Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= brS-1146
         (618 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY193730-1|AAO62003.1|  441|Anopheles gambiae cytochrome P450 CY...    23   6.0  
AY193729-1|AAO62002.1|  499|Anopheles gambiae cytochrome P450 CY...    23   7.9  

>AY193730-1|AAO62003.1|  441|Anopheles gambiae cytochrome P450
           CYPm3r10 protein.
          Length = 441

 Score = 23.4 bits (48), Expect = 6.0
 Identities = 10/32 (31%), Positives = 20/32 (62%)
 Frame = +3

Query: 453 LKFFITTFRFAPSSSSILNND*YNVNNRITKP 548
           L + +T FRF PS+ +I+  + +++ + I  P
Sbjct: 398 LAYLLTGFRFTPSAKTIVPME-FDIKSFILSP 428


>AY193729-1|AAO62002.1|  499|Anopheles gambiae cytochrome P450
           CYPm3r9 protein.
          Length = 499

 Score = 23.0 bits (47), Expect = 7.9
 Identities = 8/18 (44%), Positives = 13/18 (72%)
 Frame = +3

Query: 453 LKFFITTFRFAPSSSSIL 506
           L + +  FRFAPSS +++
Sbjct: 458 LAYLLDGFRFAPSSKTVI 475


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 425,287
Number of Sequences: 2352
Number of extensions: 5764
Number of successful extensions: 4
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 4
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4
length of database: 563,979
effective HSP length: 61
effective length of database: 420,507
effective search space used: 60553008
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)