Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= brS-1182
         (525 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_P25360 Cluster: Inorganic phosphate transporter PHO87; ...    34   2.3  
UniRef50_Q84K51 Cluster: Putative uncharacterized protein At1g77...    33   3.0  
UniRef50_Q25733 Cluster: PfEMP1 variant 1 of strain MC; n=14; Pl...    33   4.0  
UniRef50_A6QXS4 Cluster: Predicted protein; n=10; Pezizomycotina...    32   7.0  
UniRef50_Q1I108 Cluster: Rep; n=1; Pasteurella phage F108|Rep: R...    32   9.3  
UniRef50_Q4YMT0 Cluster: Putative uncharacterized protein; n=3; ...    32   9.3  
UniRef50_Q4DZ27 Cluster: Putative uncharacterized protein; n=3; ...    32   9.3  

>UniRef50_P25360 Cluster: Inorganic phosphate transporter PHO87;
           n=13; Saccharomycetales|Rep: Inorganic phosphate
           transporter PHO87 - Saccharomyces cerevisiae (Baker's
           yeast)
          Length = 923

 Score = 33.9 bits (74), Expect = 2.3
 Identities = 16/37 (43%), Positives = 23/37 (62%), Gaps = 1/37 (2%)
 Frame = -3

Query: 421 RQFLSNHNMGFSKVTKKSIKKM-FNTEHSYIASSKYF 314
           + F+  + MGFSK+TKKS K +  NT    I S ++F
Sbjct: 303 KSFIELNRMGFSKITKKSDKVLHMNTRQELIESEEFF 339


>UniRef50_Q84K51 Cluster: Putative uncharacterized protein
           At1g77770; n=2; Arabidopsis thaliana|Rep: Putative
           uncharacterized protein At1g77770 - Arabidopsis thaliana
           (Mouse-ear cress)
          Length = 265

 Score = 33.5 bits (73), Expect = 3.0
 Identities = 23/69 (33%), Positives = 34/69 (49%)
 Frame = -3

Query: 331 ASSKYFAKYLPKYRP*LKSKGNQINNYCFSMFYLCRTHITGLNVLRDKRNTINRVQAVRV 152
           A+S  FA  L +YR   KS GN+ +     +  LCR  + G  V++D R   N  +  R 
Sbjct: 59  ATSSRFANCLDQYR---KSYGNENSGQPELLCPLCRGQVKGWTVVKDARMHFNSKR--RT 113

Query: 151 CCG*NCRWI 125
           C   NC ++
Sbjct: 114 CMQDNCSFL 122


>UniRef50_Q25733 Cluster: PfEMP1 variant 1 of strain MC; n=14;
            Plasmodium falciparum|Rep: PfEMP1 variant 1 of strain MC
            - Plasmodium falciparum
          Length = 2924

 Score = 33.1 bits (72), Expect = 4.0
 Identities = 18/56 (32%), Positives = 33/56 (58%)
 Frame = -3

Query: 421  RQFLSNHNMGFSKVTKKSIKKMFNTEHSYIASSKYFAKYLPKYRP*LKSKGNQINN 254
            ++ + N  +GF K  K+   +++N + S I S++YF K+L K    LK K  ++N+
Sbjct: 1990 KKLIHNWKLGFDKY-KEIYNEIYNNKDSKINSNEYFKKFLEK----LKDKCKELNS 2040


>UniRef50_A6QXS4 Cluster: Predicted protein; n=10;
           Pezizomycotina|Rep: Predicted protein - Ajellomyces
           capsulatus NAm1
          Length = 1170

 Score = 32.3 bits (70), Expect = 7.0
 Identities = 13/23 (56%), Positives = 16/23 (69%)
 Frame = -1

Query: 351 TPNTAISQVPSILPNTSPNIDPN 283
           TPNT  +  P+I PN  PNI+PN
Sbjct: 870 TPNTDPNITPNITPNIGPNINPN 892


>UniRef50_Q1I108 Cluster: Rep; n=1; Pasteurella phage F108|Rep: Rep
           - Pasteurella phage F108
          Length = 769

 Score = 31.9 bits (69), Expect = 9.3
 Identities = 15/43 (34%), Positives = 27/43 (62%)
 Frame = -3

Query: 400 NMGFSKVTKKSIKKMFNTEHSYIASSKYFAKYLPKYRP*LKSK 272
           N+   +V ++ +KK FN+ H  ++    F+K LPK+R  L+S+
Sbjct: 102 NLFIREVLEERLKKAFNSYHINVSFLLAFSKNLPKWRADLESE 144


>UniRef50_Q4YMT0 Cluster: Putative uncharacterized protein; n=3;
           Plasmodium (Vinckeia)|Rep: Putative uncharacterized
           protein - Plasmodium berghei
          Length = 407

 Score = 31.9 bits (69), Expect = 9.3
 Identities = 22/69 (31%), Positives = 31/69 (44%)
 Frame = -3

Query: 364 KKMFNTEHSYIASSKYFAKYLPKYRP*LKSKGNQINNYCFSMFYLCRTHITGLNVLRDKR 185
           K  FN E   I   KY  + +  Y P     GN  NNYC  + Y  + H  G+N  ++  
Sbjct: 12  KGYFNNEG--IRLCKYCERTIT-YTPSYNRNGNIKNNYCSILGYK-KNHYHGINSEKNLN 67

Query: 184 NTINRVQAV 158
           N +N V  +
Sbjct: 68  NILNEVDKI 76


>UniRef50_Q4DZ27 Cluster: Putative uncharacterized protein; n=3;
           Trypanosoma cruzi|Rep: Putative uncharacterized protein
           - Trypanosoma cruzi
          Length = 3920

 Score = 31.9 bits (69), Expect = 9.3
 Identities = 15/33 (45%), Positives = 25/33 (75%)
 Frame = +1

Query: 160 LLAPYLLCFSCLVIHLSL*CVCDRDKTLKNNSC 258
           LL P +L  +C+  +++L  VC++DKTLKN++C
Sbjct: 681 LLVP-VLHSACVDANVALDRVCNKDKTLKNDTC 712


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 542,764,963
Number of Sequences: 1657284
Number of extensions: 11179664
Number of successful extensions: 25527
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 24177
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 25487
length of database: 575,637,011
effective HSP length: 95
effective length of database: 418,195,031
effective search space used: 33037407449
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)