Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= brS-1139
(664 letters)
Database: tribolium
336 sequences; 122,585 total letters
Searching.......................................................done
Score E
Sequences producing significant alignments: (bits) Value
EF222293-1|ABN79653.1| 434|Tribolium castaneum ecdysis triggeri... 27 0.14
U63132-1|AAB38392.1| 372|Tribolium castaneum decapentaplegic pr... 24 1.3
EF592538-1|ABQ95984.1| 582|Tribolium castaneum beta-N-acetylglu... 24 1.3
AJ415419-1|CAC94468.1| 441|Tribolium castaneum transcription fa... 24 1.3
EF468474-1|ABR25244.1| 516|Tribolium castaneum methoprene-toler... 23 1.7
EF222294-1|ABN79654.1| 451|Tribolium castaneum ecdysis triggeri... 22 3.9
S73225-1|AAB30811.1| 327|Tribolium castaneum protein ( Triboliu... 22 5.2
DQ855502-1|ABH88189.1| 126|Tribolium castaneum chemosensory pro... 21 9.0
DQ855495-1|ABH88182.1| 126|Tribolium castaneum chemosensory pro... 21 9.0
AY920544-1|AAX62142.1| 463|Tribolium castaneum cytochrome P450 ... 21 9.0
AM292322-1|CAL23134.1| 373|Tribolium castaneum gustatory recept... 21 9.0
>EF222293-1|ABN79653.1| 434|Tribolium castaneum ecdysis triggering
hormone receptorisoform A protein.
Length = 434
Score = 27.1 bits (57), Expect = 0.14
Identities = 13/53 (24%), Positives = 28/53 (52%), Gaps = 1/53 (1%)
Frame = +1
Query: 220 LPHSYFLLLESYLSDRR-FQVKLRDARSSLFACRAGVPQGSVLGPVLYNIFTS 375
+P F+L + + + + +++ + L+ CR V S + P+LYN+ +S
Sbjct: 304 IPFRVFILWIILVPEEQVYHLEIEKYYNILYFCRIMVYLNSAINPILYNLMSS 356
>U63132-1|AAB38392.1| 372|Tribolium castaneum decapentaplegic
protein protein.
Length = 372
Score = 23.8 bits (49), Expect = 1.3
Identities = 13/29 (44%), Positives = 14/29 (48%)
Frame = +1
Query: 523 KASAPKSHHITFTLRRDTCPPVKLGHDTL 609
K S P+ H LRRDT PP H L
Sbjct: 207 KKSPPEKH---LRLRRDTAPPQWYQHQPL 232
>EF592538-1|ABQ95984.1| 582|Tribolium castaneum
beta-N-acetylglucosaminidase NAG3 protein.
Length = 582
Score = 23.8 bits (49), Expect = 1.3
Identities = 9/13 (69%), Positives = 9/13 (69%)
Frame = +2
Query: 599 TIHCRNQPCVKYL 637
T C NQ CVKYL
Sbjct: 45 TWKCENQKCVKYL 57
>AJ415419-1|CAC94468.1| 441|Tribolium castaneum transcription
factor protein.
Length = 441
Score = 23.8 bits (49), Expect = 1.3
Identities = 16/80 (20%), Positives = 32/80 (40%)
Frame = -2
Query: 372 SKNVVEDRTKYGALGHSGSAGKERRSGITELDLKPSVTEIRL*QQKVGMWKVLFNFAEQS 193
++ V + KY + KER I + + P+ T+ + + G W F
Sbjct: 186 NEEVTALKIKYNPFAKAFLDAKERPDSIYQREYSPTFTQQQTQYSQYGSW-----FLPHQ 240
Query: 192 PVPNPIKSLLYVEKSSRTVL 133
P+ + + + + +RT L
Sbjct: 241 PIYPAVTATVQLSTCTRTTL 260
>EF468474-1|ABR25244.1| 516|Tribolium castaneum methoprene-tolerant
protein.
Length = 516
Score = 23.4 bits (48), Expect = 1.7
Identities = 10/23 (43%), Positives = 12/23 (52%)
Frame = -3
Query: 404 TAISGDWGKSLVKML*RTGPSTE 336
+ + GDW K L R GP TE
Sbjct: 168 SVLDGDWKKCFNIRLKRAGPRTE 190
>EF222294-1|ABN79654.1| 451|Tribolium castaneum ecdysis triggering
hormone receptorisoform B protein.
Length = 451
Score = 22.2 bits (45), Expect = 3.9
Identities = 10/35 (28%), Positives = 18/35 (51%)
Frame = +1
Query: 271 FQVKLRDARSSLFACRAGVPQGSVLGPVLYNIFTS 375
F++ + + L+ R S + P+LYNI +S
Sbjct: 324 FEIGFENYYNILYFSRIMFHINSAVNPILYNIISS 358
>S73225-1|AAB30811.1| 327|Tribolium castaneum protein ( Tribolium
castaneum homeodomainprotein mRNA, complete cds. ).
Length = 327
Score = 21.8 bits (44), Expect = 5.2
Identities = 11/35 (31%), Positives = 18/35 (51%)
Frame = +1
Query: 112 RNCLERKEYCSAAFLDVQQAFDRVWHRGLLCKIKK 216
R ER+ +A L + +A ++W + KIKK
Sbjct: 251 RYLTERRRQQLSAELGLNEAQIKIWFQNKRAKIKK 285
>DQ855502-1|ABH88189.1| 126|Tribolium castaneum chemosensory
protein 16 protein.
Length = 126
Score = 21.0 bits (42), Expect = 9.0
Identities = 7/17 (41%), Positives = 9/17 (52%)
Frame = -3
Query: 59 KPNWWSGIIWHASRQGD 9
KPNWW + QG+
Sbjct: 94 KPNWWQELESKFDPQGE 110
>DQ855495-1|ABH88182.1| 126|Tribolium castaneum chemosensory
protein 9 protein.
Length = 126
Score = 21.0 bits (42), Expect = 9.0
Identities = 7/17 (41%), Positives = 9/17 (52%)
Frame = -3
Query: 59 KPNWWSGIIWHASRQGD 9
KPNWW + QG+
Sbjct: 94 KPNWWQELESKFDPQGE 110
>AY920544-1|AAX62142.1| 463|Tribolium castaneum cytochrome P450
monooxygenase protein.
Length = 463
Score = 21.0 bits (42), Expect = 9.0
Identities = 8/15 (53%), Positives = 10/15 (66%)
Frame = +1
Query: 532 APKSHHITFTLRRDT 576
A K H TFT+ +DT
Sbjct: 360 ASKPHERTFTVEKDT 374
>AM292322-1|CAL23134.1| 373|Tribolium castaneum gustatory receptor
candidate 1 protein.
Length = 373
Score = 21.0 bits (42), Expect = 9.0
Identities = 10/25 (40%), Positives = 15/25 (60%)
Frame = +1
Query: 469 LLQTQLDVTNTWLTKWRIKASAPKS 543
+LQT+ + N LTK +K A K+
Sbjct: 190 MLQTRFVILNKQLTKITVKNFATKT 214
Database: tribolium
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 122,585
Number of sequences in database: 336
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 172,317
Number of Sequences: 336
Number of extensions: 3725
Number of successful extensions: 13
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 13
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 13
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 17177325
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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