Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= brS-1182
(525 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BC022465-1|AAH22465.1| 325|Homo sapiens plasticity related gene... 33 0.61
AY337718-1|AAQ73539.1| 325|Homo sapiens plasticity related gene... 33 0.61
AY304515-1|AAP72152.1| 325|Homo sapiens lipid phosphate phospha... 33 0.61
AL359893-2|CAH72991.1| 325|Homo sapiens novel protein (FLJ20300... 33 0.61
AL161631-3|CAI16479.1| 325|Homo sapiens novel protein (FLJ20300... 33 0.61
AK000307-1|BAA91072.1| 325|Homo sapiens protein ( Homo sapiens ... 33 0.61
D83597-1|BAA12019.1| 661|Homo sapiens RP105 protein. 31 3.3
BC109070-1|AAI09071.1| 661|Homo sapiens CD180 molecule protein. 31 3.3
BC109069-1|AAI09070.1| 661|Homo sapiens CD180 molecule protein. 31 3.3
BC053881-1|AAH53881.1| 613|Homo sapiens immunoglobulin superfam... 29 7.6
BC023649-1|AAH23649.1| 373|Homo sapiens IGSF8 protein protein. 29 7.6
BC004108-1|AAH04108.2| 484|Homo sapiens IGSF8 protein protein. 29 7.6
AY157579-1|AAO13163.1| 613|Homo sapiens keratinocytes associate... 29 7.6
AY044845-1|AAK92220.1| 613|Homo sapiens CD81 partner 3 protein. 29 7.6
AL121987-2|CAI15269.1| 613|Homo sapiens immunoglobulin superfam... 29 7.6
AK055843-1|BAB71027.1| 372|Homo sapiens mRNA. protein. 29 7.6
AF407274-1|AAL01052.1| 613|Homo sapiens EWI2 protein. 29 7.6
BC040174-1|AAH40174.1| 302|Homo sapiens PAP2D protein protein. 29 10.0
AY634620-1|AAT64918.1| 316|Homo sapiens PAP2 protein. 29 10.0
AY574039-1|AAS76645.1| 380|Homo sapiens PAP2 protein protein. 29 10.0
AL590110-1|CAH71749.1| 316|Homo sapiens novel protein protein. 29 10.0
AL445433-1|CAH71558.1| 316|Homo sapiens novel protein protein. 29 10.0
AL161744-1|CAI22993.1| 316|Homo sapiens novel protein protein. 29 10.0
>BC022465-1|AAH22465.1| 325|Homo sapiens plasticity related gene 3
protein.
Length = 325
Score = 33.1 bits (72), Expect = 0.61
Identities = 27/89 (30%), Positives = 48/89 (53%), Gaps = 3/89 (3%)
Frame = -3
Query: 418 QFLSNHNM--GFSKVTKKSIKKMFNTEHSYIASSKYFAKYLPKY-RP*LKSKGNQINNYC 248
QF++N N+ G +V +K+ ++ F ++H+ A S Y A Y Y +K+K +++
Sbjct: 174 QFINNGNICTGDLEVIEKA-RRSFPSKHA--ALSIYSALYATMYITSTIKTKSSRLAKPV 230
Query: 247 FSMFYLCRTHITGLNVLRDKRNTINRVQA 161
+ LC +TGLN + + RN + V A
Sbjct: 231 LCLGTLCTAFLTGLNRVSEYRNHCSDVIA 259
>AY337718-1|AAQ73539.1| 325|Homo sapiens plasticity related gene 3
protein.
Length = 325
Score = 33.1 bits (72), Expect = 0.61
Identities = 27/89 (30%), Positives = 48/89 (53%), Gaps = 3/89 (3%)
Frame = -3
Query: 418 QFLSNHNM--GFSKVTKKSIKKMFNTEHSYIASSKYFAKYLPKY-RP*LKSKGNQINNYC 248
QF++N N+ G +V +K+ ++ F ++H+ A S Y A Y Y +K+K +++
Sbjct: 174 QFINNGNICTGDLEVIEKA-RRSFPSKHA--ALSIYSALYATMYITSTIKTKSSRLAKPV 230
Query: 247 FSMFYLCRTHITGLNVLRDKRNTINRVQA 161
+ LC +TGLN + + RN + V A
Sbjct: 231 LCLGTLCTAFLTGLNRVSEYRNHCSDVIA 259
>AY304515-1|AAP72152.1| 325|Homo sapiens lipid phosphate
phosphatase-related protein type 1 protein.
Length = 325
Score = 33.1 bits (72), Expect = 0.61
Identities = 27/89 (30%), Positives = 48/89 (53%), Gaps = 3/89 (3%)
Frame = -3
Query: 418 QFLSNHNM--GFSKVTKKSIKKMFNTEHSYIASSKYFAKYLPKY-RP*LKSKGNQINNYC 248
QF++N N+ G +V +K+ ++ F ++H+ A S Y A Y Y +K+K +++
Sbjct: 174 QFINNGNICTGDLEVIEKA-RRSFPSKHA--ALSIYSALYATMYITSTIKTKSSRLAKPV 230
Query: 247 FSMFYLCRTHITGLNVLRDKRNTINRVQA 161
+ LC +TGLN + + RN + V A
Sbjct: 231 LCLGTLCTAFLTGLNRVSEYRNHCSDVIA 259
>AL359893-2|CAH72991.1| 325|Homo sapiens novel protein (FLJ20300)
protein.
Length = 325
Score = 33.1 bits (72), Expect = 0.61
Identities = 27/89 (30%), Positives = 48/89 (53%), Gaps = 3/89 (3%)
Frame = -3
Query: 418 QFLSNHNM--GFSKVTKKSIKKMFNTEHSYIASSKYFAKYLPKY-RP*LKSKGNQINNYC 248
QF++N N+ G +V +K+ ++ F ++H+ A S Y A Y Y +K+K +++
Sbjct: 174 QFINNGNICTGDLEVIEKA-RRSFPSKHA--ALSIYSALYATMYITSTIKTKSSRLAKPV 230
Query: 247 FSMFYLCRTHITGLNVLRDKRNTINRVQA 161
+ LC +TGLN + + RN + V A
Sbjct: 231 LCLGTLCTAFLTGLNRVSEYRNHCSDVIA 259
>AL161631-3|CAI16479.1| 325|Homo sapiens novel protein (FLJ20300)
protein.
Length = 325
Score = 33.1 bits (72), Expect = 0.61
Identities = 27/89 (30%), Positives = 48/89 (53%), Gaps = 3/89 (3%)
Frame = -3
Query: 418 QFLSNHNM--GFSKVTKKSIKKMFNTEHSYIASSKYFAKYLPKY-RP*LKSKGNQINNYC 248
QF++N N+ G +V +K+ ++ F ++H+ A S Y A Y Y +K+K +++
Sbjct: 174 QFINNGNICTGDLEVIEKA-RRSFPSKHA--ALSIYSALYATMYITSTIKTKSSRLAKPV 230
Query: 247 FSMFYLCRTHITGLNVLRDKRNTINRVQA 161
+ LC +TGLN + + RN + V A
Sbjct: 231 LCLGTLCTAFLTGLNRVSEYRNHCSDVIA 259
>AK000307-1|BAA91072.1| 325|Homo sapiens protein ( Homo sapiens
cDNA FLJ20300 fis, clone HEP06465. ).
Length = 325
Score = 33.1 bits (72), Expect = 0.61
Identities = 27/89 (30%), Positives = 48/89 (53%), Gaps = 3/89 (3%)
Frame = -3
Query: 418 QFLSNHNM--GFSKVTKKSIKKMFNTEHSYIASSKYFAKYLPKY-RP*LKSKGNQINNYC 248
QF++N N+ G +V +K+ ++ F ++H+ A S Y A Y Y +K+K +++
Sbjct: 174 QFINNGNICTGDLEVIEKA-RRSFPSKHA--ALSIYSALYATMYITSTIKTKSSRLAKPV 230
Query: 247 FSMFYLCRTHITGLNVLRDKRNTINRVQA 161
+ LC +TGLN + + RN + V A
Sbjct: 231 LCLGTLCTAFLTGLNRVSEYRNHCSDVIA 259
>D83597-1|BAA12019.1| 661|Homo sapiens RP105 protein.
Length = 661
Score = 30.7 bits (66), Expect = 3.3
Identities = 12/45 (26%), Positives = 23/45 (51%)
Frame = -1
Query: 435 IIVYNGSSSQIITWDFQKLPKNL*KKCLTPNTAISQVPSILPNTS 301
+++++ I +WD + K K N +S++P LPNT+
Sbjct: 11 VVLFSAGCKVITSWDQMCIEKEANKTYNCENLGLSEIPDTLPNTT 55
>BC109070-1|AAI09071.1| 661|Homo sapiens CD180 molecule protein.
Length = 661
Score = 30.7 bits (66), Expect = 3.3
Identities = 12/45 (26%), Positives = 23/45 (51%)
Frame = -1
Query: 435 IIVYNGSSSQIITWDFQKLPKNL*KKCLTPNTAISQVPSILPNTS 301
+++++ I +WD + K K N +S++P LPNT+
Sbjct: 11 VVLFSAGCKVITSWDQMCIEKEANKTYNCENLGLSEIPDTLPNTT 55
>BC109069-1|AAI09070.1| 661|Homo sapiens CD180 molecule protein.
Length = 661
Score = 30.7 bits (66), Expect = 3.3
Identities = 12/45 (26%), Positives = 23/45 (51%)
Frame = -1
Query: 435 IIVYNGSSSQIITWDFQKLPKNL*KKCLTPNTAISQVPSILPNTS 301
+++++ I +WD + K K N +S++P LPNT+
Sbjct: 11 VVLFSAGCKVITSWDQMCIEKEANKTYNCENLGLSEIPDTLPNTT 55
>BC053881-1|AAH53881.1| 613|Homo sapiens immunoglobulin
superfamily, member 8 protein.
Length = 613
Score = 29.5 bits (63), Expect = 7.6
Identities = 13/35 (37%), Positives = 21/35 (60%)
Frame = +2
Query: 50 VEHCSPSAQIKHSKNSPK*AYTSRNDPTTILTTAH 154
V HC+PSA ++H+ S A ++R+ P T+ H
Sbjct: 541 VYHCAPSAWVQHADYSWYQAGSARSGPVTVYPYMH 575
>BC023649-1|AAH23649.1| 373|Homo sapiens IGSF8 protein protein.
Length = 373
Score = 29.5 bits (63), Expect = 7.6
Identities = 13/35 (37%), Positives = 21/35 (60%)
Frame = +2
Query: 50 VEHCSPSAQIKHSKNSPK*AYTSRNDPTTILTTAH 154
V HC+PSA ++H+ S A ++R+ P T+ H
Sbjct: 301 VYHCAPSAWVQHADYSWYQAGSARSGPVTVYPYMH 335
>BC004108-1|AAH04108.2| 484|Homo sapiens IGSF8 protein protein.
Length = 484
Score = 29.5 bits (63), Expect = 7.6
Identities = 13/35 (37%), Positives = 21/35 (60%)
Frame = +2
Query: 50 VEHCSPSAQIKHSKNSPK*AYTSRNDPTTILTTAH 154
V HC+PSA ++H+ S A ++R+ P T+ H
Sbjct: 412 VYHCAPSAWVQHADYSWYQAGSARSGPVTVYPYMH 446
>AY157579-1|AAO13163.1| 613|Homo sapiens keratinocytes associated
transmembrane protein 4 protein.
Length = 613
Score = 29.5 bits (63), Expect = 7.6
Identities = 13/35 (37%), Positives = 21/35 (60%)
Frame = +2
Query: 50 VEHCSPSAQIKHSKNSPK*AYTSRNDPTTILTTAH 154
V HC+PSA ++H+ S A ++R+ P T+ H
Sbjct: 541 VYHCAPSAWVQHADYSWYQAGSARSGPVTVYPYMH 575
>AY044845-1|AAK92220.1| 613|Homo sapiens CD81 partner 3 protein.
Length = 613
Score = 29.5 bits (63), Expect = 7.6
Identities = 13/35 (37%), Positives = 21/35 (60%)
Frame = +2
Query: 50 VEHCSPSAQIKHSKNSPK*AYTSRNDPTTILTTAH 154
V HC+PSA ++H+ S A ++R+ P T+ H
Sbjct: 541 VYHCAPSAWVQHADYSWYQAGSARSGPVTVYPYMH 575
>AL121987-2|CAI15269.1| 613|Homo sapiens immunoglobulin
superfamily, member 8 protein.
Length = 613
Score = 29.5 bits (63), Expect = 7.6
Identities = 13/35 (37%), Positives = 21/35 (60%)
Frame = +2
Query: 50 VEHCSPSAQIKHSKNSPK*AYTSRNDPTTILTTAH 154
V HC+PSA ++H+ S A ++R+ P T+ H
Sbjct: 541 VYHCAPSAWVQHADYSWYQAGSARSGPVTVYPYMH 575
>AK055843-1|BAB71027.1| 372|Homo sapiens mRNA. protein.
Length = 372
Score = 29.5 bits (63), Expect = 7.6
Identities = 13/35 (37%), Positives = 21/35 (60%)
Frame = +2
Query: 50 VEHCSPSAQIKHSKNSPK*AYTSRNDPTTILTTAH 154
V HC+PSA ++H+ S A ++R+ P T+ H
Sbjct: 300 VYHCAPSAWVQHADYSWYQAGSARSGPVTVYPYMH 334
>AF407274-1|AAL01052.1| 613|Homo sapiens EWI2 protein.
Length = 613
Score = 29.5 bits (63), Expect = 7.6
Identities = 13/35 (37%), Positives = 21/35 (60%)
Frame = +2
Query: 50 VEHCSPSAQIKHSKNSPK*AYTSRNDPTTILTTAH 154
V HC+PSA ++H+ S A ++R+ P T+ H
Sbjct: 541 VYHCAPSAWVQHADYSWYQAGSARSGPVTVYPYMH 575
>BC040174-1|AAH40174.1| 302|Homo sapiens PAP2D protein protein.
Length = 302
Score = 29.1 bits (62), Expect = 10.0
Identities = 17/51 (33%), Positives = 26/51 (50%), Gaps = 1/51 (1%)
Frame = -3
Query: 331 ASSKYFAKYLPKY-RP*LKSKGNQINNYCFSMFYLCRTHITGLNVLRDKRN 182
A S Y A YL Y +K+KG ++ + +C +TGLN + + RN
Sbjct: 183 ALSVYAAMYLTMYITNTIKAKGTRLAKPVLCLGLMCLAFLTGLNRVAEYRN 233
>AY634620-1|AAT64918.1| 316|Homo sapiens PAP2 protein.
Length = 316
Score = 29.1 bits (62), Expect = 10.0
Identities = 17/51 (33%), Positives = 26/51 (50%), Gaps = 1/51 (1%)
Frame = -3
Query: 331 ASSKYFAKYLPKY-RP*LKSKGNQINNYCFSMFYLCRTHITGLNVLRDKRN 182
A S Y A YL Y +K+KG ++ + +C +TGLN + + RN
Sbjct: 197 ALSVYAAMYLTMYITNTIKAKGTRLAKPVLCLGLMCLAFLTGLNRVAEYRN 247
>AY574039-1|AAS76645.1| 380|Homo sapiens PAP2 protein protein.
Length = 380
Score = 29.1 bits (62), Expect = 10.0
Identities = 17/51 (33%), Positives = 26/51 (50%), Gaps = 1/51 (1%)
Frame = -3
Query: 331 ASSKYFAKYLPKY-RP*LKSKGNQINNYCFSMFYLCRTHITGLNVLRDKRN 182
A S Y A YL Y +K+KG ++ + +C +TGLN + + RN
Sbjct: 256 ALSVYAAMYLTMYITNTIKAKGTRLAKPVLCLGLMCLAFLTGLNRVAEYRN 306
>AL590110-1|CAH71749.1| 316|Homo sapiens novel protein protein.
Length = 316
Score = 29.1 bits (62), Expect = 10.0
Identities = 17/51 (33%), Positives = 26/51 (50%), Gaps = 1/51 (1%)
Frame = -3
Query: 331 ASSKYFAKYLPKY-RP*LKSKGNQINNYCFSMFYLCRTHITGLNVLRDKRN 182
A S Y A YL Y +K+KG ++ + +C +TGLN + + RN
Sbjct: 197 ALSVYAAMYLTMYITNTIKAKGTRLAKPVLCLGLMCLAFLTGLNRVAEYRN 247
>AL445433-1|CAH71558.1| 316|Homo sapiens novel protein protein.
Length = 316
Score = 29.1 bits (62), Expect = 10.0
Identities = 17/51 (33%), Positives = 26/51 (50%), Gaps = 1/51 (1%)
Frame = -3
Query: 331 ASSKYFAKYLPKY-RP*LKSKGNQINNYCFSMFYLCRTHITGLNVLRDKRN 182
A S Y A YL Y +K+KG ++ + +C +TGLN + + RN
Sbjct: 197 ALSVYAAMYLTMYITNTIKAKGTRLAKPVLCLGLMCLAFLTGLNRVAEYRN 247
>AL161744-1|CAI22993.1| 316|Homo sapiens novel protein protein.
Length = 316
Score = 29.1 bits (62), Expect = 10.0
Identities = 17/51 (33%), Positives = 26/51 (50%), Gaps = 1/51 (1%)
Frame = -3
Query: 331 ASSKYFAKYLPKY-RP*LKSKGNQINNYCFSMFYLCRTHITGLNVLRDKRN 182
A S Y A YL Y +K+KG ++ + +C +TGLN + + RN
Sbjct: 197 ALSVYAAMYLTMYITNTIKAKGTRLAKPVLCLGLMCLAFLTGLNRVAEYRN 247
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 78,667,183
Number of Sequences: 237096
Number of extensions: 1724323
Number of successful extensions: 3381
Number of sequences better than 10.0: 23
Number of HSP's better than 10.0 without gapping: 3096
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3371
length of database: 76,859,062
effective HSP length: 85
effective length of database: 56,705,902
effective search space used: 5046825278
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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