Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= brS-1121
         (535 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF457547-1|AAL68777.1|  163|Anopheles gambiae selenoprotein prot...    25   2.1  
AY301275-1|AAQ67361.1|  611|Anopheles gambiae G-protein coupled ...    23   6.4  
AJ439353-2|CAD27924.1|  612|Anopheles gambiae putative G-protein...    23   6.4  

>AF457547-1|AAL68777.1|  163|Anopheles gambiae selenoprotein
           protein.
          Length = 163

 Score = 24.6 bits (51), Expect = 2.1
 Identities = 12/20 (60%), Positives = 13/20 (65%)
 Frame = -3

Query: 167 VTKLLEIKYTNTDTVQEFQE 108
           V + L I   NTDTVQEF E
Sbjct: 127 VKETLSINKWNTDTVQEFFE 146


>AY301275-1|AAQ67361.1|  611|Anopheles gambiae G-protein coupled
           receptor protein.
          Length = 611

 Score = 23.0 bits (47), Expect = 6.4
 Identities = 9/19 (47%), Positives = 14/19 (73%)
 Frame = +3

Query: 225 FSLVFLFLIALSVYLFIYL 281
           F+LVF+F+I L + +  YL
Sbjct: 352 FTLVFMFIIPLLILIGTYL 370


>AJ439353-2|CAD27924.1|  612|Anopheles gambiae putative G-protein
           coupled receptor protein.
          Length = 612

 Score = 23.0 bits (47), Expect = 6.4
 Identities = 9/19 (47%), Positives = 14/19 (73%)
 Frame = +3

Query: 225 FSLVFLFLIALSVYLFIYL 281
           F+LVF+F+I L + +  YL
Sbjct: 353 FTLVFMFIIPLLILIGTYL 371


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 370,375
Number of Sequences: 2352
Number of extensions: 4920
Number of successful extensions: 8
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8
length of database: 563,979
effective HSP length: 60
effective length of database: 422,859
effective search space used: 49474503
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)