Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= brS-1133
(717 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_8484| Best HMM Match : Heme_oxygenase (HMM E-Value=0) 70 2e-12
SB_35244| Best HMM Match : Ldl_recept_b (HMM E-Value=3.2e-11) 29 2.8
SB_2330| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.8
SB_52524| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 5.0
SB_48886| Best HMM Match : 4F5 (HMM E-Value=0.037) 29 5.0
SB_39025| Best HMM Match : DNA_pol_B_2 (HMM E-Value=6.2) 29 5.0
SB_9492| Best HMM Match : Rho_N (HMM E-Value=2.1e-12) 29 5.0
SB_56989| Best HMM Match : DUF1103 (HMM E-Value=2.4) 28 6.6
SB_55600| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 6.6
SB_24442| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 6.6
SB_34401| Best HMM Match : Pkinase_Tyr (HMM E-Value=0) 28 8.7
SB_33960| Best HMM Match : Borrelia_orfA (HMM E-Value=2) 28 8.7
SB_20656| Best HMM Match : DNA_pol_B_2 (HMM E-Value=5.3) 28 8.7
SB_15820| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 8.7
SB_9405| Best HMM Match : DNA_pol_B_2 (HMM E-Value=0.00011) 28 8.7
SB_9274| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 8.7
SB_7413| Best HMM Match : ATP_bind_1 (HMM E-Value=0) 28 8.7
SB_2134| Best HMM Match : Endonuclease_7 (HMM E-Value=0.057) 28 8.7
SB_56692| Best HMM Match : DNA_pol_B_2 (HMM E-Value=1e-04) 28 8.7
SB_42326| Best HMM Match : DNA_pol_B_2 (HMM E-Value=0.00028) 28 8.7
SB_38170| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 8.7
SB_31660| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 8.7
SB_31526| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 8.7
SB_15052| Best HMM Match : Pox_A32 (HMM E-Value=0.0023) 28 8.7
SB_13027| Best HMM Match : DNA_pol_B_2 (HMM E-Value=5.4) 28 8.7
SB_11065| Best HMM Match : WD40 (HMM E-Value=1.7e-35) 28 8.7
>SB_8484| Best HMM Match : Heme_oxygenase (HMM E-Value=0)
Length = 820
Score = 70.1 bits (164), Expect = 2e-12
Identities = 47/174 (27%), Positives = 88/174 (50%), Gaps = 3/174 (1%)
Frame = +3
Query: 99 MRKATRKIHSVSDALVNAKFAISLRDHTVWGGGLFV-FYHIFAYLED-AKERLNMPEFNK 272
++K T+ +H ++ + K R + W L Y++++ LE+ +++ + P F
Sbjct: 522 LKKGTKVVHRAAENVHFVKEFARGRIESYWYRVLLADLYYVYSVLEEESRKHKDHPCFGP 581
Query: 273 LFVHEILYRKKAFEQDLQHYLGDNWRS-IPKSLALENYLQHLQDLERDNPKLLMAYVYHL 449
+ E L R ++ ++DL Y G++W I S A + Y+ L+ + ++P+LL+ + Y
Sbjct: 582 IHFPEKLERTESIKEDLAFYYGEDWEEQIKLSDATKEYVDRLKAISAEDPRLLIPHHYTR 641
Query: 450 YLGLLSGGQILSKKRRVFGEKNEQPNTYVDKVTDLAAVDISKLKNEFREAMNQI 611
YLG LSGG IL KK V K + V T + + KN +R ++++
Sbjct: 642 YLGDLSGGAIL-KKMAVKAMKLPETGEGVKFFTFDKVANAKEFKNHYRSRLDKL 694
>SB_35244| Best HMM Match : Ldl_recept_b (HMM E-Value=3.2e-11)
Length = 534
Score = 29.5 bits (63), Expect = 2.8
Identities = 17/52 (32%), Positives = 29/52 (55%)
Frame = -2
Query: 344 VVTKVVLQILLKCLLSVKNFMHKQLIKFWHI*SLFCIFKICKNVVEDKQAST 189
++T +++Q+L + LLS M KQL+ FW L+ F+I + + D T
Sbjct: 42 IITTIIIQVLTRFLLSSDMHMDKQLL-FWS--ELYPEFRIRRMNLTDGSVQT 90
>SB_2330| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 571
Score = 29.1 bits (62), Expect = 3.8
Identities = 11/27 (40%), Positives = 21/27 (77%)
Frame = +1
Query: 118 KYILSAMPWSMRSLRYR*ETIQYGVEA 198
+Y + A+ +SM++L+Y +T+QY V+A
Sbjct: 5 QYSVKALEYSMKALQYSMKTLQYSVKA 31
>SB_52524| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 481
Score = 28.7 bits (61), Expect = 5.0
Identities = 11/24 (45%), Positives = 14/24 (58%)
Frame = +3
Query: 321 LQHYLGDNWRSIPKSLALENYLQH 392
L +L D W +P +L L NYL H
Sbjct: 334 LYSHLQDGWSQVPDALTLVNYLVH 357
>SB_48886| Best HMM Match : 4F5 (HMM E-Value=0.037)
Length = 476
Score = 28.7 bits (61), Expect = 5.0
Identities = 11/24 (45%), Positives = 14/24 (58%)
Frame = +3
Query: 321 LQHYLGDNWRSIPKSLALENYLQH 392
L +L D W +P +L L NYL H
Sbjct: 180 LYSHLQDGWSQVPDALTLVNYLVH 203
>SB_39025| Best HMM Match : DNA_pol_B_2 (HMM E-Value=6.2)
Length = 478
Score = 28.7 bits (61), Expect = 5.0
Identities = 22/93 (23%), Positives = 42/93 (45%)
Frame = +3
Query: 327 HYLGDNWRSIPKSLALENYLQHLQDLERDNPKLLMAYVYHLYLGLLSGGQILSKKRRVFG 506
H L +++ P+S+ L N + + +L ++ LY+ G ++ R V
Sbjct: 155 HDLHNDYPLAPESIGLSNVDKLVPNLNDKTKYVIHHETLRLYVSF--GLKVTKIHRGVTF 212
Query: 507 EKNEQPNTYVDKVTDLAAVDISKLKNEFREAMN 605
E++ Y+D TDL A + + +F + MN
Sbjct: 213 EESAWLEPYIDLNTDLRAKATNDFEKDFFKLMN 245
>SB_9492| Best HMM Match : Rho_N (HMM E-Value=2.1e-12)
Length = 1970
Score = 28.7 bits (61), Expect = 5.0
Identities = 22/92 (23%), Positives = 41/92 (44%)
Frame = +3
Query: 330 YLGDNWRSIPKSLALENYLQHLQDLERDNPKLLMAYVYHLYLGLLSGGQILSKKRRVFGE 509
++GD S P+S+ L + + +L ++ LY+ G ++ R V E
Sbjct: 1048 WMGDQELSAPESIGLGKVDKLVPNLNDKTKYVIHHETLRLYVSF--GLKVTKIHRGVTFE 1105
Query: 510 KNEQPNTYVDKVTDLAAVDISKLKNEFREAMN 605
++ Y+D TDL A + + +F + MN
Sbjct: 1106 ESAWLEPYIDLNTDLRAKATNDFEKDFFKLMN 1137
>SB_56989| Best HMM Match : DUF1103 (HMM E-Value=2.4)
Length = 835
Score = 28.3 bits (60), Expect = 6.6
Identities = 22/93 (23%), Positives = 42/93 (45%)
Frame = +3
Query: 327 HYLGDNWRSIPKSLALENYLQHLQDLERDNPKLLMAYVYHLYLGLLSGGQILSKKRRVFG 506
H L +++ P+S+ L N + + +L ++ LY+ G ++ R V
Sbjct: 140 HDLHNDYPLAPESIGLGNVDKLVPNLNDKTKYVIHRETLRLYVSF--GLKVTKIHRGVTF 197
Query: 507 EKNEQPNTYVDKVTDLAAVDISKLKNEFREAMN 605
E++ Y+D TDL A + + +F + MN
Sbjct: 198 EESAWLEPYIDLNTDLRAKATNDFEKDFFKLMN 230
>SB_55600| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 971
Score = 28.3 bits (60), Expect = 6.6
Identities = 22/93 (23%), Positives = 42/93 (45%)
Frame = +3
Query: 327 HYLGDNWRSIPKSLALENYLQHLQDLERDNPKLLMAYVYHLYLGLLSGGQILSKKRRVFG 506
H L +++ P+S+ L N + + +L ++ LY+ G ++ R V
Sbjct: 876 HDLHNDYPLAPESIGLGNVDKLVPNLNDKTKYVIHRETLRLYVSF--GLKVTKIHRGVTF 933
Query: 507 EKNEQPNTYVDKVTDLAAVDISKLKNEFREAMN 605
E++ Y+D TDL A + + +F + MN
Sbjct: 934 EESAWLEPYIDLNTDLRAKATNDFEKDFFKLMN 966
>SB_24442| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 673
Score = 28.3 bits (60), Expect = 6.6
Identities = 13/50 (26%), Positives = 26/50 (52%)
Frame = -2
Query: 236 IFKICKNVVEDKQASTPYCMVSQRYRKLRIDQGIADRMYFPSRFSHACRE 87
+FK C + E K P C++ R+ + +++ A R+ S SH+ ++
Sbjct: 179 VFKTCTVLSEKKSRKLPRCLI--RHHSMNLEKKCATRVTSESLDSHSSKD 226
>SB_34401| Best HMM Match : Pkinase_Tyr (HMM E-Value=0)
Length = 2629
Score = 27.9 bits (59), Expect = 8.7
Identities = 22/93 (23%), Positives = 42/93 (45%)
Frame = +3
Query: 327 HYLGDNWRSIPKSLALENYLQHLQDLERDNPKLLMAYVYHLYLGLLSGGQILSKKRRVFG 506
H L +++ P+S+ L N + + +L ++ LY+ G ++ R V
Sbjct: 1394 HDLHNDYPLAPESIGLGNVDKLVPNLNDKTKYVIHHETLRLYVSF--GLKVTKIHRGVTF 1451
Query: 507 EKNEQPNTYVDKVTDLAAVDISKLKNEFREAMN 605
E++ Y+D TDL A + + +F + MN
Sbjct: 1452 EESAWLEPYIDLNTDLRAKATNDFEKDFFKLMN 1484
>SB_33960| Best HMM Match : Borrelia_orfA (HMM E-Value=2)
Length = 662
Score = 27.9 bits (59), Expect = 8.7
Identities = 22/93 (23%), Positives = 42/93 (45%)
Frame = +3
Query: 327 HYLGDNWRSIPKSLALENYLQHLQDLERDNPKLLMAYVYHLYLGLLSGGQILSKKRRVFG 506
H L +++ P+S+ L N + + +L ++ LY+ G ++ R V
Sbjct: 64 HDLHNDYPLAPESIGLGNVDKLVPNLNDKTKYVIHHETLRLYVSF--GLKVTKIHRGVTF 121
Query: 507 EKNEQPNTYVDKVTDLAAVDISKLKNEFREAMN 605
E++ Y+D TDL A + + +F + MN
Sbjct: 122 EESAWLEPYIDLNTDLRAKATNDFEKDFFKLMN 154
>SB_20656| Best HMM Match : DNA_pol_B_2 (HMM E-Value=5.3)
Length = 379
Score = 27.9 bits (59), Expect = 8.7
Identities = 22/93 (23%), Positives = 42/93 (45%)
Frame = +3
Query: 327 HYLGDNWRSIPKSLALENYLQHLQDLERDNPKLLMAYVYHLYLGLLSGGQILSKKRRVFG 506
H L +++ P+S+ L N + + +L ++ LY+ G ++ R V
Sbjct: 155 HDLHNDYPLAPESIGLGNVDKLVPNLNDKTKYVIHHETLRLYVSF--GLKVTKIHRGVTF 212
Query: 507 EKNEQPNTYVDKVTDLAAVDISKLKNEFREAMN 605
E++ Y+D TDL A + + +F + MN
Sbjct: 213 EESAWLEPYIDLNTDLRAKATNDFEKDFFKLMN 245
>SB_15820| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1998
Score = 27.9 bits (59), Expect = 8.7
Identities = 22/93 (23%), Positives = 42/93 (45%)
Frame = +3
Query: 327 HYLGDNWRSIPKSLALENYLQHLQDLERDNPKLLMAYVYHLYLGLLSGGQILSKKRRVFG 506
H L +++ P+S+ L N + + +L ++ LY+ G ++ R V
Sbjct: 1026 HDLHNDYPLAPESIGLGNVDKLVPNLNDKTKYVIHHETLRLYVSF--GLKVTKIHRGVTF 1083
Query: 507 EKNEQPNTYVDKVTDLAAVDISKLKNEFREAMN 605
E++ Y+D TDL A + + +F + MN
Sbjct: 1084 EESAWLEPYIDLNTDLRAKATNDFEKDFFKLMN 1116
>SB_9405| Best HMM Match : DNA_pol_B_2 (HMM E-Value=0.00011)
Length = 1092
Score = 27.9 bits (59), Expect = 8.7
Identities = 22/93 (23%), Positives = 42/93 (45%)
Frame = +3
Query: 327 HYLGDNWRSIPKSLALENYLQHLQDLERDNPKLLMAYVYHLYLGLLSGGQILSKKRRVFG 506
H L +++ P+S+ L N + + +L ++ LY+ G ++ R V
Sbjct: 885 HDLHNDYPLAPESIGLGNVDKLVPNLNDKTKYVIHHETLRLYVSF--GLKVTKIHRGVTF 942
Query: 507 EKNEQPNTYVDKVTDLAAVDISKLKNEFREAMN 605
E++ Y+D TDL A + + +F + MN
Sbjct: 943 EESAWLEPYIDLNTDLRAKATNDFEKDFFKLMN 975
>SB_9274| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1230
Score = 27.9 bits (59), Expect = 8.7
Identities = 9/21 (42%), Positives = 14/21 (66%)
Frame = +3
Query: 153 KFAISLRDHTVWGGGLFVFYH 215
K + + +H +WG GLFV +H
Sbjct: 289 KDCLFVSNHAIWGAGLFVEFH 309
>SB_7413| Best HMM Match : ATP_bind_1 (HMM E-Value=0)
Length = 299
Score = 27.9 bits (59), Expect = 8.7
Identities = 27/105 (25%), Positives = 42/105 (40%), Gaps = 2/105 (1%)
Frame = +3
Query: 90 TTRMRKATRKIHSVSDALVNAKFAISLRDHTVWGGGLFVFYHIFAYLEDAKERLNMPEFN 269
TT M TR + V D + + T G G+ F ED ER PE+
Sbjct: 142 TTYMSSLTRSMSLVLDEFYQNLDCVGVSSMT--GAGIDEFLLAVGRAEDEYEREYKPEYE 199
Query: 270 KLFVHEILYRKKAFEQDLQHYLGD--NWRSIPKSLALENYLQHLQ 398
KL ++ +K + ++ D +S+P + A E L H +
Sbjct: 200 KLKKEKLQKEEKEKTEQMEKLKKDLGEGQSVPLT-ATEQALLHTE 243
>SB_2134| Best HMM Match : Endonuclease_7 (HMM E-Value=0.057)
Length = 1124
Score = 27.9 bits (59), Expect = 8.7
Identities = 22/93 (23%), Positives = 42/93 (45%)
Frame = +3
Query: 327 HYLGDNWRSIPKSLALENYLQHLQDLERDNPKLLMAYVYHLYLGLLSGGQILSKKRRVFG 506
H L +++ P+S+ L N + + +L ++ LY+ G ++ R V
Sbjct: 349 HDLHNDYPLAPESIGLGNVDKLVPNLNDKTKYVIHHETLRLYVSF--GLKVTKIHRGVTF 406
Query: 507 EKNEQPNTYVDKVTDLAAVDISKLKNEFREAMN 605
E++ Y+D TDL A + + +F + MN
Sbjct: 407 EESAWLEPYIDLNTDLRAKATNDFEKDFFKLMN 439
>SB_56692| Best HMM Match : DNA_pol_B_2 (HMM E-Value=1e-04)
Length = 963
Score = 27.9 bits (59), Expect = 8.7
Identities = 22/93 (23%), Positives = 42/93 (45%)
Frame = +3
Query: 327 HYLGDNWRSIPKSLALENYLQHLQDLERDNPKLLMAYVYHLYLGLLSGGQILSKKRRVFG 506
H L +++ P+S+ L N + + +L ++ LY+ G ++ R V
Sbjct: 606 HDLHNDYPLAPESIGLGNVDKLVPNLNDKTKYVIHHETLRLYVSF--GLKVTKIHRGVTF 663
Query: 507 EKNEQPNTYVDKVTDLAAVDISKLKNEFREAMN 605
E++ Y+D TDL A + + +F + MN
Sbjct: 664 EESAWLEPYIDLNTDLRAKATNDFEKDFFKLMN 696
>SB_42326| Best HMM Match : DNA_pol_B_2 (HMM E-Value=0.00028)
Length = 577
Score = 27.9 bits (59), Expect = 8.7
Identities = 22/93 (23%), Positives = 42/93 (45%)
Frame = +3
Query: 327 HYLGDNWRSIPKSLALENYLQHLQDLERDNPKLLMAYVYHLYLGLLSGGQILSKKRRVFG 506
H L +++ P+S+ L N + + +L ++ LY+ G ++ R V
Sbjct: 368 HDLHNDYPLAPESIGLGNVDKLVPNLNDKTKYVIHHETLRLYVSF--GLKVTKIHRGVTF 425
Query: 507 EKNEQPNTYVDKVTDLAAVDISKLKNEFREAMN 605
E++ Y+D TDL A + + +F + MN
Sbjct: 426 EESAWLGPYIDLNTDLRAKATNDFEKDFFKLMN 458
>SB_38170| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 210
Score = 27.9 bits (59), Expect = 8.7
Identities = 22/93 (23%), Positives = 42/93 (45%)
Frame = +3
Query: 327 HYLGDNWRSIPKSLALENYLQHLQDLERDNPKLLMAYVYHLYLGLLSGGQILSKKRRVFG 506
H L +++ P+S+ L N + + +L ++ LY+ G ++ R V
Sbjct: 115 HDLHNDYPLAPESIGLGNVDKLVPNLNDKTKYVIHHETLRLYVSF--GLKVTKIHRGVTF 172
Query: 507 EKNEQPNTYVDKVTDLAAVDISKLKNEFREAMN 605
E++ Y+D TDL A + + +F + MN
Sbjct: 173 EESAWLEPYIDLNTDLRAKATNDFEKDFFKLMN 205
>SB_31660| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1185
Score = 27.9 bits (59), Expect = 8.7
Identities = 22/93 (23%), Positives = 42/93 (45%)
Frame = +3
Query: 327 HYLGDNWRSIPKSLALENYLQHLQDLERDNPKLLMAYVYHLYLGLLSGGQILSKKRRVFG 506
H L +++ P+S+ L N + + +L ++ LY+ G ++ R V
Sbjct: 960 HDLHNDYPLAPESIGLGNVDKLVPNLNDKTKYVIHHETLRLYVSF--GLKVTKIHRGVTF 1017
Query: 507 EKNEQPNTYVDKVTDLAAVDISKLKNEFREAMN 605
E++ Y+D TDL A + + +F + MN
Sbjct: 1018 EESAWLEPYIDLNTDLRAKATNDFEKDFFKLMN 1050
>SB_31526| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1248
Score = 27.9 bits (59), Expect = 8.7
Identities = 22/93 (23%), Positives = 42/93 (45%)
Frame = +3
Query: 327 HYLGDNWRSIPKSLALENYLQHLQDLERDNPKLLMAYVYHLYLGLLSGGQILSKKRRVFG 506
H L +++ P+S+ L N + + +L ++ LY+ G ++ R V
Sbjct: 951 HDLHNDYPLAPESIGLGNVDKLVPNLNDKTKYVIHHETLRLYVSF--GLKVTKIHRGVTF 1008
Query: 507 EKNEQPNTYVDKVTDLAAVDISKLKNEFREAMN 605
E++ Y+D TDL A + + +F + MN
Sbjct: 1009 EESAWLEPYIDLNTDLRAKATNDFEKDFFKLMN 1041
>SB_15052| Best HMM Match : Pox_A32 (HMM E-Value=0.0023)
Length = 1901
Score = 27.9 bits (59), Expect = 8.7
Identities = 22/93 (23%), Positives = 42/93 (45%)
Frame = +3
Query: 327 HYLGDNWRSIPKSLALENYLQHLQDLERDNPKLLMAYVYHLYLGLLSGGQILSKKRRVFG 506
H L +++ P+S+ L N + + +L ++ LY+ G ++ R V
Sbjct: 224 HDLHNDYPLAPESIGLGNVDKLVPNLNDKTKYVIHHETLRLYVSF--GLKVTKIHRGVTF 281
Query: 507 EKNEQPNTYVDKVTDLAAVDISKLKNEFREAMN 605
E++ Y+D TDL A + + +F + MN
Sbjct: 282 EESAWLEPYIDLNTDLRAKATNDFEKDFFKLMN 314
Score = 27.9 bits (59), Expect = 8.7
Identities = 22/93 (23%), Positives = 42/93 (45%)
Frame = +3
Query: 327 HYLGDNWRSIPKSLALENYLQHLQDLERDNPKLLMAYVYHLYLGLLSGGQILSKKRRVFG 506
H L +++ P+S+ L N + + +L ++ LY+ G ++ R V
Sbjct: 823 HDLHNDYPLAPESIGLGNVDKLVPNLNDKTKYVIHHETLRLYVSF--GLKVTKIHRGVTF 880
Query: 507 EKNEQPNTYVDKVTDLAAVDISKLKNEFREAMN 605
E++ Y+D TDL A + + +F + MN
Sbjct: 881 EESAWLEPYIDLNTDLRAKATNDFEKDFFKLMN 913
>SB_13027| Best HMM Match : DNA_pol_B_2 (HMM E-Value=5.4)
Length = 398
Score = 27.9 bits (59), Expect = 8.7
Identities = 22/93 (23%), Positives = 42/93 (45%)
Frame = +3
Query: 327 HYLGDNWRSIPKSLALENYLQHLQDLERDNPKLLMAYVYHLYLGLLSGGQILSKKRRVFG 506
H L +++ P+S+ L N + + +L ++ LY+ G ++ R V
Sbjct: 155 HDLHNDYPLAPESIGLGNVDKLVPNLNDKTKYVIHHETLRLYVSF--GLKVTKIHRGVTF 212
Query: 507 EKNEQPNTYVDKVTDLAAVDISKLKNEFREAMN 605
E++ Y+D TDL A + + +F + MN
Sbjct: 213 EESAWLGPYIDLNTDLRAKATNDFEKDFFKLMN 245
>SB_11065| Best HMM Match : WD40 (HMM E-Value=1.7e-35)
Length = 702
Score = 27.9 bits (59), Expect = 8.7
Identities = 14/54 (25%), Positives = 29/54 (53%), Gaps = 2/54 (3%)
Frame = +3
Query: 135 DALVNAKFAISLRDH-TVWGGGLFVFYHI-FAYLEDAKERLNMPEFNKLFVHEI 290
D++V+ +A+ +W GG+ +I Y +D+K + + E ++L HE+
Sbjct: 341 DSIVHLNWAVKNEQRKAIWLGGIMSLSYITLEYAKDSKFPIKITEAHRLKYHEV 394
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 22,763,676
Number of Sequences: 59808
Number of extensions: 465866
Number of successful extensions: 1156
Number of sequences better than 10.0: 26
Number of HSP's better than 10.0 without gapping: 1087
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1155
length of database: 16,821,457
effective HSP length: 80
effective length of database: 12,036,817
effective search space used: 1901817086
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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