Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= brS-1144
         (510 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EF222290-1|ABN79650.1|  378|Tribolium castaneum adipokinetic hor...    23   2.1  
DQ422965-1|ABE02225.1|  378|Tribolium castaneum adipokinetic hor...    23   2.1  
AJ850294-1|CAH64514.1|  539|Tribolium castaneum putative esteras...    23   2.1  
AJ850293-1|CAH64513.1|  539|Tribolium castaneum putative esteras...    23   2.1  
AJ850292-1|CAH64512.1|  539|Tribolium castaneum putative esteras...    23   2.1  
U09586-2|AAC47271.1|  712|Tribolium castaneum protease, reverse ...    21   4.8  
EF222296-1|ABN79656.2|  403|Tribolium castaneum arginine vasopre...    21   6.4  

>EF222290-1|ABN79650.1|  378|Tribolium castaneum adipokinetic
           hormone receptor protein.
          Length = 378

 Score = 22.6 bits (46), Expect = 2.1
 Identities = 6/11 (54%), Positives = 8/11 (72%)
 Frame = -3

Query: 427 HPSLEWYTACV 395
           HP++ WY  CV
Sbjct: 195 HPNITWYQQCV 205


>DQ422965-1|ABE02225.1|  378|Tribolium castaneum adipokinetic
           hormone receptor protein.
          Length = 378

 Score = 22.6 bits (46), Expect = 2.1
 Identities = 6/11 (54%), Positives = 8/11 (72%)
 Frame = -3

Query: 427 HPSLEWYTACV 395
           HP++ WY  CV
Sbjct: 195 HPNITWYQQCV 205


>AJ850294-1|CAH64514.1|  539|Tribolium castaneum putative esterase
           protein.
          Length = 539

 Score = 22.6 bits (46), Expect = 2.1
 Identities = 11/26 (42%), Positives = 16/26 (61%), Gaps = 1/26 (3%)
 Frame = -2

Query: 389 ITRID-NLLLVIPCLLYNIFTCDNDV 315
           +TR+D N    IP +LY  +T D D+
Sbjct: 337 LTRLDDNWNKYIPAILYYNYTVDRDL 362


>AJ850293-1|CAH64513.1|  539|Tribolium castaneum putative esterase
           protein.
          Length = 539

 Score = 22.6 bits (46), Expect = 2.1
 Identities = 11/26 (42%), Positives = 16/26 (61%), Gaps = 1/26 (3%)
 Frame = -2

Query: 389 ITRID-NLLLVIPCLLYNIFTCDNDV 315
           +TR+D N    IP +LY  +T D D+
Sbjct: 337 LTRLDDNWNKYIPAILYYNYTVDRDL 362


>AJ850292-1|CAH64512.1|  539|Tribolium castaneum putative esterase
           protein.
          Length = 539

 Score = 22.6 bits (46), Expect = 2.1
 Identities = 11/26 (42%), Positives = 16/26 (61%), Gaps = 1/26 (3%)
 Frame = -2

Query: 389 ITRID-NLLLVIPCLLYNIFTCDNDV 315
           +TR+D N    IP +LY  +T D D+
Sbjct: 337 LTRLDDNWNKYIPAILYYNYTVDRDL 362


>U09586-2|AAC47271.1|  712|Tribolium castaneum protease, reverse
           transcriptase andRNase H protein.
          Length = 712

 Score = 21.4 bits (43), Expect = 4.8
 Identities = 7/10 (70%), Positives = 10/10 (100%)
 Frame = +3

Query: 306 YIDDIIIASE 335
           YIDD+++ASE
Sbjct: 457 YIDDLLVASE 466


>EF222296-1|ABN79656.2|  403|Tribolium castaneum arginine
           vasopressin receptor protein.
          Length = 403

 Score = 21.0 bits (42), Expect = 6.4
 Identities = 10/27 (37%), Positives = 16/27 (59%)
 Frame = -2

Query: 380 IDNLLLVIPCLLYNIFTCDNDVVNVNF 300
           ID  + VI  LLY++ +C N  + + F
Sbjct: 296 IDGPVFVILTLLYSLNSCVNPWIYLAF 322


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 105,442
Number of Sequences: 336
Number of extensions: 2040
Number of successful extensions: 7
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7
length of database: 122,585
effective HSP length: 53
effective length of database: 104,777
effective search space used: 12154132
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)