Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= brS-1115
         (342 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BC033491-1|AAH33491.1|  583|Homo sapiens ADAD2 protein protein.        29   5.0  
AK131102-1|BAC85152.1|  288|Homo sapiens FLJ00337 protein protein.     29   5.0  
AK093046-1|BAC04032.1|  665|Homo sapiens protein ( Homo sapiens ...    29   5.0  
AF447586-1|AAM22869.1|  583|Homo sapiens unknown protein.              29   5.0  

>BC033491-1|AAH33491.1|  583|Homo sapiens ADAD2 protein protein.
          Length = 583

 Score = 28.7 bits (61), Expect = 5.0
 Identities = 13/32 (40%), Positives = 18/32 (56%)
 Frame = -3

Query: 166 EARHQKKLKSACYVVQSLDYIMSSNTASRPAL 71
           EA+ Q  L + CY+   L+   S  T+SRP L
Sbjct: 166 EAKQQAALSALCYIRSQLENPESPQTSSRPPL 197


>AK131102-1|BAC85152.1|  288|Homo sapiens FLJ00337 protein protein.
          Length = 288

 Score = 28.7 bits (61), Expect = 5.0
 Identities = 13/32 (40%), Positives = 18/32 (56%)
 Frame = -3

Query: 166 EARHQKKLKSACYVVQSLDYIMSSNTASRPAL 71
           EA+ Q  L + CY+   L+   S  T+SRP L
Sbjct: 103 EAKQQAALSALCYIRSQLENPESPQTSSRPPL 134


>AK093046-1|BAC04032.1|  665|Homo sapiens protein ( Homo sapiens
           cDNA FLJ35727 fis, clone TESTI2003020, weakly similar to
           DOUBLE-STRANDED RNA-SPECIFIC EDITASE 1 (EC 3.5.-.-). ).
          Length = 665

 Score = 28.7 bits (61), Expect = 5.0
 Identities = 13/32 (40%), Positives = 18/32 (56%)
 Frame = -3

Query: 166 EARHQKKLKSACYVVQSLDYIMSSNTASRPAL 71
           EA+ Q  L + CY+   L+   S  T+SRP L
Sbjct: 238 EAKQQAALSALCYIRSQLENPESPQTSSRPPL 269


>AF447586-1|AAM22869.1|  583|Homo sapiens unknown protein.
          Length = 583

 Score = 28.7 bits (61), Expect = 5.0
 Identities = 13/32 (40%), Positives = 18/32 (56%)
 Frame = -3

Query: 166 EARHQKKLKSACYVVQSLDYIMSSNTASRPAL 71
           EA+ Q  L + CY+   L+   S  T+SRP L
Sbjct: 166 EAKQQAALSALCYIRSQLENPESPQTSSRPPL 197


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 52,917,306
Number of Sequences: 237096
Number of extensions: 1087557
Number of successful extensions: 2250
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 2176
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2249
length of database: 76,859,062
effective HSP length: 80
effective length of database: 57,891,382
effective search space used: 1910415606
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)