Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= brS-1135
(610 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
06_01_0926 - 7139220-7139318,7139394-7139478,7139573-7139643,713... 64 6e-11
02_05_0094 - 25758213-25758479,25758886-25758975,25759090-257591... 62 3e-10
04_04_0611 - 26594737-26594991,26595307-26595396,26595490-265955... 59 3e-09
12_02_0498 + 19721038-19721178,19721376-19721472,19721576-197216... 57 1e-08
03_02_0476 + 8768182-8768313,8768734-8768833,8768949-8768986,876... 57 1e-08
10_08_0547 - 18682357-18682683,18682971-18683060,18683279-186833... 50 1e-06
12_02_0992 + 25083397-25083537,25084198-25084228,25084971-250851... 39 0.004
06_01_0579 + 4099039-4099086,4099798-4099848,4100151-4100286,410... 37 0.014
03_02_0490 - 8840577-8840914,8841009-8841067,8841168-8841283,884... 37 0.014
08_01_0821 + 7966587-7966832 36 0.025
03_05_0383 + 23656041-23656096,23657189-23657255,23657599-236577... 32 0.41
02_05_0657 + 30673852-30674624,30674815-30674833 31 0.54
10_06_0116 + 10945231-10945501,10946018-10946241,10946329-109467... 31 0.71
03_01_0286 - 2208242-2208249,2208399-2208506,2209482-2210226 31 0.71
04_04_1117 + 31029306-31029824 31 0.94
12_02_0971 + 24949137-24950534 30 1.2
09_04_0236 - 15935290-15936024 29 2.9
10_07_0101 - 12872296-12873288 28 5.0
08_02_0299 + 15487202-15487227,15487369-15487491,15488277-154883... 28 5.0
02_04_0583 + 24078766-24079800,24080585-24081643 28 5.0
02_03_0189 + 16182358-16182925,16183133-16183188 28 5.0
07_01_0207 + 1528951-1529499 28 6.7
01_06_1283 - 35977646-35978703,35980177-35980272,35980627-35980759 28 6.7
05_01_0502 + 4191443-4191769,4191770-4191892,4194161-4194313,419... 27 8.8
05_01_0029 + 187769-188707,188971-189246,189978-190174,190263-19... 27 8.8
01_06_0965 + 33452433-33453176 27 8.8
>06_01_0926 -
7139220-7139318,7139394-7139478,7139573-7139643,
7139996-7140076,7140805-7140895,7141242-7141330,
7141749-7141802,7141906-7142085,7142175-7142237,
7142575-7142705,7142807-7142900,7143343-7143684,
7143957-7144348,7145010-7148487,7149101-7149187,
7149324-7149367,7149495-7149591,7150429-7150572
Length = 1873
Score = 64.5 bits (150), Expect = 6e-11
Identities = 44/167 (26%), Positives = 70/167 (41%), Gaps = 2/167 (1%)
Frame = +3
Query: 102 CPRCGGVVFAAEQVLAKGREWHRKCFKCRDCTKTLDSIIACDGPDGEVYCKTCYGKKWGP 281
C CG V+ E++ A GR +HR CF+C C TL +G +YCK Y +
Sbjct: 13 CDSCGRTVYPVEELAADGRVYHRPCFRCTHCKATL-QFSNYSSVEGVLYCKPHYDQILKS 71
Query: 282 HGYGFACGSGFLQTDGLTEEEISASRPFYNPDTTSIKAPKGQGCPRCGGMVFAAEQQLAK 461
G + F T + E S +S+ C C V+ E+
Sbjct: 72 TG---SLEKSFEGTSKSAKAEKSNGNKGQPNRFSSMFVGTQDKCVVCNKTVYPLEKVNLN 128
Query: 462 GTMWHKKCFNCAE--CHRPLDSMLACDGPDKEIHCRACYAKLFGPKG 596
G+ +HK CF C C + + +G +++C+ +++LF KG
Sbjct: 129 GSSYHKSCFRCTHGGCTLSPSNNVTHEG---KLYCKTHHSQLFMVKG 172
Score = 38.7 bits (86), Expect = 0.004
Identities = 14/37 (37%), Positives = 19/37 (51%)
Frame = +3
Query: 405 QGCPRCGGMVFAAEQQLAKGTMWHKKCFNCAECHRPL 515
Q C CG V+ E+ A G ++H+ CF C C L
Sbjct: 11 QKCDSCGRTVYPVEELAADGRVYHRPCFRCTHCKATL 47
>02_05_0094 -
25758213-25758479,25758886-25758975,25759090-25759118,
25759208-25759307,25759411-25759545
Length = 206
Score = 62.5 bits (145), Expect = 3e-10
Identities = 45/167 (26%), Positives = 71/167 (42%), Gaps = 2/167 (1%)
Frame = +3
Query: 102 CPRCGGVVFAAEQVLAKGREWHRKCFKCRDCTKTLDSIIACDGPDGEVYCKTCYGKKWGP 281
C C V + + A G +H+ CFKC C TL S+ DG +YCKT + + +
Sbjct: 10 CKACDKTVHFIDLLTADGVSYHKTCFKCSHCKGTL-SMCNYSSMDGVLYCKTHFEQLFKE 68
Query: 282 HGYGFACGSGFLQTDGLTEEEISASRPFYNPDTTSIKAPKGQGCPRCGGMVFAAEQQLAK 461
G + F Q +E+ P +S + C C V+ E+ +
Sbjct: 69 TG---SFSKKFSQGGKSSEKSDQGRAP---SKLSSAFSGTQDKCAACQKTVYPLEKLTLE 122
Query: 462 GTMWHKKCFNCAE--CHRPLDSMLACDGPDKEIHCRACYAKLFGPKG 596
G +HK CF C+ C S A +G ++C+ +++LF KG
Sbjct: 123 GESYHKSCFKCSHGGCILTTSSYAALNG---ILYCKIHFSQLFKEKG 166
>04_04_0611 -
26594737-26594991,26595307-26595396,26595490-26595515,
26595603-26595702,26595820-26595954
Length = 201
Score = 58.8 bits (136), Expect = 3e-09
Identities = 45/167 (26%), Positives = 72/167 (43%), Gaps = 2/167 (1%)
Frame = +3
Query: 102 CPRCGGVVFAAEQVLAKGREWHRKCFKCRDCTKTLDSIIACDGPDGEVYCKTCYGKKWGP 281
C C V + + A G +H+ CFKC C K + S+ + DG +YCKT + + +
Sbjct: 10 CTACDKTVHFIDLLTADGVPYHKTCFKCSHC-KGILSMCSYSSMDGVLYCKTHFEQLFKE 68
Query: 282 HGYGFACGSGFLQTDGLTEEEISASRPFYNPDTTSIKAPKGQGCPRCGGMVFAAEQQLAK 461
G + F T++E+ A P S + C C V+ E+ +
Sbjct: 69 TG---SFSKKFAPGCRSTDKEL-ARAP---SKICSAFSGTQDKCAACQKTVYPLEKLTLE 121
Query: 462 GTMWHKKCFNCAE--CHRPLDSMLACDGPDKEIHCRACYAKLFGPKG 596
G +HK CF C+ C S A +G ++C+ + +LF KG
Sbjct: 122 GESYHKSCFKCSHGGCILTTSSYAALNG---VLYCKIHFGQLFMEKG 165
>12_02_0498 +
19721038-19721178,19721376-19721472,19721576-19721619,
19722120-19722203,19722441-19722662
Length = 195
Score = 56.8 bits (131), Expect = 1e-08
Identities = 39/167 (23%), Positives = 72/167 (43%), Gaps = 2/167 (1%)
Frame = +3
Query: 102 CPRCGGVVFAAEQVLAKGREWHRKCFKCRDCTKTLDSIIACDGPDGEVYCKTCYGKKWGP 281
C C V+ +++ A R +H+ CF+C C TL + + +G +YC+ + + +
Sbjct: 12 CMACDKTVYLVDKLTADNRVYHKACFRCHHCKGTL-KLANYNSFEGVLYCRPHFDQLFKR 70
Query: 282 HGYGFACGSGFLQTDGLTEEEISASRPFYNPDTTSIKAPKGQGCPRCGGMVFAAEQQLAK 461
G + F T + + E + +S A + C C V+ E+
Sbjct: 71 TG---SLDKSFEGTPKVVKPEKTVENE-NAIKVSSAFAGTREKCVGCNKTVYPIERVTVN 126
Query: 462 GTMWHKKCFNCAE--CHRPLDSMLACDGPDKEIHCRACYAKLFGPKG 596
TM+HK CF C C + +A +G +++C+ + +L KG
Sbjct: 127 NTMYHKSCFKCCHGGCTISPSNYIAHEG---KLYCKHHHIQLIKEKG 170
Score = 36.7 bits (81), Expect = 0.014
Identities = 21/66 (31%), Positives = 32/66 (48%), Gaps = 2/66 (3%)
Frame = +3
Query: 63 IDTASIKAPPGKGCPRCGGVVFAAEQVLAKGREWHRKCFKC--RDCTKTLDSIIACDGPD 236
I +S A + C C V+ E+V +H+ CFKC CT + + IA +
Sbjct: 97 IKVSSAFAGTREKCVGCNKTVYPIERVTVNNTMYHKSCFKCCHGGCTISPSNYIA---HE 153
Query: 237 GEVYCK 254
G++YCK
Sbjct: 154 GKLYCK 159
>03_02_0476 +
8768182-8768313,8768734-8768833,8768949-8768986,
8769102-8769191,8769465-8769695
Length = 196
Score = 56.8 bits (131), Expect = 1e-08
Identities = 39/167 (23%), Positives = 69/167 (41%), Gaps = 2/167 (1%)
Frame = +3
Query: 102 CPRCGGVVFAAEQVLAKGREWHRKCFKCRDCTKTLDSIIACDGPDGEVYCKTCYGKKWGP 281
C C V+ +Q+ G +HR CFKC+ C TL S+ +G YCK + + +
Sbjct: 9 CKVCTKTVYPMDQLSTDGVVFHRSCFKCQHCKSTL-SLGNYSSIEGVPYCKPHFEQLFKE 67
Query: 282 HGYGFACGSGFLQTDGLTEEEISASRPFYNPDTTSIKAPKGQGCPRCGGMVFAAEQQLAK 461
G + F E+++ + + + C C + E+ +
Sbjct: 68 TG---SYNKSFQSPAKPASEKLTPELTRSPSKAARMFSGTQEKCATCSKTAYPLEKVTVE 124
Query: 462 GTMWHKKCFNCAE--CHRPLDSMLACDGPDKEIHCRACYAKLFGPKG 596
G +HK CF C+ C + A +G ++C+ +++LF KG
Sbjct: 125 GQAYHKSCFKCSHGGCAISPSNYAALEG---ILYCKHHFSQLFKEKG 168
Score = 33.5 bits (73), Expect = 0.13
Identities = 17/64 (26%), Positives = 28/64 (43%)
Frame = +3
Query: 405 QGCPRCGGMVFAAEQQLAKGTMWHKKCFNCAECHRPLDSMLACDGPDKEIHCRACYAKLF 584
Q C C V+ +Q G ++H+ CF C C L S+ + +C+ + +LF
Sbjct: 7 QKCKVCTKTVYPMDQLSTDGVVFHRSCFKCQHCKSTL-SLGNYSSIEGVPYCKPHFEQLF 65
Query: 585 GPKG 596
G
Sbjct: 66 KETG 69
>10_08_0547 -
18682357-18682683,18682971-18683060,18683279-18683301,
18683397-18683496,18683615-18683749
Length = 224
Score = 50.4 bits (115), Expect = 1e-06
Identities = 36/135 (26%), Positives = 56/135 (41%), Gaps = 3/135 (2%)
Frame = +3
Query: 102 CPRCGGVVFAAEQVLAKGREWHRKCFKCRDCTKTLDSIIACDGPDGEVYCKTCYG---KK 272
C C V + + A +H+ CF+C C TL S+ + DG +YCKT + K+
Sbjct: 10 CNACDKTVHFIDLLTADSIPYHKSCFRCSHCKGTL-SMCSYSSMDGVLYCKTHFEQLFKE 68
Query: 273 WGPHGYGFACGSGFLQTDGLTEEEISASRPFYNPDTTSIKAPKGQGCPRCGGMVFAAEQQ 452
G F G T +E+ S+ +S+ C C V+ E+
Sbjct: 69 TGTFKKNFPSG-----TKANSEQAKIPSK------LSSVFCGTQDKCTACKKTVYPLEKM 117
Query: 453 LAKGTMWHKKCFNCA 497
+G +H+ CF CA
Sbjct: 118 TMEGECYHRTCFKCA 132
Score = 36.3 bits (80), Expect = 0.019
Identities = 18/62 (29%), Positives = 27/62 (43%)
Frame = +3
Query: 411 CPRCGGMVFAAEQQLAKGTMWHKKCFNCAECHRPLDSMLACDGPDKEIHCRACYAKLFGP 590
C C V + A +HK CF C+ C L SM + D ++C+ + +LF
Sbjct: 10 CNACDKTVHFIDLLTADSIPYHKSCFRCSHCKGTL-SMCSYSSMDGVLYCKTHFEQLFKE 68
Query: 591 KG 596
G
Sbjct: 69 TG 70
Score = 33.9 bits (74), Expect = 0.10
Identities = 27/114 (23%), Positives = 48/114 (42%), Gaps = 3/114 (2%)
Frame = +3
Query: 30 ANGDQAPKTTVIDTASIKAPPGKGCPRCGGVVFAAEQVLAKGREWHRKCFKCR--DCTKT 203
AN +QA + + +S+ C C V+ E++ +G +HR CFKC C T
Sbjct: 82 ANSEQAKIPSKL--SSVFCGTQDKCTACKKTVYPLEKMTMEGECYHRTCFKCAHGGCLLT 139
Query: 204 LDSIIACDGPDGEVYCKTCYGKKWGPHG-YGFACGSGFLQTDGLTEEEISASRP 362
S + +G +YC+ + + + G Y + E E++ + P
Sbjct: 140 NASYAS---HNGILYCQNHFWQLFKKSGSYDNLLKPASAAAENTVESEVAVAEP 190
>12_02_0992 +
25083397-25083537,25084198-25084228,25084971-25085139,
25085228-25085291,25085408-25085474,25086543-25086586,
25086835-25086922,25087079-25087238,25087659-25087779,
25087859-25087942,25088043-25088162,25088689-25088901,
25088995-25089054,25089144-25089262,25089407-25089465,
25089585-25089919
Length = 624
Score = 38.7 bits (86), Expect = 0.004
Identities = 14/43 (32%), Positives = 23/43 (53%)
Frame = +3
Query: 465 TMWHKKCFNCAECHRPLDSMLACDGPDKEIHCRACYAKLFGPK 593
++WH +CF C C++P+ D+ H ++CY F PK
Sbjct: 275 SVWHPQCFRCFACNKPISEYEFAMHEDQPYH-KSCYKDFFHPK 316
Score = 29.5 bits (63), Expect = 2.2
Identities = 12/34 (35%), Positives = 17/34 (50%)
Frame = +3
Query: 162 WHRKCFKCRDCTKTLDSIIACDGPDGEVYCKTCY 263
WH +CF+C C K + D + Y K+CY
Sbjct: 277 WHPQCFRCFACNKPISEYEFAMHED-QPYHKSCY 309
>06_01_0579 +
4099039-4099086,4099798-4099848,4100151-4100286,
4100287-4100401,4100496-4100528,4101037-4101166,
4101663-4101751,4102042-4102148,4102238-4102309,
4102384-4102764,4104907-4105064,4105581-4105674,
4106082-4106089,4106297-4106387,4107136-4107289,
4108257-4108377,4108468-4108551,4108946-4109065,
4109181-4109393,4109482-4109544,4109668-4109783,
4110132-4110190,4111126-4111445
Length = 920
Score = 36.7 bits (81), Expect = 0.014
Identities = 18/62 (29%), Positives = 28/62 (45%), Gaps = 1/62 (1%)
Frame = +3
Query: 411 CPRCGGMVFAAEQQLAKGTMWHKKCFNCAECHRPL-DSMLACDGPDKEIHCRACYAKLFG 587
C C + G +WH +CF C C++P+ D + G + H + CY + F
Sbjct: 558 CAGCHSEIGHGRFLSCMGAVWHPECFRCHACNQPIYDYEFSMSG-NHPYH-KTCYKERFH 615
Query: 588 PK 593
PK
Sbjct: 616 PK 617
Score = 35.5 bits (78), Expect = 0.033
Identities = 17/61 (27%), Positives = 27/61 (44%), Gaps = 1/61 (1%)
Frame = +3
Query: 102 CPRCGGVVFAAEQVLAKGREWHRKCFKCRDCTKTL-DSIIACDGPDGEVYCKTCYGKKWG 278
C C + + G WH +CF+C C + + D + G Y KTCY +++
Sbjct: 558 CAGCHSEIGHGRFLSCMGAVWHPECFRCHACNQPIYDYEFSMSG--NHPYHKTCYKERFH 615
Query: 279 P 281
P
Sbjct: 616 P 616
>03_02_0490 -
8840577-8840914,8841009-8841067,8841168-8841283,
8841578-8841640,8841826-8842038,8842211-8842330,
8842453-8842578,8842593-8842749,8842830-8842962,
8843054-8843138,8843305-8843421
Length = 508
Score = 36.7 bits (81), Expect = 0.014
Identities = 17/56 (30%), Positives = 23/56 (41%), Gaps = 3/56 (5%)
Frame = +3
Query: 366 YNPDTTSIKAPKGQGCPRCGGM---VFAAEQQLAKGTMWHKKCFNCAECHRPLDSM 524
YNP S + +G CGG + G WH +CF C+ C P+ M
Sbjct: 96 YNPCAPSQTQARSRGYRVCGGCKHEIGHGHYLSCLGMYWHPQCFRCSSCRHPIREM 151
>08_01_0821 + 7966587-7966832
Length = 81
Score = 35.9 bits (79), Expect = 0.025
Identities = 20/58 (34%), Positives = 33/58 (56%), Gaps = 6/58 (10%)
Frame = +3
Query: 375 DTTSIKAPKGQGCPRCGGMVFAAEQQLAKGTMW------HKKCFNCAECHRPLDSMLA 530
+T S KAP CPRCGG V A + + ++ + +KK F+C+ C R L ++++
Sbjct: 21 ETASRKAPGA--CPRCGGAVVATDVESSRRILCLPLCLRNKKKFSCSRCRRALVAIVS 76
Score = 31.1 bits (67), Expect = 0.71
Identities = 21/58 (36%), Positives = 31/58 (53%), Gaps = 6/58 (10%)
Frame = +3
Query: 66 DTASIKAPPGKGCPRCGGVVFAAE-----QVLAKGR-EWHRKCFKCRDCTKTLDSIIA 221
+TAS KAP CPRCGG V A + ++L ++K F C C + L +I++
Sbjct: 21 ETASRKAPGA--CPRCGGAVVATDVESSRRILCLPLCLRNKKKFSCSRCRRALVAIVS 76
>03_05_0383 +
23656041-23656096,23657189-23657255,23657599-23657745,
23658094-23658178,23658380-23658551,23660056-23660176,
23660431-23660550,23660861-23661073,23661154-23661213,
23661306-23661424,23661609-23661667,23661798-23662132
Length = 517
Score = 31.9 bits (69), Expect = 0.41
Identities = 12/34 (35%), Positives = 16/34 (47%)
Frame = +3
Query: 465 TMWHKKCFNCAECHRPLDSMLACDGPDKEIHCRA 566
++WH +CF C C RP+ D I RA
Sbjct: 196 SVWHPQCFRCFACDRPISEYEIPTNKDGHIEYRA 229
>02_05_0657 + 30673852-30674624,30674815-30674833
Length = 263
Score = 31.5 bits (68), Expect = 0.54
Identities = 12/24 (50%), Positives = 15/24 (62%)
Frame = +3
Query: 237 GEVYCKTCYGKKWGPHGYGFACGS 308
GEVY CY + WG G GF+ G+
Sbjct: 220 GEVYLGKCYARFWGNGGGGFSSGA 243
>10_06_0116 +
10945231-10945501,10946018-10946241,10946329-10946725,
10946804-10946893,10947118-10947239,10947390-10947428
Length = 380
Score = 31.1 bits (67), Expect = 0.71
Identities = 15/42 (35%), Positives = 20/42 (47%)
Frame = +3
Query: 480 KCFNCAECHRPLDSMLACDGPDKEIHCRACYAKLFGPKGFGY 605
+CF C + P++ +L D P HCR C A G F Y
Sbjct: 29 ECFQCGSINLPVEKLLF-DLP--AFHCRGCEAPFLGEMNFCY 67
>03_01_0286 - 2208242-2208249,2208399-2208506,2209482-2210226
Length = 286
Score = 31.1 bits (67), Expect = 0.71
Identities = 27/91 (29%), Positives = 38/91 (41%), Gaps = 5/91 (5%)
Frame = +3
Query: 66 DTASIKAPPGKGCPRCGGVVFAAEQVLAKGR-EWHRKCFKCRDC-TKTLDSI-IACDG-P 233
DTA + G G + +QV A + E C C T+ + + + C G P
Sbjct: 162 DTAFAQMEASVGGGNGGFYATSYQQVYAMAQCEGDLSSGDCGQCVTQAVQHVEVECGGAP 221
Query: 234 DGEVYCKTCY-GKKWGPHGYGFACGSGFLQT 323
G+VY + CY + PHG G G QT
Sbjct: 222 SGQVYLEKCYISYSYYPHGIPHGGGIGGQQT 252
>04_04_1117 + 31029306-31029824
Length = 172
Score = 30.7 bits (66), Expect = 0.94
Identities = 15/35 (42%), Positives = 19/35 (54%)
Frame = +3
Query: 495 AECHRPLDSMLACDGPDKEIHCRACYAKLFGPKGF 599
A C R LD L + PD+ H CY K+ GP+ F
Sbjct: 115 ARCDRALDDWLRDESPDRLRH--LCYDKVLGPELF 147
>12_02_0971 + 24949137-24950534
Length = 465
Score = 30.3 bits (65), Expect = 1.2
Identities = 22/92 (23%), Positives = 40/92 (43%)
Frame = -3
Query: 305 AASESVTMRSPFLSVASFAIDFAIRSIASNDGVQSFCAIAALETFAMPLAAFGQNLFSSK 126
AAS S + SP++++ F + +A G ++ + LAA G+ L++
Sbjct: 51 AASPSPYVMSPWVNLPGFGVGGGDEMVAGGGGTGLLGSLVKEDGHVYSLAAAGELLYTGT 110
Query: 125 HNSTATRAALARRGFNGCSINHGGLRCLITIG 30
+S R RR F G G ++ ++ G
Sbjct: 111 -DSKNVRVWRHRREFAGFRSGSGLVKAIVVAG 141
>09_04_0236 - 15935290-15936024
Length = 244
Score = 29.1 bits (62), Expect = 2.9
Identities = 17/37 (45%), Positives = 18/37 (48%)
Frame = +3
Query: 114 GGVVFAAEQVLAKGREWHRKCFKCRDCTKTLDSIIAC 224
GG A Q LAKGREW R C C +D I C
Sbjct: 207 GGARCALTQ-LAKGREWRR----CPSCRAMIDKIDGC 238
>10_07_0101 - 12872296-12873288
Length = 330
Score = 28.3 bits (60), Expect = 5.0
Identities = 16/42 (38%), Positives = 23/42 (54%), Gaps = 1/42 (2%)
Frame = +1
Query: 154 AASGIANVSSAAIAQKLWTP-SLLAMDLMAKSIAKLATERNG 276
AAS VS+A AQ +WTP +++ LM ++ A R G
Sbjct: 139 AASAAGGVSAAVAAQVVWTPVDVVSQRLMVQTAAAGPPYRGG 180
>08_02_0299 +
15487202-15487227,15487369-15487491,15488277-15488397,
15488572-15488700,15489954-15490063,15490139-15490322,
15491155-15491346,15492190-15492411,15492501-15492687,
15494009-15494103
Length = 462
Score = 28.3 bits (60), Expect = 5.0
Identities = 11/42 (26%), Positives = 20/42 (47%)
Frame = +3
Query: 456 AKGTMWHKKCFNCAECHRPLDSMLACDGPDKEIHCRACYAKL 581
++ T+ H C NC + + D++ D+ HC C +L
Sbjct: 155 SRNTIQHYICPNCKKRYSAFDALQLISYTDEYFHCENCNGEL 196
>02_04_0583 + 24078766-24079800,24080585-24081643
Length = 697
Score = 28.3 bits (60), Expect = 5.0
Identities = 17/56 (30%), Positives = 25/56 (44%)
Frame = +2
Query: 401 GPRLSALWWDGLCCRAAVGQGHYVAQEVL*LCGMSSTTGLDVSVRRSRQGDPLPRL 568
G LS W + RAA + H+V QE + G + + R+GDP P +
Sbjct: 245 GLDLSDPTWGEVVERAAEAEAHFVPQEAKPIEGKAKKAEEKLMAVDPRKGDPAPAM 300
>02_03_0189 + 16182358-16182925,16183133-16183188
Length = 207
Score = 28.3 bits (60), Expect = 5.0
Identities = 16/59 (27%), Positives = 29/59 (49%)
Frame = +3
Query: 264 GKKWGPHGYGFACGSGFLQTDGLTEEEISASRPFYNPDTTSIKAPKGQGCPRCGGMVFA 440
G +G + + + G+ + TD + ++ + +YN S AP G+GC MV+A
Sbjct: 88 GGPYGENIFWGSAGANWTATDAVASW--ASEKQWYNCSDDSCDAPGGRGCTHYKQMVWA 144
>07_01_0207 + 1528951-1529499
Length = 182
Score = 27.9 bits (59), Expect = 6.7
Identities = 11/32 (34%), Positives = 17/32 (53%)
Frame = +3
Query: 348 SASRPFYNPDTTSIKAPKGQGCPRCGGMVFAA 443
+A +Y+PDT AP G+ C +V+ A
Sbjct: 116 AAEEQWYDPDTNGCSAPAGESCDHYTQLVWNA 147
>01_06_1283 - 35977646-35978703,35980177-35980272,35980627-35980759
Length = 428
Score = 27.9 bits (59), Expect = 6.7
Identities = 14/48 (29%), Positives = 18/48 (37%)
Frame = +2
Query: 389 QGSEGPRLSALWWDGLCCRAAVGQGHYVAQEVL*LCGMSSTTGLDVSV 532
Q P WWDG R A G G E G +GL+ ++
Sbjct: 23 QAMPAPAPGGDWWDGFARRLAAGGGIVRCSEAANHLGRGGCSGLETTM 70
>05_01_0502 +
4191443-4191769,4191770-4191892,4194161-4194313,
4194420-4194505,4194648-4194732,4194871-4194990,
4195066-4195134,4195351-4195506
Length = 372
Score = 27.5 bits (58), Expect = 8.8
Identities = 15/39 (38%), Positives = 21/39 (53%)
Frame = -1
Query: 160 SRPLAKTCSAANTTPPQRGQPLPGGALMDAVSITVVLGA 44
+R A +AA + P + G GGA+ +S TV LGA
Sbjct: 15 ARKAAVATAAAASPPAEGGGKANGGAVAGGISRTVQLGA 53
>05_01_0029 + 187769-188707,188971-189246,189978-190174,190263-190404,
190584-190862,190941-191013,191331-191379,192169-192433,
192576-192631,192777-192845,193028-193139,193682-193771,
193955-194125,194449-194506,194970-195128,195379-195401
Length = 985
Score = 27.5 bits (58), Expect = 8.8
Identities = 15/44 (34%), Positives = 17/44 (38%), Gaps = 3/44 (6%)
Frame = +3
Query: 183 CRDCTKTLDSIIACDGPDGEVYCKTCY---GKKWGPHGYGFACG 305
C C L + + PD V C CY G PHG F G
Sbjct: 882 CDSCRARLGTKLFVMYPDDSVVCYRCYRNQGDSASPHGRNFRKG 925
>01_06_0965 + 33452433-33453176
Length = 247
Score = 27.5 bits (58), Expect = 8.8
Identities = 10/24 (41%), Positives = 13/24 (54%)
Frame = -1
Query: 475 CHIVPLANCCSAAKTIPPQRGQPW 404
C +VP + AAK P G+PW
Sbjct: 131 CRVVPAPDLAPAAKQFPTFLGRPW 154
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,983,487
Number of Sequences: 37544
Number of extensions: 442384
Number of successful extensions: 1434
Number of sequences better than 10.0: 26
Number of HSP's better than 10.0 without gapping: 1328
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1421
length of database: 14,793,348
effective HSP length: 79
effective length of database: 11,827,372
effective search space used: 1454766756
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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