Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= brS-1115
         (342 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BT011143-1|AAR82811.1| 1373|Drosophila melanogaster GM01721p pro...    27   6.4  
AE014296-3088|AAN11663.1|  474|Drosophila melanogaster CG32204-P...    27   8.4  

>BT011143-1|AAR82811.1| 1373|Drosophila melanogaster GM01721p
           protein.
          Length = 1373

 Score = 27.1 bits (57), Expect = 6.4
 Identities = 10/26 (38%), Positives = 18/26 (69%)
 Frame = +1

Query: 112 LNFGPHNMLILIFFGVEPPPAPRDKT 189
           L FGPH+M+IL ++ V+   A  +++
Sbjct: 13  LQFGPHDMVILRYYDVQAHSAAEEES 38


>AE014296-3088|AAN11663.1|  474|Drosophila melanogaster CG32204-PA
           protein.
          Length = 474

 Score = 26.6 bits (56), Expect = 8.4
 Identities = 13/32 (40%), Positives = 17/32 (53%)
 Frame = -2

Query: 107 HYEFEYRLSSRPASADRGQRHKRQPSRPAHCA 12
           H E E+  S R      GQR +R+P R  +CA
Sbjct: 421 HLEPEWPKSYRRGGQCCGQRQRRRPLRRVYCA 452


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,499,378
Number of Sequences: 53049
Number of extensions: 357537
Number of successful extensions: 999
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 971
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 999
length of database: 24,988,368
effective HSP length: 75
effective length of database: 21,009,693
effective search space used: 798368334
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)