Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= brS-1181
(345 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
L25599-9|AAN63393.1| 683|Caenorhabditis elegans Aconitase prote... 196 5e-51
L25599-7|AAA28050.2| 777|Caenorhabditis elegans Aconitase prote... 196 5e-51
L25599-8|AAL65788.1| 665|Caenorhabditis elegans Aconitase prote... 99 7e-22
Z66567-1|CAA91491.1| 887|Caenorhabditis elegans Hypothetical pr... 45 2e-05
U80448-5|AAB37819.1| 975|Caenorhabditis elegans Hypothetical pr... 29 1.2
Z78419-7|CAC42290.1| 1601|Caenorhabditis elegans Hypothetical pr... 27 3.6
Z70754-5|CAA94775.1| 304|Caenorhabditis elegans Hypothetical pr... 27 3.6
AF159144-1|AAF80368.1| 1601|Caenorhabditis elegans RRF-1 protein. 27 3.6
CU457741-13|CAM36354.1| 608|Caenorhabditis elegans Hypothetical... 26 6.3
CU457741-11|CAM36352.1| 609|Caenorhabditis elegans Hypothetical... 26 6.3
AF068201-1|AAC70927.1| 609|Caenorhabditis elegans aminopeptidas... 26 6.3
AF068200-1|AAC72891.1| 609|Caenorhabditis elegans aminopeptidas... 26 6.3
AF067608-13|AAK95862.1| 1634|Caenorhabditis elegans Hypothetical... 26 6.3
>L25599-9|AAN63393.1| 683|Caenorhabditis elegans Aconitase protein
2, isoform c protein.
Length = 683
Score = 196 bits (477), Expect = 5e-51
Identities = 91/114 (79%), Positives = 96/114 (84%)
Frame = +2
Query: 2 KEVYKFLETAGAKYGVGFWKPGSGIIHQIILENYAFPGLLMIGTDSHTPNXXXXXXXXXX 181
KEV+ FL TAG+KYGVGFWKPGSGIIHQIILENYAFPGLL+IGTDSHTPN
Sbjct: 51 KEVFNFLATAGSKYGVGFWKPGSGIIHQIILENYAFPGLLLIGTDSHTPNGGGLGGLCIG 110
Query: 182 XXXADAVDVMANIPWELKCPKVIGVKLTGKLTGWTSPKDVILKVAGILTVKGGT 343
ADAVDVMA+IPWELKCPKVIG+KLTGKL GWTS KDVILKVA ILTVKGGT
Sbjct: 111 VGGADAVDVMADIPWELKCPKVIGIKLTGKLNGWTSAKDVILKVADILTVKGGT 164
>L25599-7|AAA28050.2| 777|Caenorhabditis elegans Aconitase protein
2, isoform a protein.
Length = 777
Score = 196 bits (477), Expect = 5e-51
Identities = 91/114 (79%), Positives = 96/114 (84%)
Frame = +2
Query: 2 KEVYKFLETAGAKYGVGFWKPGSGIIHQIILENYAFPGLLMIGTDSHTPNXXXXXXXXXX 181
KEV+ FL TAG+KYGVGFWKPGSGIIHQIILENYAFPGLL+IGTDSHTPN
Sbjct: 145 KEVFNFLATAGSKYGVGFWKPGSGIIHQIILENYAFPGLLLIGTDSHTPNGGGLGGLCIG 204
Query: 182 XXXADAVDVMANIPWELKCPKVIGVKLTGKLTGWTSPKDVILKVAGILTVKGGT 343
ADAVDVMA+IPWELKCPKVIG+KLTGKL GWTS KDVILKVA ILTVKGGT
Sbjct: 205 VGGADAVDVMADIPWELKCPKVIGIKLTGKLNGWTSAKDVILKVADILTVKGGT 258
>L25599-8|AAL65788.1| 665|Caenorhabditis elegans Aconitase protein
2, isoform b protein.
Length = 665
Score = 99.1 bits (236), Expect = 7e-22
Identities = 45/50 (90%), Positives = 47/50 (94%)
Frame = +2
Query: 194 DAVDVMANIPWELKCPKVIGVKLTGKLTGWTSPKDVILKVAGILTVKGGT 343
DAVDVMA+IPWELKCPKVIG+KLTGKL GWTS KDVILKVA ILTVKGGT
Sbjct: 97 DAVDVMADIPWELKCPKVIGIKLTGKLNGWTSAKDVILKVADILTVKGGT 146
>Z66567-1|CAA91491.1| 887|Caenorhabditis elegans Hypothetical
protein ZK455.1 protein.
Length = 887
Score = 44.8 bits (101), Expect = 2e-05
Identities = 31/94 (32%), Positives = 45/94 (47%), Gaps = 10/94 (10%)
Frame = +2
Query: 62 PGSGIIHQIILENYA------FPGLL----MIGTDSHTPNXXXXXXXXXXXXXADAVDVM 211
PGSGI+HQ+ LE A G+L ++GTDSHT +A VM
Sbjct: 170 PGSGIVHQVNLEYLARTVFVGKDGVLYPDSVVGTDSHTTMIDGSGVLGWGVGGIEAEAVM 229
Query: 212 ANIPWELKCPKVIGVKLTGKLTGWTSPKDVILKV 313
P + P+VIG +L G L+ + D++L +
Sbjct: 230 LGQPISMVIPEVIGYELVGTLSDTVTSTDLVLTI 263
>U80448-5|AAB37819.1| 975|Caenorhabditis elegans Hypothetical
protein F59A3.2a protein.
Length = 975
Score = 28.7 bits (61), Expect = 1.2
Identities = 9/34 (26%), Positives = 22/34 (64%)
Frame = +2
Query: 218 IPWELKCPKVIGVKLTGKLTGWTSPKDVILKVAG 319
I W+++ +++ + T + GW S +D+++K+ G
Sbjct: 785 IAWKIRKCQILIFRRTSENHGWQSVRDILIKILG 818
>Z78419-7|CAC42290.1| 1601|Caenorhabditis elegans Hypothetical
protein F26A3.8 protein.
Length = 1601
Score = 27.1 bits (57), Expect = 3.6
Identities = 10/21 (47%), Positives = 14/21 (66%)
Frame = +1
Query: 43 WSRFLEARLWYYPSDHSGELC 105
W FLE +WYY +D+ +LC
Sbjct: 394 WKNFLEIIIWYYRNDN--QLC 412
>Z70754-5|CAA94775.1| 304|Caenorhabditis elegans Hypothetical
protein F58E6.5 protein.
Length = 304
Score = 27.1 bits (57), Expect = 3.6
Identities = 18/63 (28%), Positives = 32/63 (50%), Gaps = 2/63 (3%)
Frame = -3
Query: 328 SQDAGHLQDHIFRTRPAGEFTGQFDA-DN-FRTLQLPRDVGHYVHSISTTDTNTQSTKAT 155
S +AG++ + + TRPAG FTG + DN L+ R G++ ++T K+
Sbjct: 202 SNEAGNMSE-LRTTRPAGAFTGVVASNDNPMSELRTTRPAGNFSGQTASTPGGAVDPKSM 260
Query: 154 SIR 146
++
Sbjct: 261 GLK 263
>AF159144-1|AAF80368.1| 1601|Caenorhabditis elegans RRF-1 protein.
Length = 1601
Score = 27.1 bits (57), Expect = 3.6
Identities = 10/21 (47%), Positives = 14/21 (66%)
Frame = +1
Query: 43 WSRFLEARLWYYPSDHSGELC 105
W FLE +WYY +D+ +LC
Sbjct: 394 WKNFLEIIIWYYRNDN--QLC 412
>CU457741-13|CAM36354.1| 608|Caenorhabditis elegans Hypothetical
protein C42C1.11c protein.
Length = 608
Score = 26.2 bits (55), Expect = 6.3
Identities = 12/24 (50%), Positives = 14/24 (58%)
Frame = -1
Query: 306 KITSFGLVQPVSLPVNLTPITLGH 235
K T F QPVS+P L I +GH
Sbjct: 186 KRTIFSFKQPVSIPSYLLAIVVGH 209
>CU457741-11|CAM36352.1| 609|Caenorhabditis elegans Hypothetical
protein C42C1.11a protein.
Length = 609
Score = 26.2 bits (55), Expect = 6.3
Identities = 12/24 (50%), Positives = 14/24 (58%)
Frame = -1
Query: 306 KITSFGLVQPVSLPVNLTPITLGH 235
K T F QPVS+P L I +GH
Sbjct: 187 KRTIFSFKQPVSIPSYLLAIVVGH 210
>AF068201-1|AAC70927.1| 609|Caenorhabditis elegans aminopeptidase-1
protein.
Length = 609
Score = 26.2 bits (55), Expect = 6.3
Identities = 12/24 (50%), Positives = 14/24 (58%)
Frame = -1
Query: 306 KITSFGLVQPVSLPVNLTPITLGH 235
K T F QPVS+P L I +GH
Sbjct: 187 KRTIFSFKQPVSIPSYLLAIVVGH 210
>AF068200-1|AAC72891.1| 609|Caenorhabditis elegans aminopeptidase-1
protein.
Length = 609
Score = 26.2 bits (55), Expect = 6.3
Identities = 12/24 (50%), Positives = 14/24 (58%)
Frame = -1
Query: 306 KITSFGLVQPVSLPVNLTPITLGH 235
K T F QPVS+P L I +GH
Sbjct: 187 KRTIFSFKQPVSIPSYLLAIVVGH 210
>AF067608-13|AAK95862.1| 1634|Caenorhabditis elegans Hypothetical
protein B0511.12 protein.
Length = 1634
Score = 26.2 bits (55), Expect = 6.3
Identities = 8/22 (36%), Positives = 13/22 (59%)
Frame = -1
Query: 279 PVSLPVNLTPITLGHFSSHGML 214
PV P+ ++P+T H SH +
Sbjct: 1208 PVGYPIYVSPLTTSHIESHSQI 1229
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 7,739,200
Number of Sequences: 27780
Number of extensions: 140128
Number of successful extensions: 375
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 363
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 375
length of database: 12,740,198
effective HSP length: 72
effective length of database: 10,740,038
effective search space used: 451081596
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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