Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= brS-1134
         (655 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY600513-1|AAT11861.1|  314|Tribolium castaneum spalt-like prote...    27   0.13 
DQ414246-1|ABD63008.1|  126|Tribolium castaneum odd-skipped prot...    23   1.7  
AY316682-1|AAQ83696.1|  456|Tribolium castaneum Sp-like zinc fin...    22   5.1  
AM292361-1|CAL23173.2|  373|Tribolium castaneum gustatory recept...    22   5.1  
AJ845189-1|CAH60166.1|  515|Tribolium castaneum putative esteras...    21   6.7  
AJ845188-1|CAH60165.1|  517|Tribolium castaneum putative esteras...    21   6.7  
DQ414248-1|ABD63010.2|  311|Tribolium castaneum sloppy-paired pr...    21   8.9  
AM292372-1|CAL23184.2|  771|Tribolium castaneum gustatory recept...    21   8.9  
AF356647-1|AAK43700.1| 1156|Tribolium castaneum teashirt-like pr...    21   8.9  

>AY600513-1|AAT11861.1|  314|Tribolium castaneum spalt-like protein
           protein.
          Length = 314

 Score = 27.1 bits (57), Expect = 0.13
 Identities = 16/32 (50%), Positives = 21/32 (65%), Gaps = 1/32 (3%)
 Frame = -1

Query: 190 SESTGQATAASMSFG-VSANPKS*STRRLGQW 98
           S STGQ   A+ SFG V++ P S S+  LGQ+
Sbjct: 45  SISTGQRLPANFSFGQVNSPPSSTSSGSLGQF 76


>DQ414246-1|ABD63008.1|  126|Tribolium castaneum odd-skipped
           protein.
          Length = 126

 Score = 23.4 bits (48), Expect = 1.7
 Identities = 8/21 (38%), Positives = 10/21 (47%)
 Frame = +1

Query: 22  PYLFKYNQRCLFYHSCWVTGP 84
           PY ++Y Q    YH     GP
Sbjct: 40  PYYYQYLQNAALYHKLQFRGP 60


>AY316682-1|AAQ83696.1|  456|Tribolium castaneum Sp-like zinc finger
           protein protein.
          Length = 456

 Score = 21.8 bits (44), Expect = 5.1
 Identities = 8/14 (57%), Positives = 9/14 (64%)
 Frame = +1

Query: 454 GCHQTGFSPSPRRG 495
           G H TG +PSP  G
Sbjct: 255 GLHATGSAPSPTAG 268


>AM292361-1|CAL23173.2|  373|Tribolium castaneum gustatory receptor
           candidate 40 protein.
          Length = 373

 Score = 21.8 bits (44), Expect = 5.1
 Identities = 8/24 (33%), Positives = 14/24 (58%)
 Frame = +1

Query: 31  FKYNQRCLFYHSCWVTGPAFVTTT 102
           F +  + +FY    ++G  F+TTT
Sbjct: 224 FSWYSKKVFYSKIIISGSIFMTTT 247


>AJ845189-1|CAH60166.1|  515|Tribolium castaneum putative esterase
           protein.
          Length = 515

 Score = 21.4 bits (43), Expect = 6.7
 Identities = 9/30 (30%), Positives = 17/30 (56%)
 Frame = +3

Query: 552 VRKEIKDQSEGTQDAENK*GGFAMVHFNLF 641
           V K+I+D   G  ++EN    F ++H + +
Sbjct: 347 VAKKIRDFYYGGPNSENNLDNFYLIHTDTY 376


>AJ845188-1|CAH60165.1|  517|Tribolium castaneum putative esterase
           protein.
          Length = 517

 Score = 21.4 bits (43), Expect = 6.7
 Identities = 9/30 (30%), Positives = 17/30 (56%)
 Frame = +3

Query: 552 VRKEIKDQSEGTQDAENK*GGFAMVHFNLF 641
           V K+I+D   G  ++EN    F ++H + +
Sbjct: 349 VAKKIRDFYYGGPNSENNLDNFYLIHTDTY 378


>DQ414248-1|ABD63010.2|  311|Tribolium castaneum sloppy-paired
           protein.
          Length = 311

 Score = 21.0 bits (42), Expect = 8.9
 Identities = 11/32 (34%), Positives = 16/32 (50%)
 Frame = +3

Query: 51  SLLPFVLGDWPRVRHNHWPSRLVDQDFGLALT 146
           S+LP    + P+   NH  + L D D  L +T
Sbjct: 27  SILPETALEAPKSPENHPETELSDSDCDLDVT 58


>AM292372-1|CAL23184.2|  771|Tribolium castaneum gustatory receptor
           candidate 51 protein.
          Length = 771

 Score = 21.0 bits (42), Expect = 8.9
 Identities = 9/26 (34%), Positives = 12/26 (46%)
 Frame = +3

Query: 3   NFSLRFTIPIQIQPKMSLLPFVLGDW 80
           N SL   IPI +      + F+ G W
Sbjct: 282 NMSLLTVIPIHVWTSKEKISFLRGFW 307


>AF356647-1|AAK43700.1| 1156|Tribolium castaneum teashirt-like
           protein protein.
          Length = 1156

 Score = 21.0 bits (42), Expect = 8.9
 Identities = 9/12 (75%), Positives = 9/12 (75%)
 Frame = +2

Query: 491 EEGTRRRQGREK 526
           E G RRRQ REK
Sbjct: 583 ESGGRRRQTREK 594


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 154,651
Number of Sequences: 336
Number of extensions: 3511
Number of successful extensions: 13
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 13
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 13
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 16865010
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)