Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= brS-1119
         (553 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BT021416-1|AAX33564.1|  887|Drosophila melanogaster LD05154p pro...    28   7.3  
AY684632-1|AAV80293.1|  886|Drosophila melanogaster lysosomal en...    28   7.3  
AE014297-4000|AAN14087.2|  887|Drosophila melanogaster CG31072-P...    28   7.3  
AE014297-3999|AAN14088.2|  886|Drosophila melanogaster CG31072-P...    28   7.3  
AY089215-1|AAL89953.1|  377|Drosophila melanogaster AT01633p pro...    28   9.7  

>BT021416-1|AAX33564.1|  887|Drosophila melanogaster LD05154p
           protein.
          Length = 887

 Score = 28.3 bits (60), Expect = 7.3
 Identities = 17/46 (36%), Positives = 24/46 (52%), Gaps = 5/46 (10%)
 Frame = +1

Query: 13  NGRLYVVSLSEAP-SLGTCFNRSEQTH----CDYTLNIFYLHITPY 135
           NG +++   S A    GT    + Q H    CDYTL+   +H+TPY
Sbjct: 130 NGNMFLKYKSGAKCDNGTADKPNYQLHVMFSCDYTLDAQPMHVTPY 175


>AY684632-1|AAV80293.1|  886|Drosophila melanogaster lysosomal
           enzyme receptor protein protein.
          Length = 886

 Score = 28.3 bits (60), Expect = 7.3
 Identities = 17/46 (36%), Positives = 24/46 (52%), Gaps = 5/46 (10%)
 Frame = +1

Query: 13  NGRLYVVSLSEAP-SLGTCFNRSEQTH----CDYTLNIFYLHITPY 135
           NG +++   S A    GT    + Q H    CDYTL+   +H+TPY
Sbjct: 129 NGNMFLKYKSGAKCDNGTADKPNYQLHVMFSCDYTLDAQPMHVTPY 174


>AE014297-4000|AAN14087.2|  887|Drosophila melanogaster CG31072-PB,
           isoform B protein.
          Length = 887

 Score = 28.3 bits (60), Expect = 7.3
 Identities = 17/46 (36%), Positives = 24/46 (52%), Gaps = 5/46 (10%)
 Frame = +1

Query: 13  NGRLYVVSLSEAP-SLGTCFNRSEQTH----CDYTLNIFYLHITPY 135
           NG +++   S A    GT    + Q H    CDYTL+   +H+TPY
Sbjct: 130 NGNMFLKYKSGAKCDNGTADKPNYQLHVMFSCDYTLDAQPMHVTPY 175


>AE014297-3999|AAN14088.2|  886|Drosophila melanogaster CG31072-PA,
           isoform A protein.
          Length = 886

 Score = 28.3 bits (60), Expect = 7.3
 Identities = 17/46 (36%), Positives = 24/46 (52%), Gaps = 5/46 (10%)
 Frame = +1

Query: 13  NGRLYVVSLSEAP-SLGTCFNRSEQTH----CDYTLNIFYLHITPY 135
           NG +++   S A    GT    + Q H    CDYTL+   +H+TPY
Sbjct: 129 NGNMFLKYKSGAKCDNGTADKPNYQLHVMFSCDYTLDAQPMHVTPY 174


>AY089215-1|AAL89953.1|  377|Drosophila melanogaster AT01633p
           protein.
          Length = 377

 Score = 27.9 bits (59), Expect = 9.7
 Identities = 12/20 (60%), Positives = 13/20 (65%)
 Frame = +3

Query: 27  CCFVE*SPISRNMLQSFRAN 86
           CC  E SPIS   L+SFR N
Sbjct: 279 CCHAEKSPISPENLESFRRN 298


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 20,844,937
Number of Sequences: 53049
Number of extensions: 388070
Number of successful extensions: 663
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 651
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 663
length of database: 24,988,368
effective HSP length: 81
effective length of database: 20,691,399
effective search space used: 2110522698
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)