Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= brS-1182
         (525 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY695257-1|AAW21974.1|  224|Tribolium castaneum intermediate neu...    23   1.6  
EF125547-1|ABL73931.1|  255|Tribolium castaneum obstractor D pro...    23   2.2  
AM292352-1|CAL23164.1|  250|Tribolium castaneum gustatory recept...    22   3.8  
AM292381-1|CAL23193.2|  364|Tribolium castaneum gustatory recept...    21   5.0  
AM292348-1|CAL23160.2|  346|Tribolium castaneum gustatory recept...    21   5.0  
U81040-1|AAB39356.1|  283|Tribolium castaneum TC Deformed protein.     21   6.7  
U81038-1|AAB39355.1|  412|Tribolium castaneum transcription fact...    21   6.7  
U04271-2|AAA03709.1|  490|Tribolium castaneum alpha-amylase II p...    21   6.7  
AF321227-3|AAK16423.1|  412|Tribolium castaneum Dfd protein.           21   6.7  
AY884064-1|AAX84205.1|  683|Tribolium castaneum pro-phenol oxida...    21   8.8  
AM292370-1|CAL23182.1|  418|Tribolium castaneum gustatory recept...    21   8.8  
AM292335-1|CAL23147.2|  374|Tribolium castaneum gustatory recept...    21   8.8  
AJ621748-1|CAF21851.1|  228|Tribolium castaneum zinc finger tran...    21   8.8  

>AY695257-1|AAW21974.1|  224|Tribolium castaneum intermediate
           neuroblasts defectiveprotein protein.
          Length = 224

 Score = 23.0 bits (47), Expect = 1.6
 Identities = 11/30 (36%), Positives = 16/30 (53%)
 Frame = -3

Query: 328 SSKYFAKYLPKYRP*LKSKGNQINNYCFSM 239
           +++Y    L   RP L    N IN+Y FS+
Sbjct: 21  NARYLPPSLSDTRPMLPYPQNYINSYLFSL 50


>EF125547-1|ABL73931.1|  255|Tribolium castaneum obstractor D
           protein.
          Length = 255

 Score = 22.6 bits (46), Expect = 2.2
 Identities = 9/24 (37%), Positives = 12/24 (50%)
 Frame = -1

Query: 360 KCLTPNTAISQVPSILPNTSPNID 289
           +C+ P T    VPS +P   P  D
Sbjct: 198 RCVVPPTEDCDVPSTIPPPPPEED 221


>AM292352-1|CAL23164.1|  250|Tribolium castaneum gustatory receptor
           candidate 31 protein.
          Length = 250

 Score = 21.8 bits (44), Expect = 3.8
 Identities = 10/36 (27%), Positives = 17/36 (47%)
 Frame = -2

Query: 212 RLKCITRQEKHNK*GASSPCVLWLKLSLDHFEMYML 105
           RLK +  + +  K        LW +L  +H+ +Y L
Sbjct: 119 RLKQLNAKVEMLKNARVKNTALWKQLRYEHYRLYQL 154



 Score = 21.0 bits (42), Expect = 6.7
 Identities = 8/20 (40%), Positives = 13/20 (65%)
 Frame = +1

Query: 166 APYLLCFSCLVIHLSL*CVC 225
           A YL+ F+ L++ L   C+C
Sbjct: 195 AYYLISFALLIMRLISVCLC 214


>AM292381-1|CAL23193.2|  364|Tribolium castaneum gustatory receptor
           candidate 60 protein.
          Length = 364

 Score = 21.4 bits (43), Expect = 5.0
 Identities = 8/21 (38%), Positives = 13/21 (61%)
 Frame = +2

Query: 296 FGEVFGKILGTCDIAVFGVKH 358
           F  +F K+LG   + + GVK+
Sbjct: 122 FFTLFNKLLGQYPVGIVGVKN 142


>AM292348-1|CAL23160.2|  346|Tribolium castaneum gustatory receptor
           candidate 27 protein.
          Length = 346

 Score = 21.4 bits (43), Expect = 5.0
 Identities = 9/20 (45%), Positives = 11/20 (55%)
 Frame = -1

Query: 141 KIVVGSFRDVYAHLGLFFEC 82
           KIV   FR+V     +F EC
Sbjct: 212 KIVTNGFRNVAESRKIFIEC 231


>U81040-1|AAB39356.1|  283|Tribolium castaneum TC Deformed protein.
          Length = 283

 Score = 21.0 bits (42), Expect = 6.7
 Identities = 9/28 (32%), Positives = 15/28 (53%)
 Frame = -1

Query: 348 PNTAISQVPSILPNTSPNIDPN*KAKGT 265
           P T+ S +   L + +PN+ PN   K +
Sbjct: 121 PVTSSSNILQNLADITPNVTPNCDVKSS 148


>U81038-1|AAB39355.1|  412|Tribolium castaneum transcription factor
           Deformed protein.
          Length = 412

 Score = 21.0 bits (42), Expect = 6.7
 Identities = 9/28 (32%), Positives = 15/28 (53%)
 Frame = -1

Query: 348 PNTAISQVPSILPNTSPNIDPN*KAKGT 265
           P T+ S +   L + +PN+ PN   K +
Sbjct: 121 PVTSSSNILQNLADITPNVTPNCDVKSS 148


>U04271-2|AAA03709.1|  490|Tribolium castaneum alpha-amylase II
           protein.
          Length = 490

 Score = 21.0 bits (42), Expect = 6.7
 Identities = 8/20 (40%), Positives = 13/20 (65%)
 Frame = -1

Query: 492 PISYIVNDATNRETRVQNSI 433
           P+SYI+N  +  ET + + I
Sbjct: 81  PVSYILNTRSGDETALADMI 100


>AF321227-3|AAK16423.1|  412|Tribolium castaneum Dfd protein.
          Length = 412

 Score = 21.0 bits (42), Expect = 6.7
 Identities = 9/28 (32%), Positives = 15/28 (53%)
 Frame = -1

Query: 348 PNTAISQVPSILPNTSPNIDPN*KAKGT 265
           P T+ S +   L + +PN+ PN   K +
Sbjct: 121 PVTSSSNILQNLADITPNVTPNCDVKSS 148


>AY884064-1|AAX84205.1|  683|Tribolium castaneum pro-phenol oxidase
           subunit 2 protein.
          Length = 683

 Score = 20.6 bits (41), Expect = 8.8
 Identities = 10/21 (47%), Positives = 12/21 (57%)
 Frame = +3

Query: 138 F*PQHTRTACTLFIVFLLSRN 200
           F P+H R A  L  +FL  RN
Sbjct: 83  FIPKHRRIAGRLIDIFLGMRN 103


>AM292370-1|CAL23182.1|  418|Tribolium castaneum gustatory receptor
           candidate 49 protein.
          Length = 418

 Score = 20.6 bits (41), Expect = 8.8
 Identities = 6/9 (66%), Positives = 8/9 (88%)
 Frame = -3

Query: 253 YCFSMFYLC 227
           Y F++FYLC
Sbjct: 317 YTFNLFYLC 325


>AM292335-1|CAL23147.2|  374|Tribolium castaneum gustatory receptor
           candidate 14 protein.
          Length = 374

 Score = 20.6 bits (41), Expect = 8.8
 Identities = 6/9 (66%), Positives = 8/9 (88%)
 Frame = -3

Query: 253 YCFSMFYLC 227
           Y F++FYLC
Sbjct: 273 YTFNLFYLC 281


>AJ621748-1|CAF21851.1|  228|Tribolium castaneum zinc finger
           transcription factor protein.
          Length = 228

 Score = 20.6 bits (41), Expect = 8.8
 Identities = 7/20 (35%), Positives = 13/20 (65%)
 Frame = -1

Query: 342 TAISQVPSILPNTSPNIDPN 283
           +A+   PS+ P + P+I P+
Sbjct: 188 SALVNAPSVSPASLPSISPS 207


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 136,878
Number of Sequences: 336
Number of extensions: 3289
Number of successful extensions: 14
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 13
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 14
length of database: 122,585
effective HSP length: 53
effective length of database: 104,777
effective search space used: 12678017
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)