||calmodulin Cam1 |Schizosaccharomyces pombe|ch... 99 5e-22
SPCC830.06 |||calcineurin regulatory subunit |Schizosaccharomyce... 59 7e-10
SPCC1682.04 |cdc31||centrin|Schizosaccharomyces pombe|chr 3|||Ma... 57 3e-09
SPAC29A4.05 |cam2||myosin I light chain Cam2|Schizosaccharomyces... 54 3e-08
SPAP8A3.08 |cdc4||myosin II light chain|Schizosaccharomyces pomb... 41 2e-04
SPAC18B11.04 |ncs1||related to neuronal calcium sensor Ncs1|Schi... 33 0.039
SPAC22F8.11 |plc1||phosphoinositide phospholipase C Plc1|Schizos... 31 0.16
SPAC56E4.04c |cut6||acetyl-CoA carboxylase|Schizosaccharomyces p... 29 0.48
SPAC926.03 |rlc1||myosin II regulatory light chain |Schizosaccha... 27 2.6
SPAC1687.14c |||EF hand family protein, unknown role|Schizosacch... 26 5.9
SPAPB1E7.04c |||chitinase |Schizosaccharomyces pombe|chr 1|||Manual 26 5.9
SPBC1778.06c |fim1||fimbrin|Schizosaccharomyces pombe|chr 2|||Ma... 25 7.8
>SPAC3A12.14 |cam1||calmodulin Cam1 |Schizosaccharomyces pombe|chr
1|||Manual
Length = 150
Score = 99.1 bits (236), Expect = 5e-22
Identities = 48/143 (33%), Positives = 84/143 (58%)
Frame = +3
Query: 105 IEVLRKAFDGFDHNRSGSIPCDFVADILRMMGQPFNKKILEELIEEVDADKSGRLEFPEF 284
I R+AF FD ++ G+I + + ++R +GQ L+++I EVDAD +G ++F EF
Sbjct: 11 IAEFREAFSLFDRDQDGNITSNELGVVMRSLGQSPTAAELQDMINEVDADGNGTIDFTEF 70
Query: 285 VTLAAKFIVEEDAEAMQKELREAFRLYDKEGNGYIPTSSLREIXXXXXXXXXXXXXXXXI 464
+T+ A+ + + D E +E+REAF+++DK+GNGYI L + I
Sbjct: 71 LTMMARKMKDTDNE---EEVREAFKVFDKDGNGYITVEELTHVLTSLGERLSQEEVADMI 127
Query: 465 QEIDTDGSGTVDFDEFMEMMTGE 533
+E DTDG G ++++EF +++ +
Sbjct: 128 READTDGDGVINYEEFSRVISSK 150
>SPCC830.06 |||calcineurin regulatory subunit |Schizosaccharomyces
pombe|chr 3|||Manual
Length = 174
Score = 58.8 bits (136), Expect = 7e-10
Identities = 42/147 (28%), Positives = 67/147 (45%), Gaps = 5/147 (3%)
Frame = +3
Query: 105 IEVLRKAFDGFDHNRSGSIPCDFVADILRMMGQPFNKKILEELIEEVDADKSGRLEFPEF 284
IE +RK F D N+SGSI + I + P + L VD D G ++F EF
Sbjct: 23 IERIRKRFIKIDANQSGSIDRNEFLSIPSVASNP----LASRLFSVVDEDGGGDVDFQEF 78
Query: 285 VTLAAKFIVEEDAEAMQKELREAFRLYDKEGNGYIPTSSL-----REIXXXXXXXXXXXX 449
+ + F V + E ++L+ AF++YD + +GYI L +
Sbjct: 79 INSLSVFSVHGNKE---EKLKFAFKIYDIDRDGYISNGELYLVLKMMVGTNLREDQLQQI 135
Query: 450 XXXXIQEIDTDGSGTVDFDEFMEMMTG 530
I E+D D G + F+EF ++++G
Sbjct: 136 VDKTIMEVDKDRDGKISFEEFKDIVSG 162
>SPCC1682.04 |cdc31||centrin|Schizosaccharomyces pombe|chr
3|||Manual
Length = 176
Score = 56.8 bits (131), Expect = 3e-09
Identities = 35/140 (25%), Positives = 64/140 (45%)
Frame = +3
Query: 114 LRKAFDGFDHNRSGSIPCDFVADILRMMGQPFNKKILEELIEEVDADKSGRLEFPEFVTL 293
+ +AF FD ++ +I + +R +G K + +++ + D G L+ +FV +
Sbjct: 39 INEAFKLFDSDKDNAIDYHELRAAMRALGFNAEKSEVLKILRDFDKTGKGYLQMEDFVRV 98
Query: 294 AAKFIVEEDAEAMQKELREAFRLYDKEGNGYIPTSSLREIXXXXXXXXXXXXXXXXIQEI 473
+ IVE D +E++ AF L+D + G I +LR + I+E
Sbjct: 99 MTEKIVERDP---LEEIKRAFELFDDDETGKISLRNLRRVAKELNENIDDQELEAMIEEF 155
Query: 474 DTDGSGTVDFDEFMEMMTGE 533
D D G ++ EF+ +M E
Sbjct: 156 DLDQDGEINEQEFIAIMMDE 175
Score = 40.3 bits (90), Expect = 3e-04
Identities = 17/63 (26%), Positives = 36/63 (57%)
Frame = +3
Query: 105 IEVLRKAFDGFDHNRSGSIPCDFVADILRMMGQPFNKKILEELIEEVDADKSGRLEFPEF 284
+E +++AF+ FD + +G I + + + + + + + LE +IEE D D+ G + EF
Sbjct: 109 LEEIKRAFELFDDDETGKISLRNLRRVAKELNENIDDQELEAMIEEFDLDQDGEINEQEF 168
Query: 285 VTL 293
+ +
Sbjct: 169 IAI 171
Score = 33.9 bits (74), Expect = 0.022
Identities = 16/71 (22%), Positives = 32/71 (45%)
Frame = +3
Query: 315 EDAEAMQKELREAFRLYDKEGNGYIPTSSLREIXXXXXXXXXXXXXXXXIQEIDTDGSGT 494
E E ++++ EAF+L+D + + I LR +++ D G G
Sbjct: 30 EITEEQRQDINEAFKLFDSDKDNAIDYHELRAAMRALGFNAEKSEVLKILRDFDKTGKGY 89
Query: 495 VDFDEFMEMMT 527
+ ++F+ +MT
Sbjct: 90 LQMEDFVRVMT 100
>SPAC29A4.05 |cam2||myosin I light chain Cam2|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 143
Score = 53.6 bits (123), Expect = 3e-08
Identities = 33/135 (24%), Positives = 66/135 (48%)
Frame = +3
Query: 114 LRKAFDGFDHNRSGSIPCDFVADILRMMGQPFNKKILEELIEEVDADKSGRLEFPEFVTL 293
+++AF +D ++ G IP V +LR +G L +L E+ ++ +F++
Sbjct: 11 MKEAFVLYDIDKDGLIPTSHVGSVLRSLGINVTDAELAKLSNEL----GDAIDEKKFMSF 66
Query: 294 AAKFIVEEDAEAMQKELREAFRLYDKEGNGYIPTSSLREIXXXXXXXXXXXXXXXXIQEI 473
+ + E ++E +E +AFR++DK+ +GYI T+ + +QE
Sbjct: 67 VSNKLRETESE---EEYIKAFRVFDKDNSGYIETAKFADYMKTLGEKLSDNEVQLMVQEA 123
Query: 474 DTDGSGTVDFDEFME 518
D SG+ D+ +F++
Sbjct: 124 DPTNSGSFDYYDFVQ 138
Score = 29.1 bits (62), Expect = 0.63
Identities = 12/25 (48%), Positives = 18/25 (72%)
Frame = +3
Query: 339 ELREAFRLYDKEGNGYIPTSSLREI 413
E++EAF LYD + +G IPTS + +
Sbjct: 10 EMKEAFVLYDIDKDGLIPTSHVGSV 34
>SPAP8A3.08 |cdc4||myosin II light chain|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 141
Score = 40.7 bits (91), Expect = 2e-04
Identities = 30/136 (22%), Positives = 62/136 (45%)
Frame = +3
Query: 117 RKAFDGFDHNRSGSIPCDFVADILRMMGQPFNKKILEELIEEVDADKSGRLEFPEFVTLA 296
++AF FD + +G IP + D+LR GQ N + E I E+++ ++ +F+ +
Sbjct: 9 KQAFSLFDRHGTGRIPKTSIGDLLRACGQ--NPTLAE--ITEIESTLPAEVDMEQFLQVL 64
Query: 297 AKFIVEEDAEAMQKELREAFRLYDKEGNGYIPTSSLREIXXXXXXXXXXXXXXXXIQEID 476
+ D +E + F+++DK+ G I LR + ++ +
Sbjct: 65 NR-PNGFDMPGDPEEFVKGFQVFDKDATGMIGVGELRYVLTSLGEKLSNEEMDELLKGVP 123
Query: 477 TDGSGTVDFDEFMEMM 524
G V++ +F++M+
Sbjct: 124 VK-DGMVNYHDFVQMI 138
>SPAC18B11.04 |ncs1||related to neuronal calcium sensor
Ncs1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 190
Score = 33.1 bits (72), Expect = 0.039
Identities = 21/63 (33%), Positives = 32/63 (50%)
Frame = +3
Query: 225 EELIEEVDADKSGRLEFPEFVTLAAKFIVEEDAEAMQKELREAFRLYDKEGNGYIPTSSL 404
E + DADK+G ++F EF+ + V E + +L AF+LYD + NG I +
Sbjct: 66 EYVFNVFDADKNGYIDFKEFICALS---VTSRGE-LNDKLIWAFQLYDLDNNGLISYDEM 121
Query: 405 REI 413
I
Sbjct: 122 LRI 124
>SPAC22F8.11 |plc1||phosphoinositide phospholipase C
Plc1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 899
Score = 31.1 bits (67), Expect = 0.16
Identities = 15/53 (28%), Positives = 28/53 (52%)
Frame = +3
Query: 126 FDGFDHNRSGSIPCDFVADILRMMGQPFNKKILEELIEEVDADKSGRLEFPEF 284
++ + +S + V + +M+ + + LEE ++ DAD SG+L F EF
Sbjct: 303 WEKLEKEQSAQLDLGDVHRMCQMLHLNASMEFLEETFQKADADHSGKLSFEEF 355
>SPAC56E4.04c |cut6||acetyl-CoA carboxylase|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 2280
Score = 29.5 bits (63), Expect = 0.48
Identities = 19/65 (29%), Positives = 31/65 (47%), Gaps = 1/65 (1%)
Frame = -3
Query: 512 ELVEVDGAASVSV-DLLDEAIEFIVSQLLVQFPEDLAQARRGNVTVAFLVVQSERFPEFF 336
EL V A S DL D AI ++Q+L F +DL + VT+ + +P ++
Sbjct: 1246 ELTNVVNVALTSTGDLDDSAIVSKLNQILSDFRDDLLEHNVRRVTIVGGRINKSAYPSYY 1305
Query: 335 LHGLS 321
+ +S
Sbjct: 1306 TYRVS 1310
>SPAC926.03 |rlc1||myosin II regulatory light chain
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 184
Score = 27.1 bits (57), Expect = 2.6
Identities = 11/18 (61%), Positives = 15/18 (83%)
Frame = +3
Query: 336 KELREAFRLYDKEGNGYI 389
+EL+EAF L DK+G+G I
Sbjct: 48 QELKEAFALLDKDGDGNI 65
>SPAC1687.14c |||EF hand family protein, unknown
role|Schizosaccharomyces pombe|chr 1|||Manual
Length = 76
Score = 25.8 bits (54), Expect = 5.9
Identities = 12/26 (46%), Positives = 14/26 (53%)
Frame = +3
Query: 330 MQKELREAFRLYDKEGNGYIPTSSLR 407
M +E EAF L+D GYI LR
Sbjct: 10 MDEEAEEAFDLFDVTHKGYIDFEDLR 35
>SPAPB1E7.04c |||chitinase |Schizosaccharomyces pombe|chr 1|||Manual
Length = 1236
Score = 25.8 bits (54), Expect = 5.9
Identities = 15/36 (41%), Positives = 21/36 (58%)
Frame = +1
Query: 406 ARSSGNWTSS*LTMNSMASSKRSTLTEAAPSTSTSS 513
A ++G+ TSS T + SS S T +A +STSS
Sbjct: 968 ASATGSSTSSIATASVSGSSTSSVATASATDSSTSS 1003
Score = 25.4 bits (53), Expect = 7.8
Identities = 16/38 (42%), Positives = 21/38 (55%)
Frame = +1
Query: 400 ACARSSGNWTSS*LTMNSMASSKRSTLTEAAPSTSTSS 513
A A +G+ TSS T + SS S T +A +STSS
Sbjct: 1005 AAASVTGSSTSSVATASVTDSSTSSVATASATDSSTSS 1042
>SPBC1778.06c |fim1||fimbrin|Schizosaccharomyces pombe|chr
2|||Manual
Length = 614
Score = 25.4 bits (53), Expect = 7.8
Identities = 11/22 (50%), Positives = 15/22 (68%)
Frame = +3
Query: 222 LEELIEEVDADKSGRLEFPEFV 287
+ E I EV+ D SGR+E +FV
Sbjct: 56 VREAIREVNVDSSGRVEPEDFV 77
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,307,542
Number of Sequences: 5004
Number of extensions: 39551
Number of successful extensions: 157
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 131
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 147
length of database: 2,362,478
effective HSP length: 70
effective length of database: 2,012,198
effective search space used: 319939482
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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