Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= brS-1181
         (345 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY536865-1|AAT07965.1|  650|Anopheles gambiae tryptophan transpo...    24   1.4  
AJ626713-1|CAF25029.1|  650|Anopheles gambiae tryptophan transpo...    24   1.4  
CR954257-2|CAJ14153.1| 1664|Anopheles gambiae Tubby protein.           23   2.4  
CR954257-9|CAJ14160.1|  573|Anopheles gambiae putative esterase ...    23   4.2  
AY957503-1|AAY41942.1|  596|Anopheles gambiae vasa-like protein ...    23   4.2  
M93689-1|AAA29368.1|  442|Anopheles gambiae protein ( Anopheles ...    22   5.6  
AJ000675-1|CAA04232.1|  600|Anopheles gambiae infection responsi...    22   7.4  

>AY536865-1|AAT07965.1|  650|Anopheles gambiae tryptophan
           transporter protein.
          Length = 650

 Score = 24.2 bits (50), Expect = 1.4
 Identities = 7/11 (63%), Positives = 9/11 (81%)
 Frame = +1

Query: 43  WSRFLEARLWY 75
           W R LEA++WY
Sbjct: 312 WDRILEAKVWY 322


>AJ626713-1|CAF25029.1|  650|Anopheles gambiae tryptophan
           transporter protein.
          Length = 650

 Score = 24.2 bits (50), Expect = 1.4
 Identities = 7/11 (63%), Positives = 9/11 (81%)
 Frame = +1

Query: 43  WSRFLEARLWY 75
           W R LEA++WY
Sbjct: 312 WDRILEAKVWY 322


>CR954257-2|CAJ14153.1| 1664|Anopheles gambiae Tubby protein.
          Length = 1664

 Score = 23.4 bits (48), Expect = 2.4
 Identities = 12/30 (40%), Positives = 15/30 (50%)
 Frame = -1

Query: 96   SRMI*WIIPEPGFQKPTPYLAPAVSKNLYT 7
            S M   I+P P    P+P  APA +K   T
Sbjct: 930  SAMAATIVPNPVQASPSPATAPAPAKTTST 959


>CR954257-9|CAJ14160.1|  573|Anopheles gambiae putative esterase
           protein.
          Length = 573

 Score = 22.6 bits (46), Expect = 4.2
 Identities = 8/21 (38%), Positives = 15/21 (71%)
 Frame = -3

Query: 343 GTSLHSQDAGHLQDHIFRTRP 281
           GT+  SQ +G  ++H +++RP
Sbjct: 386 GTAASSQISGAFREHYWQSRP 406


>AY957503-1|AAY41942.1|  596|Anopheles gambiae vasa-like protein
           protein.
          Length = 596

 Score = 22.6 bits (46), Expect = 4.2
 Identities = 10/26 (38%), Positives = 13/26 (50%)
 Frame = -3

Query: 229 LPRDVGHYVHSISTTDTNTQSTKATS 152
           LP+ +  YVH I  T       +ATS
Sbjct: 500 LPKSIDDYVHRIGRTGRVGNKGRATS 525


>M93689-1|AAA29368.1|  442|Anopheles gambiae protein ( Anopheles
           gambiae T1 retroposon. ).
          Length = 442

 Score = 22.2 bits (45), Expect = 5.6
 Identities = 11/26 (42%), Positives = 14/26 (53%)
 Frame = -3

Query: 208 YVHSISTTDTNTQSTKATSIRCVGVC 131
           +V   ST +  T S  A S+ C GVC
Sbjct: 33  FVMQCSTCNAPTDS--ANSVSCAGVC 56


>AJ000675-1|CAA04232.1|  600|Anopheles gambiae infection responsive
           serine proteaselike protein protein.
          Length = 600

 Score = 21.8 bits (44), Expect = 7.4
 Identities = 9/20 (45%), Positives = 11/20 (55%)
 Frame = -1

Query: 303 ITSFGLVQPVSLPVNLTPIT 244
           I   G  +P  LP+ L PIT
Sbjct: 206 IEGTGASEPTKLPIPLRPIT 225


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 354,946
Number of Sequences: 2352
Number of extensions: 6496
Number of successful extensions: 18
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 18
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 18
length of database: 563,979
effective HSP length: 57
effective length of database: 429,915
effective search space used: 24505155
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)