Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= brS-1135
         (610 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY752895-1|AAV30069.1|   95|Anopheles gambiae peroxidase 3 protein.    27   0.63 
AB090823-2|BAC57922.1| 1154|Anopheles gambiae reverse transcript...    24   3.3  
DQ437579-1|ABD96049.1|  575|Anopheles gambiae short neuropeptide...    24   4.4  
AJ618920-1|CAF01999.1|  204|Anopheles gambiae putative odorant-b...    23   5.8  
AB090820-2|BAC57916.1| 1222|Anopheles gambiae reverse transcript...    23   5.8  
U29486-1|AAC46995.1|  695|Anopheles gambiae ATP-binding-cassette...    23   7.7  
U29485-1|AAC46994.1|  695|Anopheles gambiae ATP-binding-cassette...    23   7.7  
U29484-1|AAC47423.1|  673|Anopheles gambiae ATP-binding-cassette...    23   7.7  

>AY752895-1|AAV30069.1|   95|Anopheles gambiae peroxidase 3 protein.
          Length = 95

 Score = 26.6 bits (56), Expect = 0.63
 Identities = 12/38 (31%), Positives = 21/38 (55%)
 Frame = -3

Query: 191 IAALETFAMPLAAFGQNLFSSKHNSTATRAALARRGFN 78
           +A + ++  P+AA    LF  +HN  AT+  L   G++
Sbjct: 2   VADIRSYQSPMAATVHLLFLREHNRLATQLRLLNAGWS 39


>AB090823-2|BAC57922.1| 1154|Anopheles gambiae reverse transcriptase
            protein.
          Length = 1154

 Score = 24.2 bits (50), Expect = 3.3
 Identities = 9/15 (60%), Positives = 10/15 (66%)
 Frame = +3

Query: 102  CPRCGGVVFAAEQVL 146
            CPRC GVV   E V+
Sbjct: 956  CPRCPGVVEGVEHVM 970


>DQ437579-1|ABD96049.1|  575|Anopheles gambiae short neuropeptide F
           receptor protein.
          Length = 575

 Score = 23.8 bits (49), Expect = 4.4
 Identities = 9/12 (75%), Positives = 9/12 (75%)
 Frame = -1

Query: 478 LCHIVPLANCCS 443
           LCH VPLA  CS
Sbjct: 167 LCHTVPLAQGCS 178


>AJ618920-1|CAF01999.1|  204|Anopheles gambiae putative
           odorant-binding protein OBPjj4 protein.
          Length = 204

 Score = 23.4 bits (48), Expect = 5.8
 Identities = 9/22 (40%), Positives = 12/22 (54%)
 Frame = +3

Query: 339 EEISASRPFYNPDTTSIKAPKG 404
           E+  A+ PF  P  T  K P+G
Sbjct: 55  EKCKAAHPFKPPQNTDDKGPRG 76


>AB090820-2|BAC57916.1| 1222|Anopheles gambiae reverse transcriptase
            protein.
          Length = 1222

 Score = 23.4 bits (48), Expect = 5.8
 Identities = 10/26 (38%), Positives = 13/26 (50%)
 Frame = +3

Query: 90   PGKGCPRCGGVVFAAEQVLAKGREWH 167
            P   CPRC G V +   VL +   +H
Sbjct: 946  PSAECPRCPGSVESVAHVLFQCEVFH 971


>U29486-1|AAC46995.1|  695|Anopheles gambiae ATP-binding-cassette
           protein protein.
          Length = 695

 Score = 23.0 bits (47), Expect = 7.7
 Identities = 15/41 (36%), Positives = 23/41 (56%), Gaps = 5/41 (12%)
 Frame = +3

Query: 45  APKTTVIDTASIKAPPG-KGCPRC----GGVVFAAEQVLAK 152
           A KTT+++  + ++PPG K  P       GV   AEQ+ A+
Sbjct: 137 AGKTTLLNALAFRSPPGVKISPNAVRALNGVPVNAEQLRAR 177


>U29485-1|AAC46994.1|  695|Anopheles gambiae ATP-binding-cassette
           protein protein.
          Length = 695

 Score = 23.0 bits (47), Expect = 7.7
 Identities = 15/41 (36%), Positives = 23/41 (56%), Gaps = 5/41 (12%)
 Frame = +3

Query: 45  APKTTVIDTASIKAPPG-KGCPRC----GGVVFAAEQVLAK 152
           A KTT+++  + ++PPG K  P       GV   AEQ+ A+
Sbjct: 137 AGKTTLLNALAFRSPPGVKISPNAVRALNGVPVNAEQLRAR 177


>U29484-1|AAC47423.1|  673|Anopheles gambiae ATP-binding-cassette
           protein protein.
          Length = 673

 Score = 23.0 bits (47), Expect = 7.7
 Identities = 15/41 (36%), Positives = 23/41 (56%), Gaps = 5/41 (12%)
 Frame = +3

Query: 45  APKTTVIDTASIKAPPG-KGCPRC----GGVVFAAEQVLAK 152
           A KTT+++  + ++PPG K  P       GV   AEQ+ A+
Sbjct: 115 AGKTTLLNALAFRSPPGVKISPNAVRALNGVPVNAEQLRAR 155


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 695,115
Number of Sequences: 2352
Number of extensions: 15497
Number of successful extensions: 40
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 36
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 40
length of database: 563,979
effective HSP length: 61
effective length of database: 420,507
effective search space used: 59291487
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)