Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= brS-1111
(666 letters)
Database: tribolium
336 sequences; 122,585 total letters
Searching.......................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY887136-1|AAW78361.1| 580|Tribolium castaneum vasa RNA helicas... 116 1e-28
AY800247-1|AAV66724.1| 790|Tribolium castaneum pangolin protein. 25 0.74
AY800246-1|AAV66723.1| 682|Tribolium castaneum pangolin protein. 25 0.74
AY295880-2|AAQ62694.1| 1558|Tribolium castaneum chitin synthase ... 25 0.74
AY295880-1|AAQ62693.1| 1558|Tribolium castaneum chitin synthase ... 25 0.74
AY291476-1|AAQ55060.1| 1558|Tribolium castaneum chitin synthase ... 25 0.74
AY291475-1|AAQ55059.1| 1558|Tribolium castaneum chitin synthase ... 25 0.74
AY316682-1|AAQ83696.1| 456|Tribolium castaneum Sp-like zinc fin... 24 0.97
DQ855503-1|ABH88190.1| 124|Tribolium castaneum chemosensory pro... 23 2.2
AY884062-1|AAX84203.1| 712|Tribolium castaneum laccase 2B protein. 23 2.2
AY884061-1|AAX84202.1| 717|Tribolium castaneum laccase 2A protein. 23 2.2
DQ855498-1|ABH88185.1| 127|Tribolium castaneum chemosensory pro... 23 3.0
AM292330-1|CAL23142.2| 408|Tribolium castaneum gustatory recept... 23 3.0
AJ973445-1|CAJ01492.1| 127|Tribolium castaneum hypothetical pro... 23 3.0
DQ855502-1|ABH88189.1| 126|Tribolium castaneum chemosensory pro... 21 6.9
DQ855500-1|ABH88187.1| 126|Tribolium castaneum chemosensory pro... 21 6.9
DQ855495-1|ABH88182.1| 126|Tribolium castaneum chemosensory pro... 21 6.9
DQ414248-1|ABD63010.2| 311|Tribolium castaneum sloppy-paired pr... 21 6.9
AF260820-1|AAG02018.1| 139|Tribolium castaneum alpha-esterase l... 21 6.9
EU019711-1|ABU25223.1| 534|Tribolium castaneum chitin deacetyla... 21 9.1
AY584475-1|AAS93634.1| 209|Tribolium castaneum homothorax protein. 21 9.1
AJ518941-1|CAD57735.1| 456|Tribolium castaneum homothorax protein. 21 9.1
>AY887136-1|AAW78361.1| 580|Tribolium castaneum vasa RNA helicase
protein.
Length = 580
Score = 116 bits (280), Expect = 1e-28
Identities = 66/202 (32%), Positives = 108/202 (53%), Gaps = 13/202 (6%)
Frame = +3
Query: 96 VETFDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKTATFSISI 275
+ +F+ L+ LL + G+ KP+AIQ+ AI + GRD+++ AQ+G+GKTA F + I
Sbjct: 157 ITSFETSGLRPHLLENVKKSGYTKPTAIQKYAIPVILSGRDLMSCAQTGSGKTAAFMLPI 216
Query: 276 LQQI---------DTSIRECQALILAPTRELAQQIQKVVIALGDHLNAKCHACIGGTNVR 428
+ + + + + +I++PTRELA QI + K GGT+
Sbjct: 217 IHNLLSDKNPPNTENNCAQPVVVIMSPTRELAIQIADQGKKFAYNSTVKVAVIYGGTSTN 276
Query: 429 EDIRQLESGVHVVVGTPGRVYDMITRRALHANTIKLFVLDEADEMLSRGFKDQIHDVFKM 608
++ G H++V TPGR+ D + R + N++K FVLDEAD ML GF + ++
Sbjct: 277 HQRGRILGGCHILVATPGRLKDFVNRGNVSFNSLKYFVLDEADRMLDMGFLGDVEEMLSH 336
Query: 609 LS----ADVQVILLSATMPDDV 662
S + Q ++ SAT P++V
Sbjct: 337 QSMPATGERQTLMFSATFPEEV 358
>AY800247-1|AAV66724.1| 790|Tribolium castaneum pangolin protein.
Length = 790
Score = 24.6 bits (51), Expect = 0.74
Identities = 7/9 (77%), Positives = 7/9 (77%)
Frame = -1
Query: 471 PPPHEHHSP 445
PPPH HH P
Sbjct: 737 PPPHPHHQP 745
>AY800246-1|AAV66723.1| 682|Tribolium castaneum pangolin protein.
Length = 682
Score = 24.6 bits (51), Expect = 0.74
Identities = 7/9 (77%), Positives = 7/9 (77%)
Frame = -1
Query: 471 PPPHEHHSP 445
PPPH HH P
Sbjct: 629 PPPHPHHQP 637
>AY295880-2|AAQ62694.1| 1558|Tribolium castaneum chitin synthase
variant 2 protein.
Length = 1558
Score = 24.6 bits (51), Expect = 0.74
Identities = 12/35 (34%), Positives = 16/35 (45%)
Frame = +2
Query: 269 IDSTTNRYKHS*MSSFDPGSHKRAGPTNSEGGDSS 373
ID + + + MS+ G H G EGGD S
Sbjct: 1155 IDPSGHISRRRSMSASSRGDHHHLGAVTEEGGDES 1189
>AY295880-1|AAQ62693.1| 1558|Tribolium castaneum chitin synthase
variant 1 protein.
Length = 1558
Score = 24.6 bits (51), Expect = 0.74
Identities = 12/35 (34%), Positives = 16/35 (45%)
Frame = +2
Query: 269 IDSTTNRYKHS*MSSFDPGSHKRAGPTNSEGGDSS 373
ID + + + MS+ G H G EGGD S
Sbjct: 1155 IDPSGHISRRRSMSASSRGDHHHLGAVTEEGGDES 1189
>AY291476-1|AAQ55060.1| 1558|Tribolium castaneum chitin synthase CHS1B
protein.
Length = 1558
Score = 24.6 bits (51), Expect = 0.74
Identities = 12/35 (34%), Positives = 16/35 (45%)
Frame = +2
Query: 269 IDSTTNRYKHS*MSSFDPGSHKRAGPTNSEGGDSS 373
ID + + + MS+ G H G EGGD S
Sbjct: 1155 IDPSGHISRRRSMSASSRGDHHHLGAVTEEGGDES 1189
>AY291475-1|AAQ55059.1| 1558|Tribolium castaneum chitin synthase CHS1A
protein.
Length = 1558
Score = 24.6 bits (51), Expect = 0.74
Identities = 12/35 (34%), Positives = 16/35 (45%)
Frame = +2
Query: 269 IDSTTNRYKHS*MSSFDPGSHKRAGPTNSEGGDSS 373
ID + + + MS+ G H G EGGD S
Sbjct: 1155 IDPSGHISRRRSMSASSRGDHHHLGAVTEEGGDES 1189
>AY316682-1|AAQ83696.1| 456|Tribolium castaneum Sp-like zinc finger
protein protein.
Length = 456
Score = 24.2 bits (50), Expect = 0.97
Identities = 13/48 (27%), Positives = 23/48 (47%)
Frame = -2
Query: 446 QLANIFTDIGATNASMAFSIQVITKSYHHLLNLLGQLSCGSQDQSLTF 303
Q+AN TD + S+A S +++ H L + + G+Q +F
Sbjct: 207 QMANYSTDYSSLTHSLAASNHLLSSGQHLLQDTYKSMLPGAQTVGASF 254
>DQ855503-1|ABH88190.1| 124|Tribolium castaneum chemosensory
protein 17 protein.
Length = 124
Score = 23.0 bits (47), Expect = 2.2
Identities = 7/17 (41%), Positives = 10/17 (58%)
Frame = +2
Query: 410 WWHQCP*RYSPTGEWCS 460
WW + +Y P GE+ S
Sbjct: 96 WWQELQEKYDPKGEYKS 112
>AY884062-1|AAX84203.1| 712|Tribolium castaneum laccase 2B protein.
Length = 712
Score = 23.0 bits (47), Expect = 2.2
Identities = 7/19 (36%), Positives = 11/19 (57%)
Frame = +2
Query: 320 PGSHKRAGPTNSEGGDSSW 376
PG+ K+ GP + +SW
Sbjct: 28 PGAKKKVGPIDQSAAAASW 46
>AY884061-1|AAX84202.1| 717|Tribolium castaneum laccase 2A protein.
Length = 717
Score = 23.0 bits (47), Expect = 2.2
Identities = 7/19 (36%), Positives = 11/19 (57%)
Frame = +2
Query: 320 PGSHKRAGPTNSEGGDSSW 376
PG+ K+ GP + +SW
Sbjct: 28 PGAKKKVGPIDQSAAAASW 46
>DQ855498-1|ABH88185.1| 127|Tribolium castaneum chemosensory
protein 12 protein.
Length = 127
Score = 22.6 bits (46), Expect = 3.0
Identities = 6/13 (46%), Positives = 9/13 (69%)
Frame = +2
Query: 410 WWHQCP*RYSPTG 448
WW++ +Y PTG
Sbjct: 98 WWNELEAKYDPTG 110
>AM292330-1|CAL23142.2| 408|Tribolium castaneum gustatory receptor
candidate 9 protein.
Length = 408
Score = 22.6 bits (46), Expect = 3.0
Identities = 9/18 (50%), Positives = 10/18 (55%)
Frame = +3
Query: 354 QKVVIALGDHLNAKCHAC 407
+K IAL D N CH C
Sbjct: 261 EKSWIALNDDYNRLCHLC 278
>AJ973445-1|CAJ01492.1| 127|Tribolium castaneum hypothetical
protein protein.
Length = 127
Score = 22.6 bits (46), Expect = 3.0
Identities = 6/13 (46%), Positives = 9/13 (69%)
Frame = +2
Query: 410 WWHQCP*RYSPTG 448
WW++ +Y PTG
Sbjct: 98 WWNELEAKYDPTG 110
>DQ855502-1|ABH88189.1| 126|Tribolium castaneum chemosensory
protein 16 protein.
Length = 126
Score = 21.4 bits (43), Expect = 6.9
Identities = 5/16 (31%), Positives = 10/16 (62%)
Frame = +2
Query: 407 HWWHQCP*RYSPTGEW 454
+WW + ++ P GE+
Sbjct: 96 NWWQELESKFDPQGEY 111
>DQ855500-1|ABH88187.1| 126|Tribolium castaneum chemosensory
protein 14 protein.
Length = 126
Score = 21.4 bits (43), Expect = 6.9
Identities = 5/16 (31%), Positives = 10/16 (62%)
Frame = +2
Query: 407 HWWHQCP*RYSPTGEW 454
+WW + ++ P GE+
Sbjct: 96 NWWQELEAKFDPKGEY 111
>DQ855495-1|ABH88182.1| 126|Tribolium castaneum chemosensory
protein 9 protein.
Length = 126
Score = 21.4 bits (43), Expect = 6.9
Identities = 5/16 (31%), Positives = 10/16 (62%)
Frame = +2
Query: 407 HWWHQCP*RYSPTGEW 454
+WW + ++ P GE+
Sbjct: 96 NWWQELESKFDPQGEY 111
>DQ414248-1|ABD63010.2| 311|Tribolium castaneum sloppy-paired
protein.
Length = 311
Score = 21.4 bits (43), Expect = 6.9
Identities = 7/17 (41%), Positives = 11/17 (64%)
Frame = -1
Query: 57 FPEVHRNYLDPSMAHFW 7
F +V R+Y DP ++W
Sbjct: 141 FVKVPRHYDDPGKGNYW 157
>AF260820-1|AAG02018.1| 139|Tribolium castaneum alpha-esterase like
protein E1 protein.
Length = 139
Score = 21.4 bits (43), Expect = 6.9
Identities = 9/37 (24%), Positives = 20/37 (54%)
Frame = -2
Query: 128 FFEVHVIEGFDNLIPVGVKCPRVHSRRSIVTTLILRW 18
FF+ ++I G +N + + V + + + +T +L W
Sbjct: 43 FFKKNLIVGSENCLVLNVYTKNLRTDTNRITQPVLFW 79
>EU019711-1|ABU25223.1| 534|Tribolium castaneum chitin deacetylase
1 protein.
Length = 534
Score = 21.0 bits (42), Expect = 9.1
Identities = 6/14 (42%), Positives = 9/14 (64%)
Frame = -1
Query: 459 EHHSPVGEYLHGHW 418
E+ +P+G Y H W
Sbjct: 415 ENRAPLGLYFHAAW 428
>AY584475-1|AAS93634.1| 209|Tribolium castaneum homothorax protein.
Length = 209
Score = 21.0 bits (42), Expect = 9.1
Identities = 9/16 (56%), Positives = 9/16 (56%)
Frame = +1
Query: 31 KVVTMDLREWTLGHLT 78
KV T LR W HLT
Sbjct: 187 KVATNILRAWLFQHLT 202
>AJ518941-1|CAD57735.1| 456|Tribolium castaneum homothorax protein.
Length = 456
Score = 21.0 bits (42), Expect = 9.1
Identities = 9/16 (56%), Positives = 9/16 (56%)
Frame = +1
Query: 31 KVVTMDLREWTLGHLT 78
KV T LR W HLT
Sbjct: 343 KVATNILRAWLFQHLT 358
Database: tribolium
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 122,585
Number of sequences in database: 336
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 175,353
Number of Sequences: 336
Number of extensions: 4086
Number of successful extensions: 25
Number of sequences better than 10.0: 22
Number of HSP's better than 10.0 without gapping: 24
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 24
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 17281430
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -