Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= brS-1133
         (717 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY061087-1|AAL28635.1|  296|Drosophila melanogaster LD07651p pro...   111   9e-25
AE014297-1356|AAF54680.1|  296|Drosophila melanogaster CG14716-P...   111   9e-25
AY089301-1|AAL90039.1|  349|Drosophila melanogaster AT09986p pro...    30   2.7  
AE014134-795|AAF50964.1|  349|Drosophila melanogaster CG15625-PA...    30   2.7  
AY089237-1|AAL89975.1|  399|Drosophila melanogaster AT02704p pro...    29   4.8  
AE014298-2716|AAF48836.2|  399|Drosophila melanogaster CG15056-P...    29   4.8  
AE014298-2653|AAF48791.2| 1108|Drosophila melanogaster CG15373-P...    29   8.4  

>AY061087-1|AAL28635.1|  296|Drosophila melanogaster LD07651p
           protein.
          Length = 296

 Score =  111 bits (267), Expect = 9e-25
 Identities = 56/139 (40%), Positives = 85/139 (61%), Gaps = 1/139 (0%)
 Frame = +3

Query: 87  FTTRMRKATRKIHSVSDALVNAKFAISLRDHTVWGGGLFVFYHIFAYLEDAKERLNMPEF 266
           FT  +RKAT+ +H+++D LVNAK A++L D  VW  GL  FY ++ + E      ++PE 
Sbjct: 27  FTKELRKATKDVHNLTDVLVNAKIALALSDDEVWYDGLLAFYELYKFFE-----THLPE- 80

Query: 267 NKLFVHEILYRKKAFEQDLQHYLGDNWR-SIPKSLALENYLQHLQDLERDNPKLLMAYVY 443
            +L   E  +R  AFE+D  ++ G +WR       A++ YL+HL+ +   N  LL AY Y
Sbjct: 81  -RLLPKE-FHRTAAFERDFAYFYGSDWRKDYEIRPAVQKYLEHLEKIAAQNELLLFAYSY 138

Query: 444 HLYLGLLSGGQILSKKRRV 500
            +Y+ L+SGGQ+L KKR +
Sbjct: 139 QMYMALMSGGQMLQKKRMI 157


>AE014297-1356|AAF54680.1|  296|Drosophila melanogaster CG14716-PA
           protein.
          Length = 296

 Score =  111 bits (267), Expect = 9e-25
 Identities = 56/139 (40%), Positives = 85/139 (61%), Gaps = 1/139 (0%)
 Frame = +3

Query: 87  FTTRMRKATRKIHSVSDALVNAKFAISLRDHTVWGGGLFVFYHIFAYLEDAKERLNMPEF 266
           FT  +RKAT+ +H+++D LVNAK A++L D  VW  GL  FY ++ + E      ++PE 
Sbjct: 27  FTKELRKATKDVHNLTDVLVNAKIALALSDDEVWYDGLLAFYELYKFFE-----THLPE- 80

Query: 267 NKLFVHEILYRKKAFEQDLQHYLGDNWR-SIPKSLALENYLQHLQDLERDNPKLLMAYVY 443
            +L   E  +R  AFE+D  ++ G +WR       A++ YL+HL+ +   N  LL AY Y
Sbjct: 81  -RLLPKE-FHRTAAFERDFAYFYGSDWRKDYEIRPAVQKYLEHLEKIAAQNELLLFAYSY 138

Query: 444 HLYLGLLSGGQILSKKRRV 500
            +Y+ L+SGGQ+L KKR +
Sbjct: 139 QMYMALMSGGQMLQKKRMI 157


>AY089301-1|AAL90039.1|  349|Drosophila melanogaster AT09986p
           protein.
          Length = 349

 Score = 30.3 bits (65), Expect = 2.7
 Identities = 13/38 (34%), Positives = 17/38 (44%)
 Frame = +2

Query: 101 EKSDSENTFCQRCLGQCEVCDIVERPYSMGWRPVCLLP 214
           E  + E   C  C+  C+ CD   R   + WR  CL P
Sbjct: 239 EDMEPEELMCMTCIPPCD-CDWTARDLRLPWRLECLPP 275


>AE014134-795|AAF50964.1|  349|Drosophila melanogaster CG15625-PA
           protein.
          Length = 349

 Score = 30.3 bits (65), Expect = 2.7
 Identities = 13/38 (34%), Positives = 17/38 (44%)
 Frame = +2

Query: 101 EKSDSENTFCQRCLGQCEVCDIVERPYSMGWRPVCLLP 214
           E  + E   C  C+  C+ CD   R   + WR  CL P
Sbjct: 239 EDMEPEELMCMTCIPPCD-CDWTARDLRLPWRLECLPP 275


>AY089237-1|AAL89975.1|  399|Drosophila melanogaster AT02704p
           protein.
          Length = 399

 Score = 29.5 bits (63), Expect = 4.8
 Identities = 14/27 (51%), Positives = 18/27 (66%)
 Frame = -3

Query: 541 LSTYVFGCSFFSPNTLLFLDKICPPLR 461
           LS Y+ GC    PN L+FL++I P LR
Sbjct: 181 LSLYITGCRNLCPNQLIFLNRI-PRLR 206


>AE014298-2716|AAF48836.2|  399|Drosophila melanogaster CG15056-PA
           protein.
          Length = 399

 Score = 29.5 bits (63), Expect = 4.8
 Identities = 14/27 (51%), Positives = 18/27 (66%)
 Frame = -3

Query: 541 LSTYVFGCSFFSPNTLLFLDKICPPLR 461
           LS Y+ GC    PN L+FL++I P LR
Sbjct: 181 LSLYITGCRNLCPNQLIFLNRI-PRLR 206


>AE014298-2653|AAF48791.2| 1108|Drosophila melanogaster CG15373-PA
           protein.
          Length = 1108

 Score = 28.7 bits (61), Expect = 8.4
 Identities = 14/38 (36%), Positives = 20/38 (52%)
 Frame = +3

Query: 552 LAAVDISKLKNEFREAMNQIATTMSFRGASHIHRGEQS 665
           L A D+ KLK E R  + Q     +++  SHI R  +S
Sbjct: 172 LIAADLVKLKTEMRVFLKQHLDEFTYKTMSHIERDMES 209


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 32,705,829
Number of Sequences: 53049
Number of extensions: 670206
Number of successful extensions: 1600
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 1547
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1596
length of database: 24,988,368
effective HSP length: 83
effective length of database: 20,585,301
effective search space used: 3190721655
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)