Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= brS-1122
(710 letters)
Database: mosquito
2352 sequences; 563,979 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U03849-2|AAA53489.1| 1049|Anopheles gambiae putative reverse tra... 91 4e-20
M93689-2|AAA29367.1| 975|Anopheles gambiae protein ( Anopheles ... 86 1e-18
AB090819-2|BAC57914.1| 1022|Anopheles gambiae reverse transcript... 41 3e-05
AB090817-2|BAC57910.1| 1009|Anopheles gambiae reverse transcript... 37 5e-04
M93691-2|AAA29365.1| 1222|Anopheles gambiae protein ( Anopheles ... 34 0.004
AB090818-2|BAC57912.1| 988|Anopheles gambiae reverse transcript... 33 0.007
M93690-2|AAA29363.1| 1212|Anopheles gambiae unknown protein. 32 0.015
AB090815-2|BAC57906.1| 973|Anopheles gambiae reverse transcript... 31 0.027
AB090822-2|BAC57920.1| 1173|Anopheles gambiae reverse transcript... 31 0.047
AB090820-2|BAC57916.1| 1222|Anopheles gambiae reverse transcript... 30 0.082
AB090813-2|BAC57902.1| 1099|Anopheles gambiae reverse transcript... 29 0.14
AJ970250-1|CAI96722.1| 132|Anopheles gambiae putative reverse t... 29 0.19
AJ970247-1|CAI96719.1| 132|Anopheles gambiae putative reverse t... 29 0.19
AB090812-2|BAC57900.1| 1173|Anopheles gambiae reverse transcript... 29 0.19
AB090816-2|BAC57908.1| 1201|Anopheles gambiae reverse transcript... 28 0.33
AJ970248-1|CAI96720.1| 132|Anopheles gambiae putative reverse t... 26 1.0
AB090814-2|BAC57904.1| 1049|Anopheles gambiae reverse transcript... 26 1.0
AB090824-2|BAC57924.1| 1248|Anopheles gambiae reverse transcript... 26 1.3
AB090821-2|BAC57918.1| 1168|Anopheles gambiae reverse transcript... 26 1.3
AB090823-2|BAC57922.1| 1154|Anopheles gambiae reverse transcript... 25 2.3
AJ970245-1|CAI96717.1| 134|Anopheles gambiae putative reverse t... 25 3.1
AJ438610-4|CAD27476.1| 593|Anopheles gambiae putative transcrip... 24 4.1
AJ970251-1|CAI96723.1| 131|Anopheles gambiae putative reverse t... 24 5.4
AY062204-1|AAL58565.1| 150|Anopheles gambiae cytochrome P450 CY... 23 9.5
>U03849-2|AAA53489.1| 1049|Anopheles gambiae putative reverse
transcriptase protein.
Length = 1049
Score = 90.6 bits (215), Expect = 4e-20
Identities = 49/132 (37%), Positives = 71/132 (53%), Gaps = 3/132 (2%)
Frame = +2
Query: 215 FLNLYHATIIAPS---GFQAY*LERLKKNLTNRSSTVVAGGHSSMSFPVLSGVPQGSHLG 385
F +L HA ++A G + ++ LK L +R+ V H S SGVPQGS++G
Sbjct: 691 FDSLPHAILLAKLDKLGIPSPLVQWLKSYLIHRTYIVKIDKHMSKEIVSSSGVPQGSNIG 750
Query: 386 PLLFNAFINDIGSCFRSTKFYMFADDLKFFRKVNSSLDSELLQRDLDSLFGWCSANGMSL 565
PLLF FIND+ +FADD K F +N++ D LQ ++ WC NG+++
Sbjct: 751 PLLFILFINDVTLALPPDSISLFADDAKIFAPINNTGDCTFLQDCIEIFCSWCKRNGLTI 810
Query: 566 NISKCYVIRFTR 601
I KCY + F+R
Sbjct: 811 CIEKCYCVSFSR 822
>M93689-2|AAA29367.1| 975|Anopheles gambiae protein ( Anopheles
gambiae T1 retroposon. ).
Length = 975
Score = 85.8 bits (203), Expect = 1e-18
Identities = 52/131 (39%), Positives = 71/131 (54%), Gaps = 3/131 (2%)
Frame = +2
Query: 215 FLNLYHATIIAPS---GFQAY*LERLKKNLTNRSSTVVAGGHSSMSFPVLSGVPQGSHLG 385
F +L H+ ++A GF + L L+NRS V G + S F SGVPQG L
Sbjct: 620 FDSLPHSLLLAKLSKLGFGDGIISWLSSYLSNRSCRVKTGSYLSEEFFCTSGVPQGCVLS 679
Query: 386 PLLFNAFINDIGSCFRSTKFYMFADDLKFFRKVNSSLDSELLQRDLDSLFGWCSANGMSL 565
PLLF+ FIND+ + ++ADD+K F V+SS D LQ L++ WCS+N + L
Sbjct: 680 PLLFSLFINDVCNVLPPDGHLLYADDIKIFLPVSSSSDCMSLQHYLNAFVHWCSSNLLRL 739
Query: 566 NISKCYVIRFT 598
KC VI F+
Sbjct: 740 CPDKCSVISFS 750
>AB090819-2|BAC57914.1| 1022|Anopheles gambiae reverse transcriptase
protein.
Length = 1022
Score = 41.1 bits (92), Expect = 3e-05
Identities = 27/80 (33%), Positives = 42/80 (52%), Gaps = 4/80 (5%)
Frame = +2
Query: 350 VLSGVPQGSHLGPLLFNAFINDI-G-SCFRSTKFYMFADDLKFFRKVNSSLD--SELLQR 517
V +GVPQGS LGP L+N N++ G + + FADD+ V S +D ++
Sbjct: 606 VTAGVPQGSVLGPTLWNLMYNEVLGLTLYDGASLIGFADDIVLV-AVGSRIDDLENTIET 664
Query: 518 DLDSLFGWCSANGMSLNISK 577
++ + W + + LNISK
Sbjct: 665 SINIIRQWMESVELQLNISK 684
>AB090817-2|BAC57910.1| 1009|Anopheles gambiae reverse transcriptase
protein.
Length = 1009
Score = 37.1 bits (82), Expect = 5e-04
Identities = 24/79 (30%), Positives = 39/79 (49%), Gaps = 3/79 (3%)
Frame = +2
Query: 350 VLSGVPQGSHLGPLLFNAFINDI--GSCFRSTKFYMFADDLKFFRKVNSSLDSELL-QRD 520
V SGVPQGS LGP L+N + + + + +ADD+ + N D E+L
Sbjct: 601 VTSGVPQGSVLGPTLWNLMYDGVLRVAMVEGARIIGYADDIVLLVEGNCVDDIEILVSSQ 660
Query: 521 LDSLFGWCSANGMSLNISK 577
+ + W + NG+ + +K
Sbjct: 661 IRIIDRWMTDNGLKIAPTK 679
>M93691-2|AAA29365.1| 1222|Anopheles gambiae protein ( Anopheles
gambiae RT2 retroposon. ).
Length = 1222
Score = 34.3 bits (75), Expect = 0.004
Identities = 24/90 (26%), Positives = 41/90 (45%), Gaps = 3/90 (3%)
Frame = +2
Query: 350 VLSGVPQGSHLGPLLFNAFINDI--GSCFRSTKFYMFADDLKFFRKVNSSLDSEL-LQRD 520
V +GVPQGS LGP L+N + + + +ADDL ++ + +
Sbjct: 682 VTAGVPQGSILGPTLWNIMYDGVLDVPLPPDVEVIGYADDLALLVPATTTDEVRARAEEA 741
Query: 521 LDSLFGWCSANGMSLNISKCYVIRFTRKKT 610
+D + W +G+ L +K + + KKT
Sbjct: 742 VDQVQRWMQQHGLELAPAKTEAVLISSKKT 771
>AB090818-2|BAC57912.1| 988|Anopheles gambiae reverse transcriptase
protein.
Length = 988
Score = 33.5 bits (73), Expect = 0.007
Identities = 26/80 (32%), Positives = 37/80 (46%), Gaps = 4/80 (5%)
Frame = +2
Query: 338 MSFPVLSGVPQGSHLGPLLFNAFINDIGSC---FRSTKFYMFADDLKF-FRKVNSSLDSE 505
+S V +GVPQGS LGP L+N +D+ FADD+ F F + S
Sbjct: 613 VSRTVSAGVPQGSVLGPTLWNVMYDDLLRLPLEGLRADIIGFADDVAFTFLGRTTEQVSA 672
Query: 506 LLQRDLDSLFGWCSANGMSL 565
L +L+ + W G+ L
Sbjct: 673 LATANLERIERWLRGVGLEL 692
>M93690-2|AAA29363.1| 1212|Anopheles gambiae unknown protein.
Length = 1212
Score = 32.3 bits (70), Expect = 0.015
Identities = 29/133 (21%), Positives = 58/133 (43%), Gaps = 5/133 (3%)
Frame = +2
Query: 233 ATIIAPSGFQAY*LERLKKNLTNRSSTVVAGGHSSMSFPVLSGVPQGSHLGPLLFNAFIN 412
AT + G A L+R+ ++ V ++ + +GVPQGS LGP L+N +
Sbjct: 651 ATALQMKGVPAG-LQRIVRSYFENRELVFETSDGPVTRSITAGVPQGSILGPTLWNTMYD 709
Query: 413 DI--GSCFRSTKFYMFADDL-KFFRKVNSSLDSELLQRDLDSLFGWCSANGMSLNISK-- 577
+ + + + +ADDL ++ + + + S+ W + + + + K
Sbjct: 710 GVLDVALPQDCEMVAYADDLVLLIPGIDVNAVKAAAEEAVASVSHWMAQHHLQIAPEKTE 769
Query: 578 CYVIRFTRKKTLI 616
C +I T+ T +
Sbjct: 770 CVLISSTKNPTQV 782
>AB090815-2|BAC57906.1| 973|Anopheles gambiae reverse transcriptase
protein.
Length = 973
Score = 31.5 bits (68), Expect = 0.027
Identities = 25/89 (28%), Positives = 39/89 (43%), Gaps = 3/89 (3%)
Frame = +2
Query: 356 SGVPQGSHLGPLLFNAFINDIGSCF--RSTKFYMFADDLKFFRKVNSSLDSELLQRD-LD 526
+GVPQGS LGP L+N N + + + FADD+ S + ELL D +
Sbjct: 599 AGVPQGSILGPTLWNVMYNGVLTLGLPPGPEVIGFADDIALTVLGESIEEIELLTSDSVS 658
Query: 527 SLFGWCSANGMSLNISKCYVIRFTRKKTL 613
+ W + + K + + KT+
Sbjct: 659 RIESWMQQMRLEIAHKKTEFLIISSHKTV 687
>AB090822-2|BAC57920.1| 1173|Anopheles gambiae reverse transcriptase
protein.
Length = 1173
Score = 30.7 bits (66), Expect = 0.047
Identities = 21/87 (24%), Positives = 39/87 (44%), Gaps = 3/87 (3%)
Frame = +2
Query: 356 SGVPQGSHLGPLLFNAFINDI--GSCFRSTKFYMFADDLKFFRK-VNSSLDSELLQRDLD 526
+GVPQGS LGP L+N + + + FADDL + S+ + +
Sbjct: 644 TGVPQGSILGPTLWNVMYDSVLDVQLPEGAEIIAFADDLLLLDPGITPEAASQRAEEAVS 703
Query: 527 SLFGWCSANGMSLNISKCYVIRFTRKK 607
++ W + + L +K ++ + K+
Sbjct: 704 AVNLWMENHCLELAPAKTELVTISSKR 730
>AB090820-2|BAC57916.1| 1222|Anopheles gambiae reverse transcriptase
protein.
Length = 1222
Score = 29.9 bits (64), Expect = 0.082
Identities = 19/75 (25%), Positives = 37/75 (49%), Gaps = 3/75 (4%)
Frame = +2
Query: 350 VLSGVPQGSHLGPLLFNAFINDI--GSCFRSTKFYMFADDLKFFRKVNSSLDSELL-QRD 520
V +GVPQGS LGP L+N + + +ADD+ + + ++ L+ ++
Sbjct: 628 VTAGVPQGSILGPTLWNIMYDGVLRVELPEGASVIGYADDIVVMARGCTPQEAALVAEQA 687
Query: 521 LDSLFGWCSANGMSL 565
+D++ W + + L
Sbjct: 688 VDAIAAWMEDHHLQL 702
>AB090813-2|BAC57902.1| 1099|Anopheles gambiae reverse transcriptase
protein.
Length = 1099
Score = 29.1 bits (62), Expect = 0.14
Identities = 12/23 (52%), Positives = 16/23 (69%)
Frame = +2
Query: 350 VLSGVPQGSHLGPLLFNAFINDI 418
V +GVPQGS LGP L+N + +
Sbjct: 622 VTAGVPQGSILGPTLWNTMYDGV 644
>AJ970250-1|CAI96722.1| 132|Anopheles gambiae putative reverse
transcriptase protein.
Length = 132
Score = 28.7 bits (61), Expect = 0.19
Identities = 21/57 (36%), Positives = 27/57 (47%), Gaps = 3/57 (5%)
Frame = +2
Query: 215 FLNLYHATIIAPSG---FQAY*LERLKKNLTNRSSTVVAGGHSSMSFPVLSGVPQGS 376
F +L HA ++A F ++ LK L NR+ V H S SGVPQGS
Sbjct: 76 FDSLPHAILLAKLNKVRFPCSLVQWLKSYLINRTYIVKIDKHMSKKIVSSSGVPQGS 132
>AJ970247-1|CAI96719.1| 132|Anopheles gambiae putative reverse
transcriptase protein.
Length = 132
Score = 28.7 bits (61), Expect = 0.19
Identities = 15/32 (46%), Positives = 18/32 (56%)
Frame = +2
Query: 281 LKKNLTNRSSTVVAGGHSSMSFPVLSGVPQGS 376
L+ L R+ +V G H S S SGVPQGS
Sbjct: 101 LRSYLMGRTYSVRMGPHLSRSLRASSGVPQGS 132
>AB090812-2|BAC57900.1| 1173|Anopheles gambiae reverse transcriptase
protein.
Length = 1173
Score = 28.7 bits (61), Expect = 0.19
Identities = 12/23 (52%), Positives = 16/23 (69%)
Frame = +2
Query: 350 VLSGVPQGSHLGPLLFNAFINDI 418
V +GVPQGS LGP L+N + +
Sbjct: 641 VSAGVPQGSILGPTLWNVMYDGV 663
>AB090816-2|BAC57908.1| 1201|Anopheles gambiae reverse transcriptase
protein.
Length = 1201
Score = 27.9 bits (59), Expect = 0.33
Identities = 11/23 (47%), Positives = 16/23 (69%)
Frame = +2
Query: 350 VLSGVPQGSHLGPLLFNAFINDI 418
+ +GVPQGS LGP L+N + +
Sbjct: 697 ISAGVPQGSILGPTLWNMMYDGV 719
>AJ970248-1|CAI96720.1| 132|Anopheles gambiae putative reverse
transcriptase protein.
Length = 132
Score = 26.2 bits (55), Expect = 1.0
Identities = 14/32 (43%), Positives = 17/32 (53%)
Frame = +2
Query: 281 LKKNLTNRSSTVVAGGHSSMSFPVLSGVPQGS 376
L+ L R+ +V G H S SGVPQGS
Sbjct: 101 LRSYLMGRTYSVRMGPHLSRFLRASSGVPQGS 132
>AB090814-2|BAC57904.1| 1049|Anopheles gambiae reverse transcriptase
protein.
Length = 1049
Score = 26.2 bits (55), Expect = 1.0
Identities = 18/57 (31%), Positives = 27/57 (47%), Gaps = 2/57 (3%)
Frame = +2
Query: 356 SGVPQGSHLGPLLFNAFINDIGSCF--RSTKFYMFADDLKFFRKVNSSLDSELLQRD 520
+GVPQGS LG L+N + + + + FADD+ S + E+L D
Sbjct: 660 AGVPQGSVLGLTLWNVIYDGVLTLALPHGVEITGFADDIAITVSAVSIEEVEMLATD 716
>AB090824-2|BAC57924.1| 1248|Anopheles gambiae reverse transcriptase
protein.
Length = 1248
Score = 25.8 bits (54), Expect = 1.3
Identities = 11/17 (64%), Positives = 13/17 (76%)
Frame = +2
Query: 350 VLSGVPQGSHLGPLLFN 400
V +G PQGS LGP L+N
Sbjct: 626 VSAGCPQGSMLGPRLWN 642
>AB090821-2|BAC57918.1| 1168|Anopheles gambiae reverse transcriptase
protein.
Length = 1168
Score = 25.8 bits (54), Expect = 1.3
Identities = 16/41 (39%), Positives = 21/41 (51%), Gaps = 2/41 (4%)
Frame = +2
Query: 350 VLSGVPQGSHLGPLLFNAFINDIGSCF--RSTKFYMFADDL 466
V +GV QGS LGP L+N + + + FADDL
Sbjct: 631 VSAGVTQGSILGPTLWNIMYDGVLAVELPEGASIVGFADDL 671
>AB090823-2|BAC57922.1| 1154|Anopheles gambiae reverse transcriptase
protein.
Length = 1154
Score = 25.0 bits (52), Expect = 2.3
Identities = 10/23 (43%), Positives = 15/23 (65%)
Frame = +2
Query: 350 VLSGVPQGSHLGPLLFNAFINDI 418
+ +GVPQ S LGP L+N + +
Sbjct: 636 ISAGVPQESILGPTLWNVMYDGV 658
>AJ970245-1|CAI96717.1| 134|Anopheles gambiae putative reverse
transcriptase protein.
Length = 134
Score = 24.6 bits (51), Expect = 3.1
Identities = 12/40 (30%), Positives = 22/40 (55%)
Frame = +2
Query: 257 FQAY*LERLKKNLTNRSSTVVAGGHSSMSFPVLSGVPQGS 376
F +Y + + ++NR + V +S ++ +GVPQGS
Sbjct: 95 FPSYLINIVNSFISNRQNKVHILNSTSSTYTPKAGVPQGS 134
>AJ438610-4|CAD27476.1| 593|Anopheles gambiae putative
transcription factor protein.
Length = 593
Score = 24.2 bits (50), Expect = 4.1
Identities = 10/17 (58%), Positives = 11/17 (64%)
Frame = -1
Query: 344 RTSTSDPPQQPWTICSL 294
RT +S PP P TIC L
Sbjct: 458 RTPSSSPPLTPNTICGL 474
>AJ970251-1|CAI96723.1| 131|Anopheles gambiae putative reverse
transcriptase protein.
Length = 131
Score = 23.8 bits (49), Expect = 5.4
Identities = 16/41 (39%), Positives = 20/41 (48%)
Frame = +2
Query: 242 IAPSGFQAY*LERLKKNLTNRSSTVVAGGHSSMSFPVLSGV 364
+A GF A +E L+ LTNR V +S F SGV
Sbjct: 88 LARLGFSASLVEWLESYLTNRRYRVKVDCMTSREFVSCSGV 128
>AY062204-1|AAL58565.1| 150|Anopheles gambiae cytochrome P450
CYP4C28 protein.
Length = 150
Score = 23.0 bits (47), Expect = 9.5
Identities = 10/21 (47%), Positives = 12/21 (57%)
Frame = +3
Query: 372 ALIWVLYFLMHSSTTLARVFV 434
AL W+LY L T RVF+
Sbjct: 16 ALAWMLYLLGTDQTVQERVFL 36
Database: mosquito
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 563,979
Number of sequences in database: 2352
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 755,369
Number of Sequences: 2352
Number of extensions: 15076
Number of successful extensions: 128
Number of sequences better than 10.0: 24
Number of HSP's better than 10.0 without gapping: 126
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 128
length of database: 563,979
effective HSP length: 62
effective length of database: 418,155
effective search space used: 72758970
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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