BLASTX 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= brS-1133 (717 letters) Database: fruitfly 53,049 sequences; 24,988,368 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value AY061087-1|AAL28635.1| 296|Drosophila melanogaster LD07651p pro... 111 9e-25 AE014297-1356|AAF54680.1| 296|Drosophila melanogaster CG14716-P... 111 9e-25 AY089301-1|AAL90039.1| 349|Drosophila melanogaster AT09986p pro... 30 2.7 AE014134-795|AAF50964.1| 349|Drosophila melanogaster CG15625-PA... 30 2.7 AY089237-1|AAL89975.1| 399|Drosophila melanogaster AT02704p pro... 29 4.8 AE014298-2716|AAF48836.2| 399|Drosophila melanogaster CG15056-P... 29 4.8 AE014298-2653|AAF48791.2| 1108|Drosophila melanogaster CG15373-P... 29 8.4 >AY061087-1|AAL28635.1| 296|Drosophila melanogaster LD07651p protein. Length = 296 Score = 111 bits (267), Expect = 9e-25 Identities = 56/139 (40%), Positives = 85/139 (61%), Gaps = 1/139 (0%) Frame = +3 Query: 87 FTTRMRKATRKIHSVSDALVNAKFAISLRDHTVWGGGLFVFYHIFAYLEDAKERLNMPEF 266 FT +RKAT+ +H+++D LVNAK A++L D VW GL FY ++ + E ++PE Sbjct: 27 FTKELRKATKDVHNLTDVLVNAKIALALSDDEVWYDGLLAFYELYKFFE-----THLPE- 80 Query: 267 NKLFVHEILYRKKAFEQDLQHYLGDNWR-SIPKSLALENYLQHLQDLERDNPKLLMAYVY 443 +L E +R AFE+D ++ G +WR A++ YL+HL+ + N LL AY Y Sbjct: 81 -RLLPKE-FHRTAAFERDFAYFYGSDWRKDYEIRPAVQKYLEHLEKIAAQNELLLFAYSY 138 Query: 444 HLYLGLLSGGQILSKKRRV 500 +Y+ L+SGGQ+L KKR + Sbjct: 139 QMYMALMSGGQMLQKKRMI 157 >AE014297-1356|AAF54680.1| 296|Drosophila melanogaster CG14716-PA protein. Length = 296 Score = 111 bits (267), Expect = 9e-25 Identities = 56/139 (40%), Positives = 85/139 (61%), Gaps = 1/139 (0%) Frame = +3 Query: 87 FTTRMRKATRKIHSVSDALVNAKFAISLRDHTVWGGGLFVFYHIFAYLEDAKERLNMPEF 266 FT +RKAT+ +H+++D LVNAK A++L D VW GL FY ++ + E ++PE Sbjct: 27 FTKELRKATKDVHNLTDVLVNAKIALALSDDEVWYDGLLAFYELYKFFE-----THLPE- 80 Query: 267 NKLFVHEILYRKKAFEQDLQHYLGDNWR-SIPKSLALENYLQHLQDLERDNPKLLMAYVY 443 +L E +R AFE+D ++ G +WR A++ YL+HL+ + N LL AY Y Sbjct: 81 -RLLPKE-FHRTAAFERDFAYFYGSDWRKDYEIRPAVQKYLEHLEKIAAQNELLLFAYSY 138 Query: 444 HLYLGLLSGGQILSKKRRV 500 +Y+ L+SGGQ+L KKR + Sbjct: 139 QMYMALMSGGQMLQKKRMI 157 >AY089301-1|AAL90039.1| 349|Drosophila melanogaster AT09986p protein. Length = 349 Score = 30.3 bits (65), Expect = 2.7 Identities = 13/38 (34%), Positives = 17/38 (44%) Frame = +2 Query: 101 EKSDSENTFCQRCLGQCEVCDIVERPYSMGWRPVCLLP 214 E + E C C+ C+ CD R + WR CL P Sbjct: 239 EDMEPEELMCMTCIPPCD-CDWTARDLRLPWRLECLPP 275 >AE014134-795|AAF50964.1| 349|Drosophila melanogaster CG15625-PA protein. Length = 349 Score = 30.3 bits (65), Expect = 2.7 Identities = 13/38 (34%), Positives = 17/38 (44%) Frame = +2 Query: 101 EKSDSENTFCQRCLGQCEVCDIVERPYSMGWRPVCLLP 214 E + E C C+ C+ CD R + WR CL P Sbjct: 239 EDMEPEELMCMTCIPPCD-CDWTARDLRLPWRLECLPP 275 >AY089237-1|AAL89975.1| 399|Drosophila melanogaster AT02704p protein. Length = 399 Score = 29.5 bits (63), Expect = 4.8 Identities = 14/27 (51%), Positives = 18/27 (66%) Frame = -3 Query: 541 LSTYVFGCSFFSPNTLLFLDKICPPLR 461 LS Y+ GC PN L+FL++I P LR Sbjct: 181 LSLYITGCRNLCPNQLIFLNRI-PRLR 206 >AE014298-2716|AAF48836.2| 399|Drosophila melanogaster CG15056-PA protein. Length = 399 Score = 29.5 bits (63), Expect = 4.8 Identities = 14/27 (51%), Positives = 18/27 (66%) Frame = -3 Query: 541 LSTYVFGCSFFSPNTLLFLDKICPPLR 461 LS Y+ GC PN L+FL++I P LR Sbjct: 181 LSLYITGCRNLCPNQLIFLNRI-PRLR 206 >AE014298-2653|AAF48791.2| 1108|Drosophila melanogaster CG15373-PA protein. Length = 1108 Score = 28.7 bits (61), Expect = 8.4 Identities = 14/38 (36%), Positives = 20/38 (52%) Frame = +3 Query: 552 LAAVDISKLKNEFREAMNQIATTMSFRGASHIHRGEQS 665 L A D+ KLK E R + Q +++ SHI R +S Sbjct: 172 LIAADLVKLKTEMRVFLKQHLDEFTYKTMSHIERDMES 209 Database: fruitfly Posted date: Oct 23, 2007 1:17 PM Number of letters in database: 24,988,368 Number of sequences in database: 53,049 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 32,705,829 Number of Sequences: 53049 Number of extensions: 670206 Number of successful extensions: 1600 Number of sequences better than 10.0: 7 Number of HSP's better than 10.0 without gapping: 1547 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 1596 length of database: 24,988,368 effective HSP length: 83 effective length of database: 20,585,301 effective search space used: 3190721655 frameshift window, decay const: 40, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 41 (21.7 bits)
- SilkBase 1999-2023 -