Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= brS-1119
         (553 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292371-1|CAL23183.2|  350|Tribolium castaneum gustatory recept...    23   1.3  
AY884061-1|AAX84202.1|  717|Tribolium castaneum laccase 2A protein.    23   1.8  
AM292360-1|CAL23172.2|  427|Tribolium castaneum gustatory recept...    22   4.1  
AM292331-1|CAL23143.2|  437|Tribolium castaneum gustatory recept...    22   4.1  
DQ342040-1|ABC69932.1|  822|Tribolium castaneum STIP protein.          21   9.5  

>AM292371-1|CAL23183.2|  350|Tribolium castaneum gustatory receptor
           candidate 50 protein.
          Length = 350

 Score = 23.4 bits (48), Expect = 1.3
 Identities = 9/19 (47%), Positives = 11/19 (57%)
 Frame = +2

Query: 287 FNRCYSNAFNIDNLWHLQF 343
           F  CY + FN DNL  + F
Sbjct: 251 FYYCYDSGFNSDNLTDVYF 269



 Score = 21.4 bits (43), Expect = 5.4
 Identities = 11/23 (47%), Positives = 13/23 (56%)
 Frame = -2

Query: 471 FNYCYLSGFSNMKRNTTQYNTIK 403
           F YCY SGF N    T  Y T++
Sbjct: 251 FYYCYDSGF-NSDNLTDVYFTLQ 272


>AY884061-1|AAX84202.1|  717|Tribolium castaneum laccase 2A protein.
          Length = 717

 Score = 23.0 bits (47), Expect = 1.8
 Identities = 10/21 (47%), Positives = 13/21 (61%)
 Frame = -2

Query: 222 ALCI*STKNQLSVDSIILLNK 160
           A+C+   KN LS+D  IL  K
Sbjct: 467 AICVSQLKNALSIDKGILREK 487


>AM292360-1|CAL23172.2|  427|Tribolium castaneum gustatory receptor
           candidate 39 protein.
          Length = 427

 Score = 21.8 bits (44), Expect = 4.1
 Identities = 8/17 (47%), Positives = 11/17 (64%)
 Frame = +2

Query: 389 ELTLFLIVLYCVVLRFI 439
           E  LF+I  YC+ L +I
Sbjct: 312 EAGLFMIAFYCMTLLYI 328


>AM292331-1|CAL23143.2|  437|Tribolium castaneum gustatory receptor
           candidate 10 protein.
          Length = 437

 Score = 21.8 bits (44), Expect = 4.1
 Identities = 8/17 (47%), Positives = 11/17 (64%)
 Frame = +2

Query: 389 ELTLFLIVLYCVVLRFI 439
           E  LF+I  YC+ L +I
Sbjct: 312 EAGLFMIAFYCMTLLYI 328


>DQ342040-1|ABC69932.1|  822|Tribolium castaneum STIP protein.
          Length = 822

 Score = 20.6 bits (41), Expect = 9.5
 Identities = 8/14 (57%), Positives = 11/14 (78%)
 Frame = -2

Query: 534 KRTRYFQRS*DRVL 493
           K+TRY+ RS D V+
Sbjct: 237 KKTRYYYRSVDDVI 250


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 123,629
Number of Sequences: 336
Number of extensions: 2714
Number of successful extensions: 6
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6
length of database: 122,585
effective HSP length: 53
effective length of database: 104,777
effective search space used: 13621010
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)