Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= brS-1133
         (717 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EF592539-1|ABQ95985.1|  630|Tribolium castaneum beta-N-acetylglu...    25   0.46 
AJ005422-1|CAA06528.1|  287|Tribolium castaneum caudal protein p...    22   5.7  
AJ005421-1|CAA06527.1|  249|Tribolium castaneum caudal protein p...    22   5.7  
EF633444-1|ABR32189.1|  721|Tribolium castaneum heat shock prote...    21   7.6  
AM292336-1|CAL23148.2|  455|Tribolium castaneum gustatory recept...    21   7.6  

>EF592539-1|ABQ95985.1|  630|Tribolium castaneum
          beta-N-acetylglucosaminidase FDL protein.
          Length = 630

 Score = 25.4 bits (53), Expect = 0.46
 Identities = 8/17 (47%), Positives = 13/17 (76%)
 Frame = +2

Query: 5  ILYFFVFCCVEYKIKLF 55
          +L+FF FCC+ + I L+
Sbjct: 9  VLFFFSFCCILFFIYLY 25


>AJ005422-1|CAA06528.1|  287|Tribolium castaneum caudal protein
           protein.
          Length = 287

 Score = 21.8 bits (44), Expect = 5.7
 Identities = 7/19 (36%), Positives = 13/19 (68%)
 Frame = -3

Query: 220 KMW*KTNRPPPHTVWSLND 164
           +MW   +  PPH+V++ N+
Sbjct: 48  QMWHHHSHMPPHSVFAANN 66


>AJ005421-1|CAA06527.1|  249|Tribolium castaneum caudal protein
           protein.
          Length = 249

 Score = 21.8 bits (44), Expect = 5.7
 Identities = 7/19 (36%), Positives = 13/19 (68%)
 Frame = -3

Query: 220 KMW*KTNRPPPHTVWSLND 164
           +MW   +  PPH+V++ N+
Sbjct: 48  QMWHHHSHMPPHSVFAANN 66


>EF633444-1|ABR32189.1|  721|Tribolium castaneum heat shock protein
           90 protein.
          Length = 721

 Score = 21.4 bits (43), Expect = 7.6
 Identities = 8/23 (34%), Positives = 14/23 (60%)
 Frame = -2

Query: 230 KICKNVVEDKQASTPYCMVSQRY 162
           K+ K VV ++   +P C+  +RY
Sbjct: 571 KVEKVVVSNRLVESPCCITMRRY 593


>AM292336-1|CAL23148.2|  455|Tribolium castaneum gustatory receptor
           candidate 15 protein.
          Length = 455

 Score = 21.4 bits (43), Expect = 7.6
 Identities = 9/27 (33%), Positives = 19/27 (70%)
 Frame = -2

Query: 344 VVTKVVLQILLKCLLSVKNFMHKQLIK 264
           +V+ VVL+IL++     KNF+++  ++
Sbjct: 165 IVSNVVLKILVEKYRHQKNFINESNVE 191


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 176,885
Number of Sequences: 336
Number of extensions: 3909
Number of successful extensions: 9
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 19051215
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)