Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= brS-1122
(710 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
M14954-2|AAA70222.2| 1219|Drosophila melanogaster putative ORF2 ... 71 2e-12
X17551-2|CAA35587.1| 888|Drosophila melanogaster protein ( D.me... 55 1e-07
AJ302712-2|CAC16871.1| 1227|Drosophila melanogaster pol protein. 54 1e-07
AY047531-1|AAK77263.1| 888|Drosophila melanogaster GH03753p pro... 52 6e-07
M22874-2|AAA28675.1| 916|Drosophila melanogaster protein ( D.me... 50 3e-06
AY089343-1|AAL90081.2| 718|Drosophila melanogaster AT16518p pro... 50 3e-06
AY180919-1|AAN87272.1| 884|Drosophila melanogaster ORF1 protein. 45 1e-04
AY060323-1|AAL25362.1| 241|Drosophila melanogaster GH20809p pro... 45 1e-04
AF456125-1|AAL57609.1| 832|Drosophila melanogaster reverse tran... 45 1e-04
U14101-2|AAC46494.1| 1084|Drosophila melanogaster putative rever... 43 4e-04
M17214-2|AAA28508.1| 858|Drosophila melanogaster protein ( D.me... 43 4e-04
AY600955-2|AAT12845.1| 1092|Drosophila melanogaster pol protein ... 42 8e-04
U02279-1|AAA18301.1| 964|Drosophila melanogaster protein ( Dros... 40 0.003
AY561850-2|AAS68534.1| 1080|Drosophila melanogaster pol protein ... 40 0.003
AY060438-1|AAL25477.1| 906|Drosophila melanogaster LD46618p pro... 40 0.003
AY035777-2|AAK77971.1| 1080|Drosophila melanogaster pol protein ... 40 0.003
AM040245-1|CAJ13341.1| 1042|Drosophila melanogaster pol protein ... 40 0.003
AJ566116-2|CAD92793.1| 1080|Drosophila melanogaster pol protein ... 40 0.003
AF237761-2|AAF81411.1| 908|Drosophila melanogaster unknown prot... 39 0.008
AJ278684-2|CAB99192.1| 989|Drosophila melanogaster endonuclease... 38 0.010
AY071740-1|AAL49362.1| 184|Drosophila melanogaster RH47344p pro... 37 0.024
AM040243-1|CAJ13339.1| 656|Drosophila melanogaster pol protein ... 36 0.041
AM040242-2|CAJ13338.1| 1103|Drosophila melanogaster pol protein ... 36 0.041
AJ542582-2|CAD65871.1| 1103|Drosophila melanogaster pol protein ... 36 0.041
AJ542581-2|CAD65869.1| 1103|Drosophila melanogaster pol protein ... 36 0.041
BT023148-1|AAY55564.1| 276|Drosophila melanogaster IP03509p pro... 30 2.7
AE014297-247|AAF52031.2| 486|Drosophila melanogaster CG10609-PA... 30 2.7
X51968-2|CAA36227.1| 1021|Drosophila melanogaster protein ( Dros... 30 3.6
AY118706-1|AAM50566.1| 469|Drosophila melanogaster AT22075p pro... 30 3.6
AE014134-1132|AAF52417.2| 451|Drosophila melanogaster CG13771-P... 30 3.6
AE014134-578|AAF51129.2| 469|Drosophila melanogaster CG15406-PA... 30 3.6
AY567998-1|AAT71306.1| 486|Drosophila melanogaster odorant rece... 29 4.7
M84795-1|AAA28307.1| 455|Drosophila melanogaster 60A protein pr... 29 8.2
M77012-1|AAA28306.1| 455|Drosophila melanogaster 60A protein. 29 8.2
AE013599-3701|AAF47075.1| 455|Drosophila melanogaster CG5562-PA... 29 8.2
>M14954-2|AAA70222.2| 1219|Drosophila melanogaster putative ORF2
protein.
Length = 1219
Score = 70.9 bits (166), Expect = 2e-12
Identities = 39/116 (33%), Positives = 64/116 (55%), Gaps = 4/116 (3%)
Frame = +2
Query: 272 LERLKKNLTNRSSTVVAGGHSSMSFPVLSGVPQGSHLGPLLF-NAF--INDIGSCFRSTK 442
++ +K ++NR TV G H+S P+ +G+PQGS + +LF AF +++I S + K
Sbjct: 603 IKYIKNFMSNRKITVRVGPHTSSPLPLFNGIPQGSPISVILFLIAFNKLSNIISLHKEIK 662
Query: 443 FYMFADDLKFFRKVNSSLDSEL-LQRDLDSLFGWCSANGMSLNISKCYVIRFTRKK 607
F +ADD N + ++ L D + WCS +G SL++SKC + RK+
Sbjct: 663 FNAYADDFFLIINFNKNTNTNFNLDNLFDDIENWCSYSGASLSLSKCQHLHICRKR 718
>X17551-2|CAA35587.1| 888|Drosophila melanogaster protein (
D.melanogaster white-one mutant DNA with Doc retroposon,
inserted inwhite locuspromoter region. ).
Length = 888
Score = 54.8 bits (126), Expect = 1e-07
Identities = 37/117 (31%), Positives = 54/117 (46%), Gaps = 1/117 (0%)
Frame = +2
Query: 281 LKKNLTNRSSTVVAGGHSSMSFPVLSGVPQGSHLGPLLFNAFINDIGSCFRSTKFYMFAD 460
LK L NR + +S + +GVPQGS LGP+L+ + D + T FAD
Sbjct: 609 LKSYLYNRVFAIRCDTSTSRDCAIEAGVPQGSVLGPILYTLYTADFPIDYNLTT-STFAD 667
Query: 461 DLKFFRKVNSSLD-SELLQRDLDSLFGWCSANGMSLNISKCYVIRFTRKKTLIFPNV 628
D + + + LL R L S+ W + +S+N+ KC + FT K P V
Sbjct: 668 DTAILSRSKCPIKATALLSRHLTSVERWLADWRISINVQKCKQVTFTLNKQTCPPLV 724
>AJ302712-2|CAC16871.1| 1227|Drosophila melanogaster pol protein.
Length = 1227
Score = 54.4 bits (125), Expect = 1e-07
Identities = 38/113 (33%), Positives = 54/113 (47%), Gaps = 4/113 (3%)
Frame = +2
Query: 281 LKKNLTNRSSTVVAGGHSSMSFPVLSGVPQGSHLGPLLFNAFINDIGSCF-RSTKFY--M 451
+K +TNRS V +S S + +G+PQGS L +LF I DI R Y +
Sbjct: 614 IKAFMTNRSFRVRINNVTSNSHILHNGIPQGSPLSVVLFMIAIEDINDIVTRHKDIYISL 673
Query: 452 FADDLKFFRKV-NSSLDSELLQRDLDSLFGWCSANGMSLNISKCYVIRFTRKK 607
+ADD F K+ N + E L + W + +G SL I KC + RK+
Sbjct: 674 YADDAIIFTKIKNINTVREKFLEILQEINSWGATSGASLAIEKCQTLHICRKQ 726
>AY047531-1|AAK77263.1| 888|Drosophila melanogaster GH03753p
protein.
Length = 888
Score = 52.4 bits (120), Expect = 6e-07
Identities = 36/117 (30%), Positives = 53/117 (45%), Gaps = 1/117 (0%)
Frame = +2
Query: 281 LKKNLTNRSSTVVAGGHSSMSFPVLSGVPQGSHLGPLLFNAFINDIGSCFRSTKFYMFAD 460
LK L N + +S + +GVPQGS LGP+L+ + D + T FAD
Sbjct: 609 LKSYLYNTVFAIRCDTSTSRDCAIEAGVPQGSVLGPILYTLYTADFPIDYNLTT-STFAD 667
Query: 461 DLKFFRKVNSSLD-SELLQRDLDSLFGWCSANGMSLNISKCYVIRFTRKKTLIFPNV 628
D + + + LL R L S+ W + +S+N+ KC + FT K P V
Sbjct: 668 DTAILSRSKCPIKATALLSRHLTSVERWLADWRISINVQKCKQVTFTLNKQTCPPLV 724
>M22874-2|AAA28675.1| 916|Drosophila melanogaster protein (
D.melanogaster LINEelement J-1, clone J-1. ).
Length = 916
Score = 50.0 bits (114), Expect = 3e-06
Identities = 39/125 (31%), Positives = 57/125 (45%), Gaps = 8/125 (6%)
Frame = +2
Query: 281 LKKNLTNRSSTVVAGGHSSMSFPVLSGVPQGSHLGPLLFNAFINDIGSCFRSTK------ 442
+K L R+ V G+ S P+ +GVPQGS LGP L++ F +D+ + T+
Sbjct: 615 VKSFLEERTFHVSVDGYKSSIKPIAAGVPQGSVLGPTLYSVFASDMPTHTPVTEVDEEDV 674
Query: 443 -FYMFADDLKFFRKVNSSLDSEL-LQRDLDSLFGWCSANGMSLNISKCYVIRFTRKKTLI 616
+ADD K S L + LQ LD+ W + +N KC + F +T
Sbjct: 675 LIATYADDTAVLTKSKSILAATSGLQEYLDAFQQWAENWNVRINAEKCANVTFA-NRTGS 733
Query: 617 FPNVS 631
P VS
Sbjct: 734 CPGVS 738
>AY089343-1|AAL90081.2| 718|Drosophila melanogaster AT16518p
protein.
Length = 718
Score = 50.0 bits (114), Expect = 3e-06
Identities = 39/125 (31%), Positives = 57/125 (45%), Gaps = 8/125 (6%)
Frame = +2
Query: 281 LKKNLTNRSSTVVAGGHSSMSFPVLSGVPQGSHLGPLLFNAFINDIGSCFRSTK------ 442
+K L R+ V G+ S P+ +GVPQGS LGP L++ F +D+ + T+
Sbjct: 417 VKSFLEERTFHVSVDGYKSSIKPIAAGVPQGSVLGPTLYSVFASDMPTHTPVTEVDEEDV 476
Query: 443 -FYMFADDLKFFRKVNSSLDSEL-LQRDLDSLFGWCSANGMSLNISKCYVIRFTRKKTLI 616
+ADD K S L + LQ LD+ W + +N KC + F +T
Sbjct: 477 LIATYADDTAVLTKSKSILAATSGLQEYLDAFQQWAENWNVRINAEKCANVTFA-NRTGS 535
Query: 617 FPNVS 631
P VS
Sbjct: 536 CPGVS 540
>AY180919-1|AAN87272.1| 884|Drosophila melanogaster ORF1 protein.
Length = 884
Score = 44.8 bits (101), Expect = 1e-04
Identities = 35/119 (29%), Positives = 59/119 (49%), Gaps = 1/119 (0%)
Frame = +2
Query: 254 GFQAY*LERLKKNLTNRSSTVVAGGHSSMSFPVLSGVPQGSHLGPLLFNAFINDIGSCFR 433
G Y ++ ++ LT+R +V S + +GVPQGS LGP LFN F +DI
Sbjct: 630 GTPIYLIKIVQNFLTHRYFSVNLNSSQSARRILNAGVPQGSVLGPTLFNIFTHDIPQA-T 688
Query: 434 STKFYMFADDLKFFRK-VNSSLDSELLQRDLDSLFGWCSANGMSLNISKCYVIRFTRKK 607
+ +FADD + + S ++ +Q L+ L + + +N +K I FT+++
Sbjct: 689 NCVLSLFADDAAVYSAGFSYSEINQSMQSYLNELDIYYKKWKIKINPNKTNAIFFTKRR 747
>AY060323-1|AAL25362.1| 241|Drosophila melanogaster GH20809p
protein.
Length = 241
Score = 44.8 bits (101), Expect = 1e-04
Identities = 24/61 (39%), Positives = 34/61 (55%)
Frame = +2
Query: 281 LKKNLTNRSSTVVAGGHSSMSFPVLSGVPQGSHLGPLLFNAFINDIGSCFRSTKFYMFAD 460
LK L R V +S F + +GVPQGS LGP+L+ + DI + ++ T + FAD
Sbjct: 150 LKSYLDKRVFAVRCSSSTSSDFTIEAGVPQGSVLGPILYTLYTADIPTNYQLT-IFTFAD 208
Query: 461 D 463
D
Sbjct: 209 D 209
>AF456125-1|AAL57609.1| 832|Drosophila melanogaster reverse
transcriptase protein.
Length = 832
Score = 44.8 bits (101), Expect = 1e-04
Identities = 35/119 (29%), Positives = 59/119 (49%), Gaps = 1/119 (0%)
Frame = +2
Query: 254 GFQAY*LERLKKNLTNRSSTVVAGGHSSMSFPVLSGVPQGSHLGPLLFNAFINDIGSCFR 433
G Y ++ ++ LT+R +V S + +GVPQGS LGP LFN F +DI
Sbjct: 578 GTPIYLIKIVQNFLTHRYFSVNLNSSQSARRILNAGVPQGSVLGPTLFNIFTHDIPQA-T 636
Query: 434 STKFYMFADDLKFFRK-VNSSLDSELLQRDLDSLFGWCSANGMSLNISKCYVIRFTRKK 607
+ +FADD + + S ++ +Q L+ L + + +N +K I FT+++
Sbjct: 637 NCVLSLFADDAAVYSAGFSYSEINQSMQSYLNELDIYYKKWKIKINPNKTNAIFFTKRR 695
>U14101-2|AAC46494.1| 1084|Drosophila melanogaster putative reverse
transcriptase protein.
Length = 1084
Score = 43.2 bits (97), Expect = 4e-04
Identities = 37/120 (30%), Positives = 60/120 (50%), Gaps = 9/120 (7%)
Frame = +2
Query: 281 LKKNLTNRSSTVV-AGGHSSMSFPVLSGVPQGSHLGPLLFNAFINDIGSCF----RSTKF 445
L+ LTNR+ V G +S + + +GVPQGS+LGPLL++ F +D+ + T+
Sbjct: 658 LESYLTNRTFEVKDQAGETSRTGQIGAGVPQGSNLGPLLYSIFSSDMPLPYIYRPSPTER 717
Query: 446 YM---FADD-LKFFRKVNSSLDSELLQRDLDSLFGWCSANGMSLNISKCYVIRFTRKKTL 613
M +ADD + ++ + + L S W G+S+N +K + FT K L
Sbjct: 718 IMLSTYADDTIVLSSDTLATAATRNNENYLKSFSDWADKWGISVNAAKTGHVIFTLKNDL 777
>M17214-2|AAA28508.1| 858|Drosophila melanogaster protein (
D.melanogaster Fw repetitiveelement putative reverse
transcriptase, complete cds,and putative binding
protein, 3' end. ).
Length = 858
Score = 43.2 bits (97), Expect = 4e-04
Identities = 34/107 (31%), Positives = 48/107 (44%), Gaps = 1/107 (0%)
Frame = +2
Query: 281 LKKNLTNRSSTVVAGGHSSMSFPVLSGVPQGSHLGPLLFNAFINDIGSCFRSTKFYMFAD 460
LK L +R V +S + +GVPQGS LGP L+ + DI + R T FAD
Sbjct: 611 LKSYLYDRKFAVRCNTATSTVHTIEAGVPQGSVLGPTLYLIYTADIPTNSRLT-VSTFAD 669
Query: 461 DLKFFRKVNSSLDSEL-LQRDLDSLFGWCSANGMSLNISKCYVIRFT 598
D + S + + L L + W S + +N KC + FT
Sbjct: 670 DTAILSRSRSPIQATAQLALYLIDIKKWLSDWRIKVNEQKCKHVTFT 716
>AY600955-2|AAT12845.1| 1092|Drosophila melanogaster pol protein
protein.
Length = 1092
Score = 41.9 bits (94), Expect = 8e-04
Identities = 35/120 (29%), Positives = 58/120 (48%), Gaps = 9/120 (7%)
Frame = +2
Query: 281 LKKNLTNRSSTVV-AGGHSSMSFPVLSGVPQGSHLGPLLFNAFINDI-------GSCFRS 436
L+ LTNR+ V G +S + + +GVPQGS+LGPLL++ F +D+ S +
Sbjct: 670 LESYLTNRTFEVKDQAGETSRTGQIGAGVPQGSNLGPLLYSIFSSDMPLPYIYRPSPTQR 729
Query: 437 TKFYMFADD-LKFFRKVNSSLDSELLQRDLDSLFGWCSANGMSLNISKCYVIRFTRKKTL 613
+ADD + ++ + + L + W G+S+N +K + FT K L
Sbjct: 730 IMLSTYADDTIVLSSDTLATAATRNNENYLKTFSDWADKWGISVNAAKTGHVIFTLKNDL 789
>U02279-1|AAA18301.1| 964|Drosophila melanogaster protein (
Drosophila melanogastertelomere-associated transposons
TART, TART-A and HeT-A,and TART-A ORF2 gene, partial
cds. ).
Length = 964
Score = 39.9 bits (89), Expect = 0.003
Identities = 20/47 (42%), Positives = 32/47 (68%), Gaps = 1/47 (2%)
Frame = +2
Query: 281 LKKNLTNRSSTVV-AGGHSSMSFPVLSGVPQGSHLGPLLFNAFINDI 418
L+ LTNR+ V G +S + + +GVPQGS+LGP+L++ F +D+
Sbjct: 542 LESYLTNRTFEVKDQAGETSRAGQIGAGVPQGSNLGPILYSIFSSDM 588
>AY561850-2|AAS68534.1| 1080|Drosophila melanogaster pol protein
protein.
Length = 1080
Score = 39.9 bits (89), Expect = 0.003
Identities = 20/47 (42%), Positives = 32/47 (68%), Gaps = 1/47 (2%)
Frame = +2
Query: 281 LKKNLTNRSSTVV-AGGHSSMSFPVLSGVPQGSHLGPLLFNAFINDI 418
L+ LTNR+ V G +S + + +GVPQGS+LGP+L++ F +D+
Sbjct: 658 LESYLTNRTFEVKDQAGETSRAGQIGAGVPQGSNLGPILYSIFSSDM 704
>AY060438-1|AAL25477.1| 906|Drosophila melanogaster LD46618p
protein.
Length = 906
Score = 39.9 bits (89), Expect = 0.003
Identities = 35/116 (30%), Positives = 51/116 (43%), Gaps = 8/116 (6%)
Frame = +2
Query: 281 LKKNLTNRSSTVVAGGHSSMSFPVLSGVPQGSHLGPLLFNAFINDI--GSCF-----RST 439
LK L +R V S+ + +GVPQGS LGPLL++ F D+ + + R
Sbjct: 614 LKSYLEDRRFMVRVRNSYSIPRVMRAGVPQGSVLGPLLYSVFTADLPCPNAYHMADPRKA 673
Query: 440 KFYMFADDLKFFRKVNSSLDSEL-LQRDLDSLFGWCSANGMSLNISKCYVIRFTRK 604
+ADD+ N ++ LQ L +L WC + +N K FT K
Sbjct: 674 LLATYADDIALLYSSNCCNEAARGLQEYLTTLAAWCKRWILKVNPQKTINPCFTLK 729
>AY035777-2|AAK77971.1| 1080|Drosophila melanogaster pol protein
protein.
Length = 1080
Score = 39.9 bits (89), Expect = 0.003
Identities = 20/47 (42%), Positives = 32/47 (68%), Gaps = 1/47 (2%)
Frame = +2
Query: 281 LKKNLTNRSSTVV-AGGHSSMSFPVLSGVPQGSHLGPLLFNAFINDI 418
L+ LTNR+ V G +S + + +GVPQGS+LGP+L++ F +D+
Sbjct: 658 LESYLTNRTFEVKDQAGETSRAGQIGAGVPQGSNLGPILYSIFSSDM 704
>AM040245-1|CAJ13341.1| 1042|Drosophila melanogaster pol protein
protein.
Length = 1042
Score = 39.9 bits (89), Expect = 0.003
Identities = 20/47 (42%), Positives = 32/47 (68%), Gaps = 1/47 (2%)
Frame = +2
Query: 281 LKKNLTNRSSTVV-AGGHSSMSFPVLSGVPQGSHLGPLLFNAFINDI 418
L+ LTNR+ V G +S + + +GVPQGS+LGP+L++ F +D+
Sbjct: 620 LESYLTNRTFEVKDQAGETSRAGQIGAGVPQGSNLGPILYSIFSSDM 666
>AJ566116-2|CAD92793.1| 1080|Drosophila melanogaster pol protein
protein.
Length = 1080
Score = 39.9 bits (89), Expect = 0.003
Identities = 20/47 (42%), Positives = 32/47 (68%), Gaps = 1/47 (2%)
Frame = +2
Query: 281 LKKNLTNRSSTVV-AGGHSSMSFPVLSGVPQGSHLGPLLFNAFINDI 418
L+ LTNR+ V G +S + + +GVPQGS+LGP+L++ F +D+
Sbjct: 658 LESYLTNRTFEVKDQAGETSRAGQIGAGVPQGSNLGPILYSIFSSDM 704
>AF237761-2|AAF81411.1| 908|Drosophila melanogaster unknown
protein.
Length = 908
Score = 38.7 bits (86), Expect = 0.008
Identities = 34/114 (29%), Positives = 49/114 (42%), Gaps = 5/114 (4%)
Frame = +2
Query: 281 LKKNLTNRSSTVVAGGHSSMSFPVLSGVPQGSHLGPLLFNAFINDIG----SCFRSTKFY 448
LK L R V S V +GVPQGS LGPLL+ + +D+ S + +
Sbjct: 613 LKSYLEGRRFAVRFHSAISTEHNVAAGVPQGSVLGPLLYCLYSHDMPQPDVSLYGKSMLA 672
Query: 449 MFADDLKFFRKVNSSLDSELLQRDLDSLFG-WCSANGMSLNISKCYVIRFTRKK 607
FADD+ + D+ +D F W + +N SK + FT K+
Sbjct: 673 TFADDVCVTYRSRCEHDAADGIQDFAYRFSEWARRWNIGINSSKSNNVCFTLKR 726
>AJ278684-2|CAB99192.1| 989|Drosophila melanogaster
endonuclease/reverse transcriptase protein.
Length = 989
Score = 38.3 bits (85), Expect = 0.010
Identities = 25/94 (26%), Positives = 45/94 (47%), Gaps = 3/94 (3%)
Frame = +2
Query: 341 SFPVLSGVPQGSHLGPLLFNAFINDIGSCF--RSTKFYMFADDLKFFRKVNSSLD-SELL 511
S V +GVPQGS LGP+L+N + I S R + + FADD+ + + ++
Sbjct: 606 SHQVSAGVPQGSVLGPILWNIMYDGILSISKPRGVELHCFADDVAITAVAKTIPELQDIS 665
Query: 512 QRDLDSLFGWCSANGMSLNISKCYVIRFTRKKTL 613
+ + W G+ + K V+ + +K++
Sbjct: 666 NVAITAAIEWLEKVGLKIAAHKTEVVLLSSRKSV 699
>AY071740-1|AAL49362.1| 184|Drosophila melanogaster RH47344p
protein.
Length = 184
Score = 37.1 bits (82), Expect = 0.024
Identities = 28/92 (30%), Positives = 44/92 (47%), Gaps = 4/92 (4%)
Frame = +2
Query: 350 VLSGVPQGSHLGPLLFNAFINDI--GSCFRSTKFYMFADD--LKFFRKVNSSLDSELLQR 517
V GVPQGS LGPLL+N + I ++ FADD L K + E+ R
Sbjct: 47 VTGGVPQGSVLGPLLWNTMYDGILRLPLVGRSEIVGFADDVALLVVDKYPGKAE-EMCNR 105
Query: 518 DLDSLFGWCSANGMSLNISKCYVIRFTRKKTL 613
++ ++ W S+ G+ L K + + +K +
Sbjct: 106 NIRAIEHWLSSMGLELAPEKTKAVLISSRKAV 137
>AM040243-1|CAJ13339.1| 656|Drosophila melanogaster pol protein
protein.
Length = 656
Score = 36.3 bits (80), Expect = 0.041
Identities = 19/52 (36%), Positives = 34/52 (65%), Gaps = 1/52 (1%)
Frame = +2
Query: 266 Y*LERLKKNLTNRSSTV-VAGGHSSMSFPVLSGVPQGSHLGPLLFNAFINDI 418
Y + L+ L+NR+ +V + G +S + +GVPQGS LGP+L++ + +D+
Sbjct: 209 YLFDLLENYLSNRTFSVRIDGETTSRIGNIRAGVPQGSILGPVLYSIYSSDM 260
>AM040242-2|CAJ13338.1| 1103|Drosophila melanogaster pol protein
protein.
Length = 1103
Score = 36.3 bits (80), Expect = 0.041
Identities = 19/52 (36%), Positives = 34/52 (65%), Gaps = 1/52 (1%)
Frame = +2
Query: 266 Y*LERLKKNLTNRSSTV-VAGGHSSMSFPVLSGVPQGSHLGPLLFNAFINDI 418
Y + L+ L+NR+ +V + G +S + +GVPQGS LGP+L++ + +D+
Sbjct: 656 YLFDLLENYLSNRTFSVRIDGETTSRIGNIRAGVPQGSILGPVLYSIYSSDM 707
>AJ542582-2|CAD65871.1| 1103|Drosophila melanogaster pol protein
protein.
Length = 1103
Score = 36.3 bits (80), Expect = 0.041
Identities = 19/52 (36%), Positives = 34/52 (65%), Gaps = 1/52 (1%)
Frame = +2
Query: 266 Y*LERLKKNLTNRSSTV-VAGGHSSMSFPVLSGVPQGSHLGPLLFNAFINDI 418
Y + L+ L+NR+ +V + G +S + +GVPQGS LGP+L++ + +D+
Sbjct: 656 YLFDLLENYLSNRTFSVRIDGETTSRIGNIRAGVPQGSILGPVLYSIYSSDM 707
>AJ542581-2|CAD65869.1| 1103|Drosophila melanogaster pol protein
protein.
Length = 1103
Score = 36.3 bits (80), Expect = 0.041
Identities = 19/52 (36%), Positives = 34/52 (65%), Gaps = 1/52 (1%)
Frame = +2
Query: 266 Y*LERLKKNLTNRSSTV-VAGGHSSMSFPVLSGVPQGSHLGPLLFNAFINDI 418
Y + L+ L+NR+ +V + G +S + +GVPQGS LGP+L++ + +D+
Sbjct: 656 YLFDLLENYLSNRTFSVRIDGETTSRIGNIRAGVPQGSILGPVLYSIYSSDM 707
>BT023148-1|AAY55564.1| 276|Drosophila melanogaster IP03509p
protein.
Length = 276
Score = 30.3 bits (65), Expect = 2.7
Identities = 18/71 (25%), Positives = 32/71 (45%), Gaps = 2/71 (2%)
Frame = +2
Query: 389 LLFNAFINDIGSCFRSTKFYMFADDLKFF--RKVNSSLDSELLQRDLDSLFGWCSANGMS 562
L F + + S T F D +K + NSS+ E+ + + S + W +++GM
Sbjct: 139 LFFLVMLTTVASATAWTTITFFGDSVKMVVDHETNSSIPVEIPRLPIKSFYPWNASHGMF 198
Query: 563 LNISKCYVIRF 595
IS + I +
Sbjct: 199 YMISFAFQIYY 209
>AE014297-247|AAF52031.2| 486|Drosophila melanogaster CG10609-PA
protein.
Length = 486
Score = 30.3 bits (65), Expect = 2.7
Identities = 18/71 (25%), Positives = 32/71 (45%), Gaps = 2/71 (2%)
Frame = +2
Query: 389 LLFNAFINDIGSCFRSTKFYMFADDLKFF--RKVNSSLDSELLQRDLDSLFGWCSANGMS 562
L F + + S T F D +K + NSS+ E+ + + S + W +++GM
Sbjct: 135 LFFLVMLTTVASATAWTTITFFGDSVKMVVDHETNSSIPVEIPRLPIKSFYPWNASHGMF 194
Query: 563 LNISKCYVIRF 595
IS + I +
Sbjct: 195 YMISFAFQIYY 205
>X51968-2|CAA36227.1| 1021|Drosophila melanogaster protein (
Drosophila melanogasterDNA for type I retrotransposable
element R1Dm. ).
Length = 1021
Score = 29.9 bits (64), Expect = 3.6
Identities = 24/94 (25%), Positives = 42/94 (44%), Gaps = 2/94 (2%)
Frame = +2
Query: 314 VVAGGHSSMSFPVLSGVPQGSHLGPLLFNAFINDIGSCFRS-TKFYMFADDLKFFRKVNS 490
V+ ++ PV G PQGS GP +++ ++ + + + +ADDL + NS
Sbjct: 616 VIRSSSGTVEVPVTRGCPQGSISGPFIWDILMDVLLQRLQPYCQLSAYADDLLLLVEGNS 675
Query: 491 SLDSELLQRDLDSLF-GWCSANGMSLNISKCYVI 589
E L S+ W + G L+ SK ++
Sbjct: 676 RAVLEEKGAQLMSIVETWGAEVGDCLSTSKTVIM 709
>AY118706-1|AAM50566.1| 469|Drosophila melanogaster AT22075p
protein.
Length = 469
Score = 29.9 bits (64), Expect = 3.6
Identities = 16/59 (27%), Positives = 28/59 (47%)
Frame = +1
Query: 181 YSYLRVLVKRHVPKFVPRNNHSPIWFSSILIRTLKEKFNEQIVHGCCGGSLVDVLPSFV 357
+SYL R V + H+ IWF ++++ + ++ G GG + VLP F+
Sbjct: 81 FSYLMNRFGRKVSIYALAVPHTCIWFLFYFAQSIEWLYVARVFAGLTGGGMFVVLPIFI 139
>AE014134-1132|AAF52417.2| 451|Drosophila melanogaster CG13771-PA
protein.
Length = 451
Score = 29.9 bits (64), Expect = 3.6
Identities = 14/51 (27%), Positives = 25/51 (49%)
Frame = +1
Query: 187 YLRVLVKRHVPKFVPRNNHSPIWFSSILIRTLKEKFNEQIVHGCCGGSLVD 339
+L + VP+ +PR+ H +W+ + R +F E + H GS V+
Sbjct: 395 HLTYSCSKAVPEILPRSYHEALWY--LTGRRYFNRFRESVSHDMDNGSAVE 443
>AE014134-578|AAF51129.2| 469|Drosophila melanogaster CG15406-PA
protein.
Length = 469
Score = 29.9 bits (64), Expect = 3.6
Identities = 16/59 (27%), Positives = 28/59 (47%)
Frame = +1
Query: 181 YSYLRVLVKRHVPKFVPRNNHSPIWFSSILIRTLKEKFNEQIVHGCCGGSLVDVLPSFV 357
+SYL R V + H+ IWF ++++ + ++ G GG + VLP F+
Sbjct: 81 FSYLMNRFGRKVSIYALAVPHTCIWFLFYFAQSIEWLYVARVFAGLTGGGMFVVLPIFI 139
>AY567998-1|AAT71306.1| 486|Drosophila melanogaster odorant
receptor Or83b protein.
Length = 486
Score = 29.5 bits (63), Expect = 4.7
Identities = 18/71 (25%), Positives = 32/71 (45%), Gaps = 2/71 (2%)
Frame = +2
Query: 389 LLFNAFINDIGSCFRSTKFYMFADDLKFF--RKVNSSLDSELLQRDLDSLFGWCSANGMS 562
L F + + S T F D +K + NSS+ E+ + + S + W +++GM
Sbjct: 135 LFFLVMLTIVASATAWTTITFFGDSVKMVVDHETNSSIPVEIPRLPIKSFYPWNASHGMF 194
Query: 563 LNISKCYVIRF 595
IS + I +
Sbjct: 195 YMISFAFQIYY 205
>M84795-1|AAA28307.1| 455|Drosophila melanogaster 60A protein
protein.
Length = 455
Score = 28.7 bits (61), Expect = 8.2
Identities = 18/49 (36%), Positives = 24/49 (48%)
Frame = -2
Query: 685 SHPRSLIESTSDSGAPLI*YVRENERLFSSKTNYIAFTDIQTHAIRTAP 539
SHPR +S S + PL+ E+ R +T YI F D+ H AP
Sbjct: 328 SHPRKRKKSVSPNNVPLL-EPMESTRSCQMQTLYIDFKDLGWHDWIIAP 375
>M77012-1|AAA28306.1| 455|Drosophila melanogaster 60A protein.
Length = 455
Score = 28.7 bits (61), Expect = 8.2
Identities = 18/49 (36%), Positives = 24/49 (48%)
Frame = -2
Query: 685 SHPRSLIESTSDSGAPLI*YVRENERLFSSKTNYIAFTDIQTHAIRTAP 539
SHPR +S S + PL+ E+ R +T YI F D+ H AP
Sbjct: 328 SHPRKRKKSVSPNNVPLL-EPMESTRSCQMQTLYIDFKDLGWHDWIIAP 375
>AE013599-3701|AAF47075.1| 455|Drosophila melanogaster CG5562-PA
protein.
Length = 455
Score = 28.7 bits (61), Expect = 8.2
Identities = 18/49 (36%), Positives = 24/49 (48%)
Frame = -2
Query: 685 SHPRSLIESTSDSGAPLI*YVRENERLFSSKTNYIAFTDIQTHAIRTAP 539
SHPR +S S + PL+ E+ R +T YI F D+ H AP
Sbjct: 328 SHPRKRKKSVSPNNVPLL-EPMESTRSCQMQTLYIDFKDLGWHDWIIAP 375
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 32,122,418
Number of Sequences: 53049
Number of extensions: 656885
Number of successful extensions: 1637
Number of sequences better than 10.0: 35
Number of HSP's better than 10.0 without gapping: 1572
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1633
length of database: 24,988,368
effective HSP length: 83
effective length of database: 20,585,301
effective search space used: 3149551053
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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