Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= brS-1111
(666 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z12116-1|CAA78102.1| 402|Caenorhabditis elegans protein ( C.ele... 297 6e-81
U13876-3|AAA21170.1| 402|Caenorhabditis elegans Initiation fact... 297 6e-81
AF039720-12|AAB96704.1| 399|Caenorhabditis elegans Hypothetical... 284 3e-77
AC024844-2|AAK29954.2| 399|Caenorhabditis elegans Hypothetical ... 284 3e-77
U13876-12|AAA21169.1| 363|Caenorhabditis elegans Hypothetical p... 174 5e-44
AC006605-1|AAK85443.1| 430|Caenorhabditis elegans Conserved ger... 157 9e-39
Z54327-7|CAD57690.1| 268|Caenorhabditis elegans Hypothetical pr... 124 4e-29
Z54327-6|CAA91120.1| 425|Caenorhabditis elegans Hypothetical pr... 124 4e-29
AC006665-5|AAF39907.1| 630|Caenorhabditis elegans Hypothetical ... 124 6e-29
AC024876-4|AAU05555.1| 825|Caenorhabditis elegans Hypothetical ... 124 8e-29
AC024876-3|AAU05556.1| 871|Caenorhabditis elegans Hypothetical ... 124 8e-29
AC006661-5|AAF39890.2| 488|Caenorhabditis elegans Hypothetical ... 122 2e-28
AC006661-4|ABB88208.1| 561|Caenorhabditis elegans Hypothetical ... 122 2e-28
Z29115-1|CAA82362.1| 489|Caenorhabditis elegans Hypothetical pr... 118 5e-27
U08102-1|AAB65852.1| 417|Caenorhabditis elegans putative RNA he... 118 5e-27
EU051652-1|ABS85191.1| 973|Caenorhabditis elegans MEL-46 protein. 118 5e-27
CU457744-1|CAM36366.2| 973|Caenorhabditis elegans Hypothetical ... 118 5e-27
Z81555-7|CAB04518.1| 561|Caenorhabditis elegans Hypothetical pr... 116 2e-26
AF045641-1|AAK68386.1| 970|Caenorhabditis elegans Hypothetical ... 113 8e-26
U13070-1|AAK67224.1| 730|Caenorhabditis elegans Hypothetical pr... 111 6e-25
AC024753-1|AAF60456.1| 732|Caenorhabditis elegans Hypothetical ... 111 6e-25
Z50071-3|CAA90407.1| 613|Caenorhabditis elegans Hypothetical pr... 110 7e-25
Z50071-2|CAA90406.1| 638|Caenorhabditis elegans Hypothetical pr... 110 7e-25
Z50071-1|CAA90408.1| 1022|Caenorhabditis elegans Hypothetical pr... 110 7e-25
AC025726-23|AAK73934.1| 763|Caenorhabditis elegans Hypothetical... 109 1e-24
AF025451-3|AAB71200.2| 634|Caenorhabditis elegans Hypothetical ... 108 4e-24
AC024810-3|AAU20831.1| 660|Caenorhabditis elegans Vasa- and bel... 100 1e-21
AC024810-2|AAK68520.1| 644|Caenorhabditis elegans Vasa- and bel... 100 1e-21
AC024810-1|AAF60764.1| 641|Caenorhabditis elegans Vasa- and bel... 100 1e-21
AL034488-3|CAA22456.1| 504|Caenorhabditis elegans Hypothetical ... 99 2e-21
AF067608-1|AAC17654.2| 544|Caenorhabditis elegans Hypothetical ... 96 2e-20
AC024859-14|AAY43989.1| 643|Caenorhabditis elegans Hypothetical... 96 2e-20
U62772-1|AAB04136.1| 763|Caenorhabditis elegans RNA helicase pr... 95 3e-20
L19948-1|AAC27384.1| 763|Caenorhabditis elegans RNA helicase pr... 95 3e-20
AF000197-1|AAB52901.2| 763|Caenorhabditis elegans Germ-line hel... 95 3e-20
Z81449-4|CAB03765.1| 811|Caenorhabditis elegans Hypothetical pr... 92 4e-19
U60449-1|AAB03510.1| 974|Caenorhabditis elegans GLH-2 protein. 91 5e-19
U60194-1|AAB03337.1| 974|Caenorhabditis elegans RNA helicase GL... 91 5e-19
AC006625-11|AAK68269.1| 974|Caenorhabditis elegans Germ-line he... 91 5e-19
AF079509-1|AAC28388.1| 720|Caenorhabditis elegans germline RNA ... 88 6e-18
AF003145-4|AAB57719.1| 720|Caenorhabditis elegans Germ-line hel... 88 6e-18
Z22177-1|CAA80151.1| 578|Caenorhabditis elegans Hypothetical pr... 79 2e-15
AF079508-1|AAC28387.1| 1156|Caenorhabditis elegans germline RNA ... 77 1e-14
AF039718-2|AAB96745.2| 1156|Caenorhabditis elegans Germ-line hel... 77 1e-14
U80447-1|AAB37806.1| 746|Caenorhabditis elegans Hypothetical pr... 75 3e-14
AC024830-10|AAF59610.3| 728|Caenorhabditis elegans Hypothetical... 73 1e-13
Z81094-7|CAB03153.2| 960|Caenorhabditis elegans Hypothetical pr... 72 4e-13
AF025451-4|AAL16306.1| 567|Caenorhabditis elegans Hypothetical ... 71 1e-12
U80447-2|AAO38637.1| 579|Caenorhabditis elegans Hypothetical pr... 70 1e-12
Z75546-3|CAA99891.1| 581|Caenorhabditis elegans Hypothetical pr... 58 4e-09
L17337-1|AAP68928.1| 593|Caenorhabditis elegans Hypothetical pr... 54 1e-07
AF125963-6|AAK95885.1| 520|Caenorhabditis elegans Hypothetical ... 36 0.026
AL110485-3|CAB60351.1| 2145|Caenorhabditis elegans Hypothetical ... 36 0.034
AL132948-1|CAC51077.1| 735|Caenorhabditis elegans Hypothetical ... 33 0.14
U53141-4|AAA96106.1| 528|Caenorhabditis elegans Mutator protein... 33 0.18
AF003740-7|AAC48142.2| 625|Caenorhabditis elegans Hypothetical ... 32 0.32
U64840-7|AAB04965.1| 340|Caenorhabditis elegans Hypothetical pr... 31 0.73
Z83123-10|CAB05609.2| 988|Caenorhabditis elegans Hypothetical p... 29 2.2
AY095296-1|AAM26298.1| 988|Caenorhabditis elegans RecQ helicase... 29 2.2
U80437-18|AAB37629.1| 518|Caenorhabditis elegans Cell division ... 29 3.9
U20864-1|AAC46663.1| 243|Caenorhabditis elegans Hypothetical pr... 29 3.9
AF480439-1|AAM76083.1| 1037|Caenorhabditis elegans dicer-related... 29 3.9
AF036696-4|AAB88350.1| 1037|Caenorhabditis elegans Dicer related... 29 3.9
AF039715-5|AAB96730.1| 391|Caenorhabditis elegans Hypothetical ... 28 6.8
Z48544-1|CAA88435.1| 473|Caenorhabditis elegans Hypothetical pr... 27 9.1
U61947-10|AAB03132.1| 932|Caenorhabditis elegans Kinesin-like p... 27 9.1
AY211948-1|AAO34669.1| 932|Caenorhabditis elegans kinesin-like ... 27 9.1
AL132876-20|CAD92404.1| 1127|Caenorhabditis elegans Hypothetical... 27 9.1
AL132876-19|CAD21673.1| 1161|Caenorhabditis elegans Hypothetical... 27 9.1
AC006792-2|AAF60742.3| 406|Caenorhabditis elegans Hypothetical ... 27 9.1
AB033538-1|BAB19356.2| 930|Caenorhabditis elegans kinesin like ... 27 9.1
>Z12116-1|CAA78102.1| 402|Caenorhabditis elegans protein (
C.elegans mRNA for eIF-4A homologue. ).
Length = 402
Score = 297 bits (728), Expect = 6e-81
Identities = 142/200 (71%), Positives = 171/200 (85%)
Frame = +3
Query: 66 GTLDTDWDQVVETFDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQSGT 245
G ++ ++DQVVE+FDDM LKEELLRGIY +GFEKPSAIQ+RAI+PC G+DVIAQAQSGT
Sbjct: 18 GLIEGNYDQVVESFDDMELKEELLRGIYGFGFEKPSAIQKRAIVPCTTGKDVIAQAQSGT 77
Query: 246 GKTATFSISILQQIDTSIRECQALILAPTRELAQQIQKVVIALGDHLNAKCHACIGGTNV 425
GKTATFS+SILQ+ID QAL++APTRELAQQIQKV+ ALG++LN CIGGT+V
Sbjct: 78 GKTATFSVSILQRIDHEDPHVQALVMAPTRELAQQIQKVMSALGEYLNVNILPCIGGTSV 137
Query: 426 REDIRQLESGVHVVVGTPGRVYDMITRRALHANTIKLFVLDEADEMLSRGFKDQIHDVFK 605
R+D R+LE+G+HVVVGTPGRV DMI R AL + IK+FVLDEADEMLSRGFKDQI++VF+
Sbjct: 138 RDDQRKLEAGIHVVVGTPGRVGDMINRNALDTSRIKMFVLDEADEMLSRGFKDQIYEVFR 197
Query: 606 MLSADVQVILLSATMPDDVL 665
+ DVQV+LLSATMP +VL
Sbjct: 198 SMPQDVQVVLLSATMPSEVL 217
>U13876-3|AAA21170.1| 402|Caenorhabditis elegans Initiation factor
protein 1, isoforma protein.
Length = 402
Score = 297 bits (728), Expect = 6e-81
Identities = 142/200 (71%), Positives = 171/200 (85%)
Frame = +3
Query: 66 GTLDTDWDQVVETFDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQSGT 245
G ++ ++DQVVE+FDDM LKEELLRGIY +GFEKPSAIQ+RAI+PC G+DVIAQAQSGT
Sbjct: 18 GLIEGNYDQVVESFDDMELKEELLRGIYGFGFEKPSAIQKRAIVPCTTGKDVIAQAQSGT 77
Query: 246 GKTATFSISILQQIDTSIRECQALILAPTRELAQQIQKVVIALGDHLNAKCHACIGGTNV 425
GKTATFS+SILQ+ID QAL++APTRELAQQIQKV+ ALG++LN CIGGT+V
Sbjct: 78 GKTATFSVSILQRIDHEDPHVQALVMAPTRELAQQIQKVMSALGEYLNVNILPCIGGTSV 137
Query: 426 REDIRQLESGVHVVVGTPGRVYDMITRRALHANTIKLFVLDEADEMLSRGFKDQIHDVFK 605
R+D R+LE+G+HVVVGTPGRV DMI R AL + IK+FVLDEADEMLSRGFKDQI++VF+
Sbjct: 138 RDDQRKLEAGIHVVVGTPGRVGDMINRNALDTSRIKMFVLDEADEMLSRGFKDQIYEVFR 197
Query: 606 MLSADVQVILLSATMPDDVL 665
+ DVQV+LLSATMP +VL
Sbjct: 198 SMPQDVQVVLLSATMPSEVL 217
>AF039720-12|AAB96704.1| 399|Caenorhabditis elegans Hypothetical
protein F33D11.10 protein.
Length = 399
Score = 284 bits (697), Expect = 3e-77
Identities = 132/191 (69%), Positives = 162/191 (84%)
Frame = +3
Query: 93 VVETFDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKTATFSIS 272
V+ TFD M L+E+LLRGIYAYGFEKPSAIQQRA+ ++ RDVIAQAQSGTGKTATFSIS
Sbjct: 24 VIPTFDKMGLREDLLRGIYAYGFEKPSAIQQRAVPAILKARDVIAQAQSGTGKTATFSIS 83
Query: 273 ILQQIDTSIRECQALILAPTRELAQQIQKVVIALGDHLNAKCHACIGGTNVREDIRQLES 452
+LQ +DT +RE QALIL+PTRELA QIQKVV+ALGD++N +CHACIGGTN+ EDIR+L+
Sbjct: 84 VLQSLDTQVRETQALILSPTRELAVQIQKVVLALGDYMNVQCHACIGGTNLGEDIRKLDY 143
Query: 453 GVHVVVGTPGRVYDMITRRALHANTIKLFVLDEADEMLSRGFKDQIHDVFKMLSADVQVI 632
G HVV GTPGRV+DMI RR L IKL VLDEADEML++GFK+Q++D+++ L QV+
Sbjct: 144 GQHVVSGTPGRVFDMIRRRNLRTRAIKLLVLDEADEMLNKGFKEQLYDIYRYLPPGAQVV 203
Query: 633 LLSATMPDDVL 665
LLSAT+P ++L
Sbjct: 204 LLSATLPHEIL 214
>AC024844-2|AAK29954.2| 399|Caenorhabditis elegans Hypothetical
protein Y65B4A.6 protein.
Length = 399
Score = 284 bits (697), Expect = 3e-77
Identities = 132/191 (69%), Positives = 162/191 (84%)
Frame = +3
Query: 93 VVETFDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKTATFSIS 272
++ TFD M L+E+LLRGIYAYGFEKPSAIQQRAI ++ RDVIAQAQSGTGKTATFSIS
Sbjct: 24 IIPTFDKMGLREDLLRGIYAYGFEKPSAIQQRAIPAILKARDVIAQAQSGTGKTATFSIS 83
Query: 273 ILQQIDTSIRECQALILAPTRELAQQIQKVVIALGDHLNAKCHACIGGTNVREDIRQLES 452
+LQ +DT +RE QALIL+PTRELA QIQKVV+ALGD++N +CHACIGGTN+ EDIR+L+
Sbjct: 84 VLQSLDTQVRETQALILSPTRELAVQIQKVVLALGDYMNVQCHACIGGTNLGEDIRKLDY 143
Query: 453 GVHVVVGTPGRVYDMITRRALHANTIKLFVLDEADEMLSRGFKDQIHDVFKMLSADVQVI 632
G HVV GTPGRV+DMI RR L IKL VLDEADEML++GFK+Q++D+++ L QV+
Sbjct: 144 GQHVVSGTPGRVFDMIRRRNLRTRAIKLLVLDEADEMLNKGFKEQLYDIYRYLPPGAQVV 203
Query: 633 LLSATMPDDVL 665
LLSAT+P ++L
Sbjct: 204 LLSATLPHEIL 214
>U13876-12|AAA21169.1| 363|Caenorhabditis elegans Hypothetical
protein F57B9.3 protein.
Length = 363
Score = 174 bits (423), Expect = 5e-44
Identities = 92/184 (50%), Positives = 123/184 (66%)
Frame = +3
Query: 114 MNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKTATFSISILQQIDT 293
M LKEELLRGIY +GFEKPSAIQ+ A+ PC G+DV Q+Q+G+GKT I ILQ ID
Sbjct: 1 MELKEELLRGIYGFGFEKPSAIQKSAVAPCTTGKDVTIQSQAGSGKTVISLIDILQGIDC 60
Query: 294 SIRECQALILAPTRELAQQIQKVVIALGDHLNAKCHACIGGTNVREDIRQLESGVHVVVG 473
Q ++LAP R +AQ+ + + +LG +LN C+G E+ + HV++G
Sbjct: 61 EDAHLQVILLAPQRGMAQRAHEQLKSLGRNLNVNA-TCLGFDTTAEN----DKISHVLMG 115
Query: 474 TPGRVYDMITRRALHANTIKLFVLDEADEMLSRGFKDQIHDVFKMLSADVQVILLSATMP 653
TP D ++ + IK+FVLDEADEMLS+GFKDQI++VF+ + DVQV+LLSATMP
Sbjct: 116 TP---KDFLSNIPSDTSRIKMFVLDEADEMLSKGFKDQIYEVFRSMPQDVQVVLLSATMP 172
Query: 654 DDVL 665
+VL
Sbjct: 173 SEVL 176
>AC006605-1|AAK85443.1| 430|Caenorhabditis elegans Conserved
germline helicase protein1 protein.
Length = 430
Score = 157 bits (380), Expect = 9e-39
Identities = 72/186 (38%), Positives = 119/186 (63%)
Frame = +3
Query: 105 FDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKTATFSISILQQ 284
F+D L +LL GI+ G+EKPS IQ+ +I + G+D++A+A++GTGKT + I ++++
Sbjct: 45 FEDFCLGRDLLMGIFEKGWEKPSPIQEASIGVALTGQDILARAKNGTGKTGAYCIPVIEK 104
Query: 285 IDTSIRECQALILAPTRELAQQIQKVVIALGDHLNAKCHACIGGTNVREDIRQLESGVHV 464
I +++ QA+++ PTRELA Q ++ + L H+ K GGT++R+DI +L VH+
Sbjct: 105 IQPALKAIQAMVIVPTRELALQTSQICVELSKHIQLKVMVTTGGTDLRDDIMRLNGTVHL 164
Query: 465 VVGTPGRVYDMITRRALHANTIKLFVLDEADEMLSRGFKDQIHDVFKMLSADVQVILLSA 644
V+ TPGR+ D++ + K VLDEAD++LS+ F+ + + L + QV+L SA
Sbjct: 165 VIATPGRILDLMEKGVAKMEHCKTLVLDEADKLLSQDFQGILDRLINFLPKERQVMLYSA 224
Query: 645 TMPDDV 662
T P+ V
Sbjct: 225 TFPNTV 230
>Z54327-7|CAD57690.1| 268|Caenorhabditis elegans Hypothetical
protein C26D10.2b protein.
Length = 268
Score = 124 bits (300), Expect = 4e-29
Identities = 72/189 (38%), Positives = 103/189 (54%), Gaps = 3/189 (1%)
Frame = +3
Query: 105 FDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKTATFSISILQQ 284
F D LK E+LR I GFE PS +Q I I G DV+ QA+SG GKTA F I+ LQQ
Sbjct: 43 FRDFLLKPEILRAIGDCGFEHPSEVQHECIPQAILGMDVVCQAKSGMGKTAVFVITTLQQ 102
Query: 285 IDTSIRECQALILAPTRELAQQIQKVVIALGDHL-NAKCHACIGGTNVREDIRQLESGV- 458
++ E + + TRELA QI K +L K GG +++D +L +
Sbjct: 103 LEPVDGEVSVVCMCHTRELAFQISKEYERFSKYLPGVKVAVFFGGMAIKKDEERLANDCP 162
Query: 459 HVVVGTPGRVYDMITRRALHANTIKLFVLDEADEML-SRGFKDQIHDVFKMLSADVQVIL 635
H+VVGTPGR+ + L + +K FVLDE D+M+ + + ++ KM QV++
Sbjct: 163 HIVVGTPGRMLALARSGKLKLDKVKYFVLDECDKMIGDADMRRDVQEIVKMTPQQKQVMM 222
Query: 636 LSATMPDDV 662
SAT+P ++
Sbjct: 223 FSATLPKEL 231
>Z54327-6|CAA91120.1| 425|Caenorhabditis elegans Hypothetical
protein C26D10.2a protein.
Length = 425
Score = 124 bits (300), Expect = 4e-29
Identities = 72/189 (38%), Positives = 103/189 (54%), Gaps = 3/189 (1%)
Frame = +3
Query: 105 FDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKTATFSISILQQ 284
F D LK E+LR I GFE PS +Q I I G DV+ QA+SG GKTA F I+ LQQ
Sbjct: 43 FRDFLLKPEILRAIGDCGFEHPSEVQHECIPQAILGMDVVCQAKSGMGKTAVFVITTLQQ 102
Query: 285 IDTSIRECQALILAPTRELAQQIQKVVIALGDHL-NAKCHACIGGTNVREDIRQLESGV- 458
++ E + + TRELA QI K +L K GG +++D +L +
Sbjct: 103 LEPVDGEVSVVCMCHTRELAFQISKEYERFSKYLPGVKVAVFFGGMAIKKDEERLANDCP 162
Query: 459 HVVVGTPGRVYDMITRRALHANTIKLFVLDEADEML-SRGFKDQIHDVFKMLSADVQVIL 635
H+VVGTPGR+ + L + +K FVLDE D+M+ + + ++ KM QV++
Sbjct: 163 HIVVGTPGRMLALARSGKLKLDKVKYFVLDECDKMIGDADMRRDVQEIVKMTPQQKQVMM 222
Query: 636 LSATMPDDV 662
SAT+P ++
Sbjct: 223 FSATLPKEL 231
>AC006665-5|AAF39907.1| 630|Caenorhabditis elegans Hypothetical
protein H27M09.1 protein.
Length = 630
Score = 124 bits (299), Expect = 6e-29
Identities = 71/201 (35%), Positives = 111/201 (55%), Gaps = 15/201 (7%)
Frame = +3
Query: 96 VETFDDMNLKEELLRGIYAY-GFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKTATFSIS 272
+ +F +M + LL + G P+AIQ + I + GRD+I A +G+GKT TF +
Sbjct: 188 IGSFLEMKFPKSLLEFMQKQKGIVTPTAIQIQGIPVALSGRDMIGIASTGSGKTMTFVLP 247
Query: 273 IL-----QQIDTSIRECQA---LILAPTRELAQQIQKVVIALGDHLNA------KCHACI 410
++ Q++ + LI+ P+RELA+QI ++I + D L + CI
Sbjct: 248 LVMFCLEQEMKLPFMRSEGPFGLIIVPSRELARQIFDLIIEMFDALGKAGLPEMRAGLCI 307
Query: 411 GGTNVREDIRQLESGVHVVVGTPGRVYDMITRRALHANTIKLFVLDEADEMLSRGFKDQI 590
GG + E + + G+H+VV TPGR+ DM+T++ ++ + VLDEAD ML GF+D+I
Sbjct: 308 GGVPIGEQAKDVRDGIHIVVATPGRLSDMLTKKIINLEVCRYLVLDEADRMLDMGFEDEI 367
Query: 591 HDVFKMLSADVQVILLSATMP 653
+F A Q +L SATMP
Sbjct: 368 KSIFYFFKAQRQTLLFSATMP 388
>AC024876-4|AAU05555.1| 825|Caenorhabditis elegans Hypothetical
protein Y94H6A.5a protein.
Length = 825
Score = 124 bits (298), Expect = 8e-29
Identities = 64/185 (34%), Positives = 104/185 (56%), Gaps = 2/185 (1%)
Frame = +3
Query: 105 FDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQ-GRDVIAQAQSGTGKTATFSISILQ 281
+ + L + + I GF +P+ IQ++ I PCI G+DV+A +++G+GKTA F I +LQ
Sbjct: 26 WQQIGLDHSVYKAIEKKGFNQPTPIQRKTI-PCIMDGKDVVAMSRTGSGKTAAFVIPMLQ 84
Query: 282 QIDT-SIRECQALILAPTRELAQQIQKVVIALGDHLNAKCHACIGGTNVREDIRQLESGV 458
++ +AL+++PTRELA Q KVV LG +C +GG + E +
Sbjct: 85 KLKRRDTTGIRALMVSPTRELALQTFKVVKELGRFTGLRCACLVGGDQIEEQFSTIHENP 144
Query: 459 HVVVGTPGRVYDMITRRALHANTIKLFVLDEADEMLSRGFKDQIHDVFKMLSADVQVILL 638
+++ TPGR+ +I L + ++ V DEAD + GF+DQ+ + K + Q +L
Sbjct: 145 DILLATPGRLLHVIVEMDLRLSYVQYVVFDEADRLFEMGFQDQLTETLKRIPESRQTLLF 204
Query: 639 SATMP 653
SAT+P
Sbjct: 205 SATLP 209
>AC024876-3|AAU05556.1| 871|Caenorhabditis elegans Hypothetical
protein Y94H6A.5b protein.
Length = 871
Score = 124 bits (298), Expect = 8e-29
Identities = 64/185 (34%), Positives = 104/185 (56%), Gaps = 2/185 (1%)
Frame = +3
Query: 105 FDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQ-GRDVIAQAQSGTGKTATFSISILQ 281
+ + L + + I GF +P+ IQ++ I PCI G+DV+A +++G+GKTA F I +LQ
Sbjct: 26 WQQIGLDHSVYKAIEKKGFNQPTPIQRKTI-PCIMDGKDVVAMSRTGSGKTAAFVIPMLQ 84
Query: 282 QIDT-SIRECQALILAPTRELAQQIQKVVIALGDHLNAKCHACIGGTNVREDIRQLESGV 458
++ +AL+++PTRELA Q KVV LG +C +GG + E +
Sbjct: 85 KLKRRDTTGIRALMVSPTRELALQTFKVVKELGRFTGLRCACLVGGDQIEEQFSTIHENP 144
Query: 459 HVVVGTPGRVYDMITRRALHANTIKLFVLDEADEMLSRGFKDQIHDVFKMLSADVQVILL 638
+++ TPGR+ +I L + ++ V DEAD + GF+DQ+ + K + Q +L
Sbjct: 145 DILLATPGRLLHVIVEMDLRLSYVQYVVFDEADRLFEMGFQDQLTETLKRIPESRQTLLF 204
Query: 639 SATMP 653
SAT+P
Sbjct: 205 SATLP 209
>AC006661-5|AAF39890.2| 488|Caenorhabditis elegans Hypothetical
protein H20J04.4a protein.
Length = 488
Score = 122 bits (295), Expect = 2e-28
Identities = 68/196 (34%), Positives = 106/196 (54%), Gaps = 4/196 (2%)
Frame = +3
Query: 87 DQVVETFDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKTATFS 266
+ + F + + + + + + + +Q I ++G D++ A++GTGKT F+
Sbjct: 85 NMTTKKFSQLGVCSWITQQLQTMQIKTATPVQAACIPKILEGSDILGCARTGTGKTLAFA 144
Query: 267 ISILQQIDTSIRECQALILAPTRELAQQIQKVVIALGDHLNAKCHACIGGTNVREDIRQL 446
I ILQ++ ALIL PTRELA QI + ALG + KC +GG ++ R+L
Sbjct: 145 IPILQKLSVDPYGIYALILTPTRELAFQIAEQFTALGKPITLKCSVIVGGRSLIHQAREL 204
Query: 447 ESGVHVVVGTPGRVYDMITRR----ALHANTIKLFVLDEADEMLSRGFKDQIHDVFKMLS 614
HVVV TPGR+ D+I A I+ FVLDEAD ML + DQ+ +F+ +S
Sbjct: 205 SERPHVVVATPGRLADLIESDPDTIAKVFKKIQFFVLDEADRMLEGQYNDQLKPIFESIS 264
Query: 615 ADVQVILLSATMPDDV 662
Q +LLSAT+ +++
Sbjct: 265 EKRQTLLLSATITNNI 280
>AC006661-4|ABB88208.1| 561|Caenorhabditis elegans Hypothetical
protein H20J04.4b protein.
Length = 561
Score = 122 bits (295), Expect = 2e-28
Identities = 68/196 (34%), Positives = 106/196 (54%), Gaps = 4/196 (2%)
Frame = +3
Query: 87 DQVVETFDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKTATFS 266
+ + F + + + + + + + +Q I ++G D++ A++GTGKT F+
Sbjct: 85 NMTTKKFSQLGVCSWITQQLQTMQIKTATPVQAACIPKILEGSDILGCARTGTGKTLAFA 144
Query: 267 ISILQQIDTSIRECQALILAPTRELAQQIQKVVIALGDHLNAKCHACIGGTNVREDIRQL 446
I ILQ++ ALIL PTRELA QI + ALG + KC +GG ++ R+L
Sbjct: 145 IPILQKLSVDPYGIYALILTPTRELAFQIAEQFTALGKPITLKCSVIVGGRSLIHQAREL 204
Query: 447 ESGVHVVVGTPGRVYDMITRR----ALHANTIKLFVLDEADEMLSRGFKDQIHDVFKMLS 614
HVVV TPGR+ D+I A I+ FVLDEAD ML + DQ+ +F+ +S
Sbjct: 205 SERPHVVVATPGRLADLIESDPDTIAKVFKKIQFFVLDEADRMLEGQYNDQLKPIFESIS 264
Query: 615 ADVQVILLSATMPDDV 662
Q +LLSAT+ +++
Sbjct: 265 EKRQTLLLSATITNNI 280
>Z29115-1|CAA82362.1| 489|Caenorhabditis elegans Hypothetical
protein T26G10.1 protein.
Length = 489
Score = 118 bits (283), Expect = 5e-27
Identities = 63/197 (31%), Positives = 106/197 (53%), Gaps = 1/197 (0%)
Frame = +3
Query: 75 DTDWDQVVETFDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKT 254
D + D ++F ++ + + L G+ KPS IQQ A+ +QG+DVI A++G+GKT
Sbjct: 36 DDEEDVKEKSFAELGVSQPLCDACQRLGWMKPSKIQQAALPHALQGKDVIGLAETGSGKT 95
Query: 255 ATFSISILQQIDTSIRECQALILAPTRELAQQIQKVVIALGDHLNAKCHACIGGTNVRED 434
F+I +LQ + + L+L PTRELA QI + ALG + +GG ++
Sbjct: 96 GAFAIPVLQSLLDHPQAFFCLVLTPTRELAFQIGQQFEALGSGIGLIAAVIVGGVDMAAQ 155
Query: 435 IRQLESGVHVVVGTPGRVYDMI-TRRALHANTIKLFVLDEADEMLSRGFKDQIHDVFKML 611
L H++V TPGR+ D + + + +K ++DEAD +L+ F+ ++ + K++
Sbjct: 156 AMALARRPHIIVATPGRLVDHLENTKGFNLKALKFLIMDEADRILNMDFEVELDKILKVI 215
Query: 612 SADVQVILLSATMPDDV 662
+ + L SATM V
Sbjct: 216 PRERRTYLFSATMTKKV 232
>U08102-1|AAB65852.1| 417|Caenorhabditis elegans putative RNA
helicase protein.
Length = 417
Score = 118 bits (283), Expect = 5e-27
Identities = 74/188 (39%), Positives = 103/188 (54%), Gaps = 2/188 (1%)
Frame = +3
Query: 105 FDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKTATFSISILQQ 284
F D LK E+LR I GFE PS +Q I I G DV+ QA+SG GKTA F I+ LQQ
Sbjct: 42 FRDFLLKPEILRAIGDCGFEHPSEVQHECIPQAILGMDVVCQAKSGMGKTAVFVITTLQQ 101
Query: 285 IDTSIRECQALILAPTRELAQQIQKVVIALGDHL-NAKCHACIGGTNVREDIRQLESGV- 458
++ E + + TRELA QI K +L K GG +++D +L +
Sbjct: 102 LEPVDGEVSVVCMCHTRELAFQISKEYERFSKYLPGVKVAVFFGGMAIKKDEERLANDCP 161
Query: 459 HVVVGTPGRVYDMITRRALHANTIKLFVLDEADEMLSRGFKDQIHDVFKMLSADVQVILL 638
H+VVGTPGR+ + L + +K FVLDE D+M+ G D DV ++ QV++
Sbjct: 162 HIVVGTPGRMLALARSGKLKLDKVKYFVLDECDKMI--GDADMRRDVQEI----KQVMMF 215
Query: 639 SATMPDDV 662
SAT+P ++
Sbjct: 216 SATLPKEL 223
>EU051652-1|ABS85191.1| 973|Caenorhabditis elegans MEL-46 protein.
Length = 973
Score = 118 bits (283), Expect = 5e-27
Identities = 61/185 (32%), Positives = 110/185 (59%), Gaps = 1/185 (0%)
Frame = +3
Query: 102 TFDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKTATFSISILQ 281
TF+ + + ++ L + F++PS +Q RAI + GRD++ QA+SGTGKT FS+ ++
Sbjct: 23 TFESLMIGQKTLERLKNSQFDRPSPVQARAIPVGLLGRDMLVQAKSGTGKTLVFSVLAVE 82
Query: 282 QIDTSIRECQALILAPTRELAQQIQKVVIALGDHLNAKCHACIGGTNVREDIRQL-ESGV 458
+D+ Q +I+ PTRE++ QI++ V + A+ +GG+ + ++ L ++
Sbjct: 83 NLDSRSSHIQKVIVTPTREISVQIKETVRKVAP-TGARTSVYVGGSAHKLNLIDLKQTRP 141
Query: 459 HVVVGTPGRVYDMITRRALHANTIKLFVLDEADEMLSRGFKDQIHDVFKMLSADVQVILL 638
+V+GTPGR+ ++ A++ + + FVLDEAD+++ F+D I+ + L QV +
Sbjct: 142 QIVIGTPGRIAQLVKLGAMNMSHVDFFVLDEADKLMDEVFRDDINIIINSLPQIRQVAVF 201
Query: 639 SATMP 653
SAT P
Sbjct: 202 SATYP 206
>CU457744-1|CAM36366.2| 973|Caenorhabditis elegans Hypothetical
protein T06A10.1 protein.
Length = 973
Score = 118 bits (283), Expect = 5e-27
Identities = 61/185 (32%), Positives = 110/185 (59%), Gaps = 1/185 (0%)
Frame = +3
Query: 102 TFDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKTATFSISILQ 281
TF+ + + ++ L + F++PS +Q RAI + GRD++ QA+SGTGKT FS+ ++
Sbjct: 23 TFESLMIGQKTLERLKNSQFDRPSPVQARAIPVGLLGRDMLVQAKSGTGKTLVFSVLAVE 82
Query: 282 QIDTSIRECQALILAPTRELAQQIQKVVIALGDHLNAKCHACIGGTNVREDIRQL-ESGV 458
+D+ Q +I+ PTRE++ QI++ V + A+ +GG+ + ++ L ++
Sbjct: 83 NLDSRSSHIQKVIVTPTREISVQIKETVRKVAP-TGARTSVYVGGSAHKLNLIDLKQTRP 141
Query: 459 HVVVGTPGRVYDMITRRALHANTIKLFVLDEADEMLSRGFKDQIHDVFKMLSADVQVILL 638
+V+GTPGR+ ++ A++ + + FVLDEAD+++ F+D I+ + L QV +
Sbjct: 142 QIVIGTPGRIAQLVKLGAMNMSHVDFFVLDEADKLMDEVFRDDINIIINSLPQIRQVAVF 201
Query: 639 SATMP 653
SAT P
Sbjct: 202 SATYP 206
>Z81555-7|CAB04518.1| 561|Caenorhabditis elegans Hypothetical
protein F58E10.3a protein.
Length = 561
Score = 116 bits (279), Expect = 2e-26
Identities = 67/176 (38%), Positives = 92/176 (52%), Gaps = 6/176 (3%)
Frame = +3
Query: 153 YG-FEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKTATFSISILQQIDTSIRECQA----- 314
YG F+KP+ IQ + + GRD+I+ A++G+GKT F + L I +
Sbjct: 146 YGKFQKPTVIQSISWPIAMSGRDIISIAKTGSGKTLAFMLPALVHITKQAHRQRGEGPAV 205
Query: 315 LILAPTRELAQQIQKVVIALGDHLNAKCHACIGGTNVREDIRQLESGVHVVVGTPGRVYD 494
L+L PTRELAQQ+Q+V I L K GG + R LE GV +VV TPGR+ D
Sbjct: 206 LVLLPTRELAQQVQEVSIDFCHSLGLKMTCLFGGASKGPQARDLERGVDIVVATPGRLLD 265
Query: 495 MITRRALHANTIKLFVLDEADEMLSRGFKDQIHDVFKMLSADVQVILLSATMPDDV 662
+ + VLDEAD ML GF+ QI + + D Q ++ SAT P +V
Sbjct: 266 FLDNGTTNMKKCSYLVLDEADRMLDMGFEPQIKKIIGQIRPDRQTLMFSATWPKEV 321
>AF045641-1|AAK68386.1| 970|Caenorhabditis elegans Hypothetical
protein F53H1.1 protein.
Length = 970
Score = 113 bits (273), Expect = 8e-26
Identities = 67/199 (33%), Positives = 104/199 (52%), Gaps = 8/199 (4%)
Frame = +3
Query: 81 DWDQVVETFDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKTAT 260
D + ++T+ + +++ + + + KP++IQ +AI + GRDVI A++G+GKT
Sbjct: 298 DCPKPIKTWAQCGVNLKMMNVLKKFEYSKPTSIQAQAIPSIMSGRDVIGIAKTGSGKTLA 357
Query: 261 FSISILQQI--DTSIRECQ---ALILAPTRELAQQIQKVVIALGDHLNAKCHACIGGTNV 425
F + + + I + E A+ILAPTRELA Q K L K GG +
Sbjct: 358 FLLPMFRHILDQPELEEGDGPIAVILAPTRELAMQTYKEANKFAKPLGLKVACTYGGVGI 417
Query: 426 REDIRQLESGVHVVVGTPGRVYDMI---TRRALHANTIKLFVLDEADEMLSRGFKDQIHD 596
E I L+ G +VV TPGR+ D++ + + + + VLDEAD M +GF+ QI
Sbjct: 418 SEQIADLKRGAEIVVCTPGRMIDVLAANSGKVTNLRRVTYLVLDEADRMFDKGFEPQIMK 477
Query: 597 VFKMLSADVQVILLSATMP 653
V + D Q +L SAT P
Sbjct: 478 VVNNIRPDKQTVLFSATFP 496
>U13070-1|AAK67224.1| 730|Caenorhabditis elegans Hypothetical
protein F01F1.7 protein.
Length = 730
Score = 111 bits (266), Expect = 6e-25
Identities = 64/182 (35%), Positives = 103/182 (56%), Gaps = 10/182 (5%)
Frame = +3
Query: 96 VETFDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKTATFSISI 275
+ +++ +E+ + + G+ +P+ IQ++AI +Q RDVI A++G+GKTA F + +
Sbjct: 300 LRNWEEAGFPDEVYQAVKEIGYLEPTPIQRQAIPIGLQNRDVIGVAETGSGKTAAFLLPL 359
Query: 276 LQQIDTSIRECQ----------ALILAPTRELAQQIQKVVIALGDHLNAKCHACIGGTNV 425
L I TS+ + + A+I+APTRELAQQI++ G L K + IGG +
Sbjct: 360 LVWI-TSLPKMERQEHRDLGPYAIIMAPTRELAQQIEEETNKFGKLLGIKTVSVIGGASR 418
Query: 426 REDIRQLESGVHVVVGTPGRVYDMITRRALHANTIKLFVLDEADEMLSRGFKDQIHDVFK 605
+ +L GV VV+ TPGR+ D++ R L N +LDEAD ML GF+ + V +
Sbjct: 419 EDQGMKLRMGVEVVIATPGRLLDVLENRYLLLNQCTYVILDEADRMLDMGFEPDVQKVLE 478
Query: 606 ML 611
+
Sbjct: 479 YM 480
>AC024753-1|AAF60456.1| 732|Caenorhabditis elegans Hypothetical
protein Y23H5B.6 protein.
Length = 732
Score = 111 bits (266), Expect = 6e-25
Identities = 65/191 (34%), Positives = 106/191 (55%), Gaps = 5/191 (2%)
Frame = +3
Query: 105 FDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKTATFSISILQQ 284
F+D L L G+ + KP+ IQ+ I + G DV+ A++G+GKT I +L+
Sbjct: 78 FEDFPLSWRTLEGLKDNDYTKPTEIQRDTIAYSLTGSDVVGAAKTGSGKTLALVIPVLEA 137
Query: 285 IDTSIRECQ----ALILAPTRELAQQIQKVVIALGDHLNAKCHACIGGTNVREDIRQLES 452
+ + ALI++PTRELA Q + A+G H C IGG++V + ++ S
Sbjct: 138 LWRAKWSPDYGLGALIISPTRELALQTFSTINAVGAHHGFSCGLVIGGSDVAFERNRI-S 196
Query: 453 GVHVVVGTPGRVYDMITRRA-LHANTIKLFVLDEADEMLSRGFKDQIHDVFKMLSADVQV 629
G++++V TPGR+ + A + +++++ VLDEAD ML GF Q++ + L A+ Q
Sbjct: 197 GINIIVCTPGRLLQHMDENAQMSCDSLQVLVLDEADRMLDMGFSKQLNSIINNLPAERQT 256
Query: 630 ILLSATMPDDV 662
+L SAT +V
Sbjct: 257 LLFSATQTRNV 267
>Z50071-3|CAA90407.1| 613|Caenorhabditis elegans Hypothetical
protein T07D4.4c protein.
Length = 613
Score = 110 bits (265), Expect = 7e-25
Identities = 72/198 (36%), Positives = 116/198 (58%), Gaps = 8/198 (4%)
Frame = +3
Query: 96 VETFDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQG--RDVIAQAQSGTGKTATFSI 269
+ +F ++ LK E+L+ + F+ P+ IQ+ A+ + ++IAQAQSGTGKTA F +
Sbjct: 208 ISSFRELRLKPEVLKALDTMNFQFPTRIQETALPLLLMEPPSNLIAQAQSGTGKTAAFVL 267
Query: 270 SILQQIDTSIRECQALILAPTRELAQQIQKVVIALGDHL-NAKCHACIGGTNVREDIRQL 446
++L +ID ++ Q + LAPT ELA+QI +VV +G + N K H I G N+ +R
Sbjct: 268 TMLCRIDVNLMCPQCICLAPTLELAKQIGEVVEKMGKFIDNLKIHYAIKGGNMAA-MRGR 326
Query: 447 ESGVHVVVGTPGRVYDMITR-RALHANTIKLFVLDEADEML-SRGFKDQIHDVFKML--- 611
+ +V+GTPG D + + + + + I+ VLDEAD M+ +GF D ++ M+
Sbjct: 327 KLTEQIVIGTPGITRDYLQKYKCIDPSKIRCLVLDEADVMIYHQGFTDISTTIYNMVEDA 386
Query: 612 SADVQVILLSATMPDDVL 665
S VQ +L SAT + V+
Sbjct: 387 SDSVQSMLFSATYDEPVI 404
>Z50071-2|CAA90406.1| 638|Caenorhabditis elegans Hypothetical
protein T07D4.4b protein.
Length = 638
Score = 110 bits (265), Expect = 7e-25
Identities = 72/198 (36%), Positives = 116/198 (58%), Gaps = 8/198 (4%)
Frame = +3
Query: 96 VETFDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQG--RDVIAQAQSGTGKTATFSI 269
+ +F ++ LK E+L+ + F+ P+ IQ+ A+ + ++IAQAQSGTGKTA F +
Sbjct: 233 ISSFRELRLKPEVLKALDTMNFQFPTRIQETALPLLLMEPPSNLIAQAQSGTGKTAAFVL 292
Query: 270 SILQQIDTSIRECQALILAPTRELAQQIQKVVIALGDHL-NAKCHACIGGTNVREDIRQL 446
++L +ID ++ Q + LAPT ELA+QI +VV +G + N K H I G N+ +R
Sbjct: 293 TMLCRIDVNLMCPQCICLAPTLELAKQIGEVVEKMGKFIDNLKIHYAIKGGNMAA-MRGR 351
Query: 447 ESGVHVVVGTPGRVYDMITR-RALHANTIKLFVLDEADEML-SRGFKDQIHDVFKML--- 611
+ +V+GTPG D + + + + + I+ VLDEAD M+ +GF D ++ M+
Sbjct: 352 KLTEQIVIGTPGITRDYLQKYKCIDPSKIRCLVLDEADVMIYHQGFTDISTTIYNMVEDA 411
Query: 612 SADVQVILLSATMPDDVL 665
S VQ +L SAT + V+
Sbjct: 412 SDSVQSMLFSATYDEPVI 429
>Z50071-1|CAA90408.1| 1022|Caenorhabditis elegans Hypothetical protein
T07D4.4a protein.
Length = 1022
Score = 110 bits (265), Expect = 7e-25
Identities = 72/198 (36%), Positives = 116/198 (58%), Gaps = 8/198 (4%)
Frame = +3
Query: 96 VETFDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQG--RDVIAQAQSGTGKTATFSI 269
+ +F ++ LK E+L+ + F+ P+ IQ+ A+ + ++IAQAQSGTGKTA F +
Sbjct: 617 ISSFRELRLKPEVLKALDTMNFQFPTRIQETALPLLLMEPPSNLIAQAQSGTGKTAAFVL 676
Query: 270 SILQQIDTSIRECQALILAPTRELAQQIQKVVIALGDHL-NAKCHACIGGTNVREDIRQL 446
++L +ID ++ Q + LAPT ELA+QI +VV +G + N K H I G N+ +R
Sbjct: 677 TMLCRIDVNLMCPQCICLAPTLELAKQIGEVVEKMGKFIDNLKIHYAIKGGNMAA-MRGR 735
Query: 447 ESGVHVVVGTPGRVYDMITR-RALHANTIKLFVLDEADEML-SRGFKDQIHDVFKML--- 611
+ +V+GTPG D + + + + + I+ VLDEAD M+ +GF D ++ M+
Sbjct: 736 KLTEQIVIGTPGITRDYLQKYKCIDPSKIRCLVLDEADVMIYHQGFTDISTTIYNMVEDA 795
Query: 612 SADVQVILLSATMPDDVL 665
S VQ +L SAT + V+
Sbjct: 796 SDSVQSMLFSATYDEPVI 813
>AC025726-23|AAK73934.1| 763|Caenorhabditis elegans Hypothetical
protein Y71G12B.8 protein.
Length = 763
Score = 109 bits (263), Expect = 1e-24
Identities = 73/230 (31%), Positives = 119/230 (51%), Gaps = 28/230 (12%)
Frame = +3
Query: 57 MDPGTLDTDWDQVVETFDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQ 236
+D +LDT V +F+ MNL ++L+ G+ P+ IQQ I + G+D+ A A
Sbjct: 137 IDGKSLDTS---VNVSFEQMNLSRQILKACSGAGYSDPTPIQQACIPVALTGKDICACAA 193
Query: 237 SGTGKTATFSISILQQIDTSIR--EC-QALILAPTRELAQQIQKVVIALGDHLNAKCHAC 407
+GTGKTA F + IL+++ + C + L+L PTRELA Q+ +V L + + C
Sbjct: 194 TGTGKTAAFVLPILERMIYRPKGASCTRVLVLVPTRELAIQVFQVFRKLSTFIQLEVCLC 253
Query: 408 IGGTNVREDIRQLESGVHVVVGTPGRVYDMI-------------------------TRRA 512
GG +++ L SG VVV TPGR+ D + +R+
Sbjct: 254 AGGLDLKAQEAALRSGPDVVVATPGRLIDHLHNSPSFNLSNIEVFFKTPNIPPKKNSRKI 313
Query: 513 LHANTIKLFVLDEADEMLSRGFKDQIHDVFKMLSADVQVILLSATMPDDV 662
++ VLDEAD ML F+DQ++++ ++ + + Q +L SATM +++
Sbjct: 314 CKIPNFQVLVLDEADRMLEEAFRDQMNELIRLCAQNRQTLLFSATMTEEI 363
>AF025451-3|AAB71200.2| 634|Caenorhabditis elegans Hypothetical
protein C24H12.4a protein.
Length = 634
Score = 108 bits (259), Expect = 4e-24
Identities = 64/207 (30%), Positives = 113/207 (54%), Gaps = 7/207 (3%)
Frame = +3
Query: 63 PGTLDTDWDQVVETFDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQSG 242
P + D++ +TF D L E +L+ I G+EK + +Q+ I ++ ++++ +A++G
Sbjct: 77 PQVDEMDFEPEHKTFADFGLDERILKSIGELGWEKANQVQESVISLALENKNIMGRARTG 136
Query: 243 TGKTATFSISILQQI-------DTSIRECQALILAPTRELAQQIQKVVIALGDHLNAKCH 401
+GKT F I ++Q++ D S+ A+I+APT+EL QI K+ + L L
Sbjct: 137 SGKTGAFLIPLVQKLIAESKTNDGSVGP-SAVIIAPTKELITQIYKLFVKLSQALPFLQA 195
Query: 402 ACIGGTNVREDIRQLESGVHVVVGTPGRVYDMITRRALHANTIKLFVLDEADEMLSRGFK 581
+ N E+ LE HVVV TPG++ M + R + + V+DEAD +LS G++
Sbjct: 196 INLCDINEEENSVWLEDRSHVVVTTPGKLLRMCSLRPEYCTLVSYLVMDEADLLLSFGYE 255
Query: 582 DQIHDVFKMLSADVQVILLSATMPDDV 662
+++ + L Q ++ SAT+ DD+
Sbjct: 256 EEMIKIRSKLPPTYQCLMTSATLKDDM 282
>AC024810-3|AAU20831.1| 660|Caenorhabditis elegans Vasa- and
belle-like helicase protein1, isoform c protein.
Length = 660
Score = 100 bits (239), Expect = 1e-21
Identities = 60/184 (32%), Positives = 97/184 (52%), Gaps = 16/184 (8%)
Frame = +3
Query: 96 VETFDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKTATFSISI 275
+E F++ ++ + G+ KP+ +Q+ +I + RD+++ AQ+G+GKTA F + I
Sbjct: 138 IEHFNEAGFGPAVMENVNRSGYSKPTPVQKHSIPTLLANRDLMSCAQTGSGKTAAFLLPI 197
Query: 276 LQQI------------DTSIRECQ---ALILAPTRELAQQIQKVVIALGDHLNAKCHACI 410
+Q I T+ R AL+L+PTRELA QI K N +
Sbjct: 198 IQHILAGGPDMVKPPAFTNGRRTYYPCALVLSPTRELAIQIHKEATKFSYKSNIQTAILY 257
Query: 411 GGT-NVREDIRQLESGVHVVVGTPGRVYDMITRRALHANTIKLFVLDEADEMLSRGFKDQ 587
GG N R+ + +L +G H+++ TPGR+ D+I + + + VLDEAD ML GF+ Q
Sbjct: 258 GGRENYRDQVNRLRAGTHILIATPGRLIDIIEQGFIGLAGCRYLVLDEADRMLDMGFEPQ 317
Query: 588 IHDV 599
I +
Sbjct: 318 IRKI 321
>AC024810-2|AAK68520.1| 644|Caenorhabditis elegans Vasa- and
belle-like helicase protein1, isoform b protein.
Length = 644
Score = 100 bits (239), Expect = 1e-21
Identities = 60/184 (32%), Positives = 97/184 (52%), Gaps = 16/184 (8%)
Frame = +3
Query: 96 VETFDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKTATFSISI 275
+E F++ ++ + G+ KP+ +Q+ +I + RD+++ AQ+G+GKTA F + I
Sbjct: 122 IEHFNEAGFGPAVMENVNRSGYSKPTPVQKHSIPTLLANRDLMSCAQTGSGKTAAFLLPI 181
Query: 276 LQQI------------DTSIRECQ---ALILAPTRELAQQIQKVVIALGDHLNAKCHACI 410
+Q I T+ R AL+L+PTRELA QI K N +
Sbjct: 182 IQHILAGGPDMVKPPAFTNGRRTYYPCALVLSPTRELAIQIHKEATKFSYKSNIQTAILY 241
Query: 411 GGT-NVREDIRQLESGVHVVVGTPGRVYDMITRRALHANTIKLFVLDEADEMLSRGFKDQ 587
GG N R+ + +L +G H+++ TPGR+ D+I + + + VLDEAD ML GF+ Q
Sbjct: 242 GGRENYRDQVNRLRAGTHILIATPGRLIDIIEQGFIGLAGCRYLVLDEADRMLDMGFEPQ 301
Query: 588 IHDV 599
I +
Sbjct: 302 IRKI 305
>AC024810-1|AAF60764.1| 641|Caenorhabditis elegans Vasa- and
belle-like helicase protein1, isoform a protein.
Length = 641
Score = 100 bits (239), Expect = 1e-21
Identities = 60/184 (32%), Positives = 97/184 (52%), Gaps = 16/184 (8%)
Frame = +3
Query: 96 VETFDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKTATFSISI 275
+E F++ ++ + G+ KP+ +Q+ +I + RD+++ AQ+G+GKTA F + I
Sbjct: 119 IEHFNEAGFGPAVMENVNRSGYSKPTPVQKHSIPTLLANRDLMSCAQTGSGKTAAFLLPI 178
Query: 276 LQQI------------DTSIRECQ---ALILAPTRELAQQIQKVVIALGDHLNAKCHACI 410
+Q I T+ R AL+L+PTRELA QI K N +
Sbjct: 179 IQHILAGGPDMVKPPAFTNGRRTYYPCALVLSPTRELAIQIHKEATKFSYKSNIQTAILY 238
Query: 411 GGT-NVREDIRQLESGVHVVVGTPGRVYDMITRRALHANTIKLFVLDEADEMLSRGFKDQ 587
GG N R+ + +L +G H+++ TPGR+ D+I + + + VLDEAD ML GF+ Q
Sbjct: 239 GGRENYRDQVNRLRAGTHILIATPGRLIDIIEQGFIGLAGCRYLVLDEADRMLDMGFEPQ 298
Query: 588 IHDV 599
I +
Sbjct: 299 IRKI 302
>AL034488-3|CAA22456.1| 504|Caenorhabditis elegans Hypothetical
protein Y54G11A.3 protein.
Length = 504
Score = 99.1 bits (236), Expect = 2e-21
Identities = 64/181 (35%), Positives = 91/181 (50%), Gaps = 12/181 (6%)
Frame = +3
Query: 156 GFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKTATFSISILQQIDTSIRECQ-------- 311
GFEKPS IQ + + G+D I +Q+G+GKT F + L ID + + +
Sbjct: 103 GFEKPSPIQSQMWPLLLSGQDCIGVSQTGSGKTLAFLLPALLHIDAQLAQYEKNDEEQKP 162
Query: 312 ---ALILAPTRELAQQIQKVVIALGDHLNAKCHACI-GGTNVREDIRQLESGVHVVVGTP 479
L+L+PTRELAQQI+ V N C+ GG + E + GV +V+ TP
Sbjct: 163 SPFVLVLSPTRELAQQIEGEVKKYS--YNGYKSVCLYGGGSRPEQVEACRGGVEIVIATP 220
Query: 480 GRVYDMITRRALHANTIKLFVLDEADEMLSRGFKDQIHDVFKMLSADVQVILLSATMPDD 659
GR+ D+ + ++ VLDEAD ML GF+ I + + D V L SAT P+
Sbjct: 221 GRLTDLSNDGVISLASVTYVVLDEADRMLDMGFEVAIRRILFEIRPDRLVALTSATWPEG 280
Query: 660 V 662
V
Sbjct: 281 V 281
>AF067608-1|AAC17654.2| 544|Caenorhabditis elegans Hypothetical
protein B0511.6 protein.
Length = 544
Score = 96.3 bits (229), Expect = 2e-20
Identities = 60/178 (33%), Positives = 100/178 (56%), Gaps = 6/178 (3%)
Frame = +3
Query: 132 LLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKTATF---SISILQQIDTSIR 302
LL+ + GF + IQ ++I P ++G+DV+A A++G+GKT F +I +L +++
Sbjct: 79 LLKAVQGLGFTTMTEIQAKSIDPLLEGKDVLASAKTGSGKTLAFLLPAIELLHKLNWKQH 138
Query: 303 E-CQALILAPTRELAQQIQKVVIALGDHLNAKCHACIGGTNVREDIRQLESGVHVVVGTP 479
+I++PTREL+ Q V+ L + N +GG+N + +L GV ++V TP
Sbjct: 139 NGTGVIIVSPTRELSMQTYGVLSELLEGSNLTYGLVMGGSNRSAEKDKLAKGVSILVATP 198
Query: 480 GRVYDMI--TRRALHANTIKLFVLDEADEMLSRGFKDQIHDVFKMLSADVQVILLSAT 647
GR+ D + T L N +K ++DEAD +L GF+ ++ V + L Q +L SAT
Sbjct: 199 GRLLDHLQNTDNFLVRN-MKCLIIDEADRILDIGFEIEMQQVLRHLPKQRQSMLFSAT 255
>AC024859-14|AAY43989.1| 643|Caenorhabditis elegans Hypothetical
protein Y71H2AM.19 protein.
Length = 643
Score = 96.3 bits (229), Expect = 2e-20
Identities = 70/216 (32%), Positives = 116/216 (53%), Gaps = 22/216 (10%)
Frame = +3
Query: 81 DWDQVVETFDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQG-RDVIAQAQSGTGKTA 257
D Q + F D++L E + I G+++P+ +Q+ +I P +QG RD+++ AQ+G+GKTA
Sbjct: 160 DVPQPISLFSDLSLHEWIEENIKTAGYDRPTPVQKYSI-PALQGGRDLMSCAQTGSGKTA 218
Query: 258 TFSI----SILQQ----IDTSI-----RECQ---ALILAPTRELAQQIQKVVIALGDHLN 389
F + +ILQ + S+ R+ Q AL+L+PTREL+ QI
Sbjct: 219 AFLVPLVNAILQDGPDAVHRSVTSSGGRKKQYPSALVLSPTRELSLQIFNESRKFAYRTP 278
Query: 390 AKCHACIGGT-NVREDIRQLESGVHVVVGTPGRVYDMITRRALHANTIKLFVLDEADEML 566
GG N ++ I +L G H+++ TPGR+ D++ + + + VLDEAD ML
Sbjct: 279 ITSALLYGGRENYKDQIHKLRLGCHILIATPGRLIDVMDQGLIGMEGCRYLVLDEADRML 338
Query: 567 SRGFKDQIHDVF---KMLSADVQV-ILLSATMPDDV 662
GF+ QI + +M S + ++ + SAT P ++
Sbjct: 339 DMGFEPQIRQIVECNRMPSKEERITAMFSATFPKEI 374
>U62772-1|AAB04136.1| 763|Caenorhabditis elegans RNA helicase
protein.
Length = 763
Score = 95.5 bits (227), Expect = 3e-20
Identities = 65/202 (32%), Positives = 100/202 (49%), Gaps = 14/202 (6%)
Frame = +3
Query: 99 ETFDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKTATFSISIL 278
+TF + NL E + + + G+ K + IQQ A+ QG D++A AQ+G+GKTA F + I+
Sbjct: 341 KTFAEANLTETMQKNVAHAGYSKTTPIQQYALPLVHQGYDIMACAQTGSGKTAAFLLPIM 400
Query: 279 QQI--DTSIREC-------QALILAPTRELAQQIQKVVIALGDHLNAKCHACIGGTNVRE 431
++ D ++ + +IL PTRELA QI + GG V
Sbjct: 401 TRLIDDNNLNTAGEGGCYPRCIILTPTRELADQIYNEGRKFAYQTMMEIKPVYGGLAVGY 460
Query: 432 DIRQLESGVHVVVGTPGRVYDMITRRALHANTIKLFVLDEADEML-SRGFKDQIHDVFKM 608
+ Q+E G ++VGT GR+ + + + FVLDEAD M+ + GF I +
Sbjct: 461 NKGQIEKGATIIVGTVGRIKHFCEEGTIKLDKCRFFVLDEADRMIDAMGFGTDIETIVNY 520
Query: 609 LS----ADVQVILLSATMPDDV 662
S + Q ++ SAT PD V
Sbjct: 521 DSMPRKENRQTLMFSATFPDSV 542
>L19948-1|AAC27384.1| 763|Caenorhabditis elegans RNA helicase
protein.
Length = 763
Score = 95.5 bits (227), Expect = 3e-20
Identities = 65/202 (32%), Positives = 100/202 (49%), Gaps = 14/202 (6%)
Frame = +3
Query: 99 ETFDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKTATFSISIL 278
+TF + NL E + + + G+ K + IQQ A+ QG D++A AQ+G+GKTA F + I+
Sbjct: 341 KTFAEANLTETMQKNVAHAGYSKTTPIQQYALPLVHQGYDIMACAQTGSGKTAAFLLPIM 400
Query: 279 QQI--DTSIREC-------QALILAPTRELAQQIQKVVIALGDHLNAKCHACIGGTNVRE 431
++ D ++ + +IL PTRELA QI + GG V
Sbjct: 401 TRLIDDNNLNTAGEGGCYPRCIILTPTRELADQIYNEGRKFAYQTMMEIKPVYGGLAVGY 460
Query: 432 DIRQLESGVHVVVGTPGRVYDMITRRALHANTIKLFVLDEADEML-SRGFKDQIHDVFKM 608
+ Q+E G ++VGT GR+ + + + FVLDEAD M+ + GF I +
Sbjct: 461 NKGQIEKGATIIVGTVGRIKHFCEEGTIKLDKCRFFVLDEADRMIDAMGFGTDIETIVNY 520
Query: 609 LS----ADVQVILLSATMPDDV 662
S + Q ++ SAT PD V
Sbjct: 521 DSMPRKENRQTLMFSATFPDSV 542
>AF000197-1|AAB52901.2| 763|Caenorhabditis elegans Germ-line
helicase protein 1 protein.
Length = 763
Score = 95.5 bits (227), Expect = 3e-20
Identities = 65/202 (32%), Positives = 100/202 (49%), Gaps = 14/202 (6%)
Frame = +3
Query: 99 ETFDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKTATFSISIL 278
+TF + NL E + + + G+ K + IQQ A+ QG D++A AQ+G+GKTA F + I+
Sbjct: 341 KTFAEANLTETMQKNVAHAGYSKTTPIQQYALPLVHQGYDIMACAQTGSGKTAAFLLPIM 400
Query: 279 QQI--DTSIREC-------QALILAPTRELAQQIQKVVIALGDHLNAKCHACIGGTNVRE 431
++ D ++ + +IL PTRELA QI + GG V
Sbjct: 401 TRLIDDNNLNTAGEGGCYPRCIILTPTRELADQIYNEGRKFAYQTMMEIKPVYGGLAVGY 460
Query: 432 DIRQLESGVHVVVGTPGRVYDMITRRALHANTIKLFVLDEADEML-SRGFKDQIHDVFKM 608
+ Q+E G ++VGT GR+ + + + FVLDEAD M+ + GF I +
Sbjct: 461 NKGQIEKGATIIVGTVGRIKHFCEEGTIKLDKCRFFVLDEADRMIDAMGFGTDIETIVNY 520
Query: 609 LS----ADVQVILLSATMPDDV 662
S + Q ++ SAT PD V
Sbjct: 521 DSMPRKENRQTLMFSATFPDSV 542
>Z81449-4|CAB03765.1| 811|Caenorhabditis elegans Hypothetical
protein C46F11.4 protein.
Length = 811
Score = 91.9 bits (218), Expect = 4e-19
Identities = 61/193 (31%), Positives = 95/193 (49%), Gaps = 6/193 (3%)
Frame = +3
Query: 102 TFDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKTATFS----I 269
+F + + L+ I +E+P+ IQ AI + GRDV+ A++G+GKTA + +
Sbjct: 266 SFAHFSFDKLLMEAIRKSEYEQPTPIQAMAIPSALSGRDVLGIAKTGSGKTAAYLWPAIV 325
Query: 270 SILQQIDTSIRECQ-ALILAPTRELAQQIQKVVIALGDHLNAKCHACIGGTNVREDIRQL 446
I+ Q D E A+I+ PTRELA Q+ + N GG + E +L
Sbjct: 326 HIMDQPDLKAGEGPVAVIVVPTRELAIQVFQEAKKFCKVYNINPICAYGGGSKWEQSNEL 385
Query: 447 ES-GVHVVVGTPGRVYDMITRRALHANTIKLFVLDEADEMLSRGFKDQIHDVFKMLSADV 623
++ G +VV TPGR+ D++ A + V DEAD M GF+ Q+ + + D
Sbjct: 386 QNEGAEMVVCTPGRIIDLVKMGATNFLRTTFLVFDEADRMFDMGFEAQVKSISDHVRPDR 445
Query: 624 QVILLSATMPDDV 662
Q ++ SAT V
Sbjct: 446 QCLMFSATFKQKV 458
>U60449-1|AAB03510.1| 974|Caenorhabditis elegans GLH-2 protein.
Length = 974
Score = 91.5 bits (217), Expect = 5e-19
Identities = 62/202 (30%), Positives = 97/202 (48%), Gaps = 14/202 (6%)
Frame = +3
Query: 99 ETFDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKTATFSISIL 278
+TF + NL E + + + G+ K + IQQ + QG D++A AQ+G+GKTA F + I+
Sbjct: 552 KTFSEANLGETMKKNVAHAGYTKTTPIQQYTLPLIHQGHDIMACAQTGSGKTAAFLLPIM 611
Query: 279 QQI--DTSIREC-------QALILAPTRELAQQIQKVVIALGDHLNAKCHACIGGTNVRE 431
++ + + + +IL PTREL QI + GG V
Sbjct: 612 ARLIDENDLNTAGEGGCYPRCIILTPTRELTDQIYNEGRKFAYQTMMEIRPVYGGLAVGY 671
Query: 432 DIRQLESGVHVVVGTPGRVYDMITRRALHANTIKLFVLDEADEML-SRGFKDQIHDVFKM 608
+ Q+E G ++VGT GR+ + + + FVLDEAD M+ + GF I +
Sbjct: 672 NKGQIEKGATIIVGTVGRIKHFCEEGTIKLDKCRFFVLDEADRMIDAMGFGTDIDTIVNY 731
Query: 609 LS----ADVQVILLSATMPDDV 662
S + Q ++ SAT PD V
Sbjct: 732 ESMPKKENRQTLMFSATFPDSV 753
>U60194-1|AAB03337.1| 974|Caenorhabditis elegans RNA helicase GLH-2
protein.
Length = 974
Score = 91.5 bits (217), Expect = 5e-19
Identities = 62/202 (30%), Positives = 97/202 (48%), Gaps = 14/202 (6%)
Frame = +3
Query: 99 ETFDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKTATFSISIL 278
+TF + NL E + + + G+ K + IQQ + QG D++A AQ+G+GKTA F + I+
Sbjct: 552 KTFSEANLGETMKKNVAHAGYTKTTPIQQYTLPLIHQGHDIMACAQTGSGKTAAFLLPIM 611
Query: 279 QQI--DTSIREC-------QALILAPTRELAQQIQKVVIALGDHLNAKCHACIGGTNVRE 431
++ + + + +IL PTREL QI + GG V
Sbjct: 612 ARLIDENDLNTAGEGGCYPRCIILTPTRELTDQIYNEGRKFAYQTMMEIRPVYGGLAVGY 671
Query: 432 DIRQLESGVHVVVGTPGRVYDMITRRALHANTIKLFVLDEADEML-SRGFKDQIHDVFKM 608
+ Q+E G ++VGT GR+ + + + FVLDEAD M+ + GF I +
Sbjct: 672 NKGQIEKGATIIVGTVGRIKHFCEEGTIKLDKCRFFVLDEADRMIDAMGFGTDIDTIVNY 731
Query: 609 LS----ADVQVILLSATMPDDV 662
S + Q ++ SAT PD V
Sbjct: 732 ESMPKKENRQTLMFSATFPDSV 753
>AC006625-11|AAK68269.1| 974|Caenorhabditis elegans Germ-line
helicase protein 2 protein.
Length = 974
Score = 91.5 bits (217), Expect = 5e-19
Identities = 62/202 (30%), Positives = 97/202 (48%), Gaps = 14/202 (6%)
Frame = +3
Query: 99 ETFDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKTATFSISIL 278
+TF + NL E + + + G+ K + IQQ + QG D++A AQ+G+GKTA F + I+
Sbjct: 552 KTFSEANLGETMKKNVAHAGYTKTTPIQQYTLPLIHQGHDIMACAQTGSGKTAAFLLPIM 611
Query: 279 QQI--DTSIREC-------QALILAPTRELAQQIQKVVIALGDHLNAKCHACIGGTNVRE 431
++ + + + +IL PTREL QI + GG V
Sbjct: 612 ARLIDENDLNTAGEGGCYPRCIILTPTRELTDQIYNEGRKFAYQTMMEIRPVYGGLAVGY 671
Query: 432 DIRQLESGVHVVVGTPGRVYDMITRRALHANTIKLFVLDEADEML-SRGFKDQIHDVFKM 608
+ Q+E G ++VGT GR+ + + + FVLDEAD M+ + GF I +
Sbjct: 672 NKGQIEKGATIIVGTVGRIKHFCEEGTIKLDKCRFFVLDEADRMIDAMGFGTDIDTIVNY 731
Query: 609 LS----ADVQVILLSATMPDDV 662
S + Q ++ SAT PD V
Sbjct: 732 ESMPKKENRQTLMFSATFPDSV 753
>AF079509-1|AAC28388.1| 720|Caenorhabditis elegans germline RNA
helicase-3 protein.
Length = 720
Score = 87.8 bits (208), Expect = 6e-18
Identities = 63/205 (30%), Positives = 102/205 (49%), Gaps = 14/205 (6%)
Frame = +3
Query: 90 QVVETFDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKTATFSI 269
Q ++F D ++ + + R + G+ + + IQQ + G+D++A AQ+G+GKTA F +
Sbjct: 295 QPCKSFSDSDIPQSMRRNVERAGYTRTTPIQQYTLPLVADGKDILACAQTGSGKTAAFLL 354
Query: 270 SILQQI----DTSIRE---C--QALILAPTRELAQQIQKVVIALGDHLNAKCHACIGGTN 422
I+ ++ D + C + +IL PTRELA QI + GG N
Sbjct: 355 PIMSRLILEKDLNYGAEGGCYPRCIILTPTRELADQIYNEGRKFSYQSVMEIKPVYGGIN 414
Query: 423 VREDIRQLESGVHVVVGTPGRVYDMITRRALHANTIKLFVLDEADEML-SRGFKDQIHDV 599
V + Q+ G ++VGT GRV A+ + + VLDEAD M+ S GF +I +
Sbjct: 415 VGYNKSQIMKGCTIIVGTIGRVKHFCEDGAIKLDKCRYLVLDEADRMIDSMGFGPEIEQI 474
Query: 600 --FKMLSAD--VQVILLSATMPDDV 662
+K + + Q ++ SAT P V
Sbjct: 475 INYKNMPKNDKRQTMMFSATFPSSV 499
>AF003145-4|AAB57719.1| 720|Caenorhabditis elegans Germ-line
helicase protein 3 protein.
Length = 720
Score = 87.8 bits (208), Expect = 6e-18
Identities = 63/205 (30%), Positives = 102/205 (49%), Gaps = 14/205 (6%)
Frame = +3
Query: 90 QVVETFDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKTATFSI 269
Q ++F D ++ + + R + G+ + + IQQ + G+D++A AQ+G+GKTA F +
Sbjct: 295 QPCKSFSDSDIPQSMRRNVERAGYTRTTPIQQYTLPLVADGKDILACAQTGSGKTAAFLL 354
Query: 270 SILQQI----DTSIRE---C--QALILAPTRELAQQIQKVVIALGDHLNAKCHACIGGTN 422
I+ ++ D + C + +IL PTRELA QI + GG N
Sbjct: 355 PIMSRLILEKDLNYGAEGGCYPRCIILTPTRELADQIYNEGRKFSYQSVMEIKPVYGGIN 414
Query: 423 VREDIRQLESGVHVVVGTPGRVYDMITRRALHANTIKLFVLDEADEML-SRGFKDQIHDV 599
V + Q+ G ++VGT GRV A+ + + VLDEAD M+ S GF +I +
Sbjct: 415 VGYNKSQIMKGCTIIVGTIGRVKHFCEDGAIKLDKCRYLVLDEADRMIDSMGFGPEIEQI 474
Query: 600 --FKMLSAD--VQVILLSATMPDDV 662
+K + + Q ++ SAT P V
Sbjct: 475 INYKNMPKNDKRQTMMFSATFPSSV 499
>Z22177-1|CAA80151.1| 578|Caenorhabditis elegans Hypothetical
protein ZK512.2 protein.
Length = 578
Score = 79.4 bits (187), Expect = 2e-15
Identities = 47/152 (30%), Positives = 82/152 (53%), Gaps = 8/152 (5%)
Frame = +3
Query: 216 DVIAQAQSGTGKTATFSISILQQIDTSI---RECQALILAPTRELAQQIQKVVIALGDHL 386
DV+ ++ +G+GKT F + +++ I + + ALIL+P+REL QI V+ + L
Sbjct: 48 DVVVESPTGSGKTLAFVLPMMRMIQNAKLQPADIGALILSPSRELCSQIVSVIQPFAEKL 107
Query: 387 NAKCHACIGGTNVREDIRQLES-GVHVVVGTPGRVYDMI----TRRALHANTIKLFVLDE 551
N GG V ++I+ ++ V+++V TPGR++ +I T A T++L V+DE
Sbjct: 108 NLTVETVTGGQKVDKNIKMFKNKNVNILVATPGRLFQIIQHEKTLIARKMRTLQLLVIDE 167
Query: 552 ADEMLSRGFKDQIHDVFKMLSADVQVILLSAT 647
AD F+D + ++ + + L SAT
Sbjct: 168 ADRFNEIQFEDHMREILSCIPKQRRTGLFSAT 199
>AF079508-1|AAC28387.1| 1156|Caenorhabditis elegans germline RNA
helicase-4 protein.
Length = 1156
Score = 77.0 bits (181), Expect = 1e-14
Identities = 56/202 (27%), Positives = 97/202 (48%), Gaps = 15/202 (7%)
Frame = +3
Query: 102 TFDDMN-LKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKTATFSISIL 278
+FD L ++L + +P+ IQ+ + P + G DV+A A +G+GKT F I +
Sbjct: 736 SFDGFKILPQDLHDNLKRMKMNRPTPIQRASFFPIMHGNDVVACAHTGSGKTLAFLIPFV 795
Query: 279 QQI------DTSIRE----CQALILAPTRELAQQIQKVVIALGDHLNAKCHACIGGTNVR 428
++ D + + + LI+APTREL Q L KC GG +
Sbjct: 796 IKLMEEFEKDRDVTDEKPSPRLLIVAPTRELVNQTFTTARQLTYETGLKCGLAFGGYSRN 855
Query: 429 EDIRQLE--SGVHVVVGTPGRVYDMITRRALHANTIKLFVLDEADEML-SRGFKDQIHDV 599
+++ L S ++++V T GR+ D + + + +K VLDEAD M+ S F +++ +
Sbjct: 856 ANVQHLRSFSQLNILVATMGRLQDFVNAGEVSLSKMKYIVLDEADRMVDSNDFGEEVSKI 915
Query: 600 FKMLSADV-QVILLSATMPDDV 662
Q +L SA+ +D+
Sbjct: 916 IGSPGERTQQTVLFSASFSEDL 937
>AF039718-2|AAB96745.2| 1156|Caenorhabditis elegans Germ-line helicase
protein 4 protein.
Length = 1156
Score = 77.0 bits (181), Expect = 1e-14
Identities = 56/202 (27%), Positives = 97/202 (48%), Gaps = 15/202 (7%)
Frame = +3
Query: 102 TFDDMN-LKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKTATFSISIL 278
+FD L ++L + +P+ IQ+ + P + G DV+A A +G+GKT F I +
Sbjct: 736 SFDGFKILPQDLHDNLKRMKMNRPTPIQRASFFPIMHGNDVVACAHTGSGKTLAFLIPFV 795
Query: 279 QQI------DTSIRE----CQALILAPTRELAQQIQKVVIALGDHLNAKCHACIGGTNVR 428
++ D + + + LI+APTREL Q L KC GG +
Sbjct: 796 IKLMEEFEKDRDVTDEKPSPRLLIVAPTRELVNQTFTTARQLTYETGLKCGLAFGGYSRN 855
Query: 429 EDIRQLE--SGVHVVVGTPGRVYDMITRRALHANTIKLFVLDEADEML-SRGFKDQIHDV 599
+++ L S ++++V T GR+ D + + + +K VLDEAD M+ S F +++ +
Sbjct: 856 ANVQHLRSFSQLNILVATMGRLQDFVNAGEVSLSKMKYIVLDEADRMVDSNDFGEEVSKI 915
Query: 600 FKMLSADV-QVILLSATMPDDV 662
Q +L SA+ +D+
Sbjct: 916 IGSPGERTQQTVLFSASFSEDL 937
>U80447-1|AAB37806.1| 746|Caenorhabditis elegans Hypothetical
protein F55F8.2a protein.
Length = 746
Score = 75.4 bits (177), Expect = 3e-14
Identities = 56/200 (28%), Positives = 97/200 (48%), Gaps = 23/200 (11%)
Frame = +3
Query: 120 LKEELLRGIYAYGFEKPSAIQQRAIMPCIQGR-DVIAQAQSGTGKTATFSISILQQI--- 287
L E+L I GF +P+ IQ + ++ R DV+ A++G+GKT F I ++ ++
Sbjct: 162 LPNEVLEAIEQMGFSEPTEIQSAVLPAAVRDRQDVLGAAETGSGKTLAFGIPLVARLLES 221
Query: 288 --------DTSIRECQALILAPTRELAQQIQKVVIALGDHLNAKCHACIGG-TNVREDIR 440
T +R +ALI+APTREL QI K + AL + +GG V+++
Sbjct: 222 SDDSQETESTEVRGPRALIVAPTRELVIQIMKHINALISTTQLIATSIVGGLAQVKQERI 281
Query: 441 QLESGVHVVVGTPGRVYDMITRR-----ALHANTIKLFVLDEADEMLSRGFKDQIHDVFK 605
+ +VV TPGR++ M+ +K V+DE D M+ G+ ++ +
Sbjct: 282 ISQQRPDIVVATPGRLWAMMQEAETGEFLAEWKDLKCLVVDETDRMVEEGYFAELTHILN 341
Query: 606 MLSAD-----VQVILLSATM 650
+ + +Q ++ SAT+
Sbjct: 342 KIHEESEKEKLQTLVFSATL 361
>AC024830-10|AAF59610.3| 728|Caenorhabditis elegans Hypothetical
protein Y55F3BR.1 protein.
Length = 728
Score = 73.3 bits (172), Expect = 1e-13
Identities = 46/139 (33%), Positives = 72/139 (51%), Gaps = 5/139 (3%)
Frame = +3
Query: 210 GRDVIAQAQSGTGKTATFSISILQQIDTSIRECQALILAPTRELAQQIQKVVIALGDHLN 389
G +A AQ+ G +S + ID+S C +IL PTREL QQ + + L+
Sbjct: 252 GTQYVAVAQAEDGNLKWWSAAEQLSIDSSTPLC--VILEPTRELVQQTFQNIQTFASVLD 309
Query: 390 A---KCHACIGGTNVREDIRQLESGVHVVVGTPGRVYDMITRRALHANTIKLFVLDEADE 560
+ +C G N+ + +R LE+G +VVGTP RV+D+I L ++ V+DE D+
Sbjct: 310 SPKIRCVTLAAGENMNQILRTLETGCDIVVGTPSRVFDLIHTGKLATKNLQFVVIDEIDQ 369
Query: 561 MLS--RGFKDQIHDVFKML 611
L+ QI +F++L
Sbjct: 370 FLAGKNNCAHQIESIFRVL 388
Score = 42.3 bits (95), Expect = 3e-04
Identities = 19/59 (32%), Positives = 33/59 (55%)
Frame = +3
Query: 105 FDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKTATFSISILQ 281
F++ + EL + + + P+A+Q AI + G D + A++G+GKT FS+ I Q
Sbjct: 4 FEEFGIIPELSDALSSLNWTLPTAVQSEAIPAILGGADALIAAETGSGKTGAFSLPIAQ 62
>Z81094-7|CAB03153.2| 960|Caenorhabditis elegans Hypothetical
protein F58G11.2 protein.
Length = 960
Score = 71.7 bits (168), Expect = 4e-13
Identities = 48/178 (26%), Positives = 84/178 (47%), Gaps = 10/178 (5%)
Frame = +3
Query: 87 DQVVETFDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKTATFS 266
D + ++ + L +L + + IQ I + G DV+ QA++ GKTA F
Sbjct: 377 DVRLTSWTNSGLHPTILETLKRIKYNNVRTIQGAMIPQVLDGHDVLGQAETSAGKTAAFG 436
Query: 267 ISILQQI-----DTSIRECQ-----ALILAPTRELAQQIQKVVIALGDHLNAKCHACIGG 416
+ I+ +I +T + Q ALILAPTRELA QI + + + + G
Sbjct: 437 LPIIDKILRMDEETRNKARQDDGPLALILAPTRELAAQIHEALRTYCQNTDIIVLLSYGQ 496
Query: 417 TNVREDIRQLESGVHVVVGTPGRVYDMITRRALHANTIKLFVLDEADEMLSRGFKDQI 590
++ + ++ +G +++GT GR+ D + + ++ V DEAD +L KD +
Sbjct: 497 SDRARSLNEIRNGCDILIGTCGRIMDFTVKSHISLLHLRFLVFDEADRLLQDMKKDPL 554
>AF025451-4|AAL16306.1| 567|Caenorhabditis elegans Hypothetical
protein C24H12.4b protein.
Length = 567
Score = 70.5 bits (165), Expect = 1e-12
Identities = 40/117 (34%), Positives = 64/117 (54%)
Frame = +3
Query: 312 ALILAPTRELAQQIQKVVIALGDHLNAKCHACIGGTNVREDIRQLESGVHVVVGTPGRVY 491
A+I+APT+EL QI K+ + L L + N E+ LE HVVV TPG++
Sbjct: 99 AVIIAPTKELITQIYKLFVKLSQALPFLQAINLCDINEEENSVWLEDRSHVVVTTPGKLL 158
Query: 492 DMITRRALHANTIKLFVLDEADEMLSRGFKDQIHDVFKMLSADVQVILLSATMPDDV 662
M + R + + V+DEAD +LS G+++++ + L Q ++ SAT+ DD+
Sbjct: 159 RMCSLRPEYCTLVSYLVMDEADLLLSFGYEEEMIKIRSKLPPTYQCLMTSATLKDDM 215
>U80447-2|AAO38637.1| 579|Caenorhabditis elegans Hypothetical
protein F55F8.2b protein.
Length = 579
Score = 70.1 bits (164), Expect = 1e-12
Identities = 52/192 (27%), Positives = 94/192 (48%), Gaps = 23/192 (11%)
Frame = +3
Query: 144 IYAYGFEKPSAIQQRAIMPCIQGR-DVIAQAQSGTGKTATFSISILQQI----------- 287
I+ + F +P+ IQ + ++ R DV+ A++G+GKT F I ++ ++
Sbjct: 3 IFFFRFSEPTEIQSAVLPAAVRDRQDVLGAAETGSGKTLAFGIPLVARLLESSDDSQETE 62
Query: 288 DTSIRECQALILAPTRELAQQIQKVVIALGDHLNAKCHACIGG-TNVREDIRQLESGVHV 464
T +R +ALI+APTREL QI K + AL + +GG V+++ + +
Sbjct: 63 STEVRGPRALIVAPTRELVIQIMKHINALISTTQLIATSIVGGLAQVKQERIISQQRPDI 122
Query: 465 VVGTPGRVYDMITRR-----ALHANTIKLFVLDEADEMLSRGFKDQIHDVFKMLSAD--- 620
VV TPGR++ M+ +K V+DE D M+ G+ ++ + + +
Sbjct: 123 VVATPGRLWAMMQEAETGEFLAEWKDLKCLVVDETDRMVEEGYFAELTHILNKIHEESEK 182
Query: 621 --VQVILLSATM 650
+Q ++ SAT+
Sbjct: 183 EKLQTLVFSATL 194
>Z75546-3|CAA99891.1| 581|Caenorhabditis elegans Hypothetical
protein R05D11.4 protein.
Length = 581
Score = 58.4 bits (135), Expect = 4e-09
Identities = 48/207 (23%), Positives = 97/207 (46%), Gaps = 17/207 (8%)
Frame = +3
Query: 93 VVETFDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKTATFSIS 272
++ F D ++ LL + +PS IQ ++I + R+V+A A +G+GKT F++
Sbjct: 124 IILRFSDSSMSPSLLNRLSENSIRQPSPIQMQSIPFMTERRNVLASAPTGSGKTLAFALP 183
Query: 273 ILQQI----------DTSIRECQALILAPTRELAQQIQKVVIALGDHLNAKCHACIGGTN 422
++ +I ++ + A++L PTRELA Q + L + I N
Sbjct: 184 VIDEILELKQRADYSSSNSSKLLAVVLEPTRELAAQ------TYTEFLKYCANTSISAAN 237
Query: 423 VREDIRQLESGVHVVVGTPGRVYDMITRRALHANTIKLFVLDEADEML------SRGFKD 584
+ ++ ++V TP R+ + + + ++++ V+DE+D + + F++
Sbjct: 238 FSGEETDIQH-ADILVSTPNRIVFHLDK--IDTSSLRWLVVDESDRLFEVVEGQDKCFRN 294
Query: 585 QIHDVFKMLSAD-VQVILLSATMPDDV 662
Q+ ++K A +V SAT +V
Sbjct: 295 QLAAIYKACDAKCTRVAFFSATFSHEV 321
>L17337-1|AAP68928.1| 593|Caenorhabditis elegans Hypothetical
protein ZK686.2 protein.
Length = 593
Score = 53.6 bits (123), Expect = 1e-07
Identities = 39/138 (28%), Positives = 67/138 (48%), Gaps = 6/138 (4%)
Frame = +3
Query: 168 PSAIQQRAIMPCIQGRDVIAQAQSGTGKTATFSISILQQIDTS-IRECQALILAPTRELA 344
PS + P ++ RDV A +G+GKT + + +L + + + QA+IL P + L
Sbjct: 142 PSLFFEIRSPPPLRPRDVAIAAPTGSGKTICYVLPVLAAVGSKPSKILQAVILVPVQTLV 201
Query: 345 QQIQKVVIALGDHLN-AKCHACIGGTNVREDIRQLESG-VHVVVGTPGRVYDMITRR--- 509
QI D AK + G + ++ RQL S +V+V TP R+ +T +
Sbjct: 202 AQIVDEFKRWNDESGVAKVVSLSGANDFEKEARQLASDPPNVIVATPARLVQHLTSKIPP 261
Query: 510 ALHANTIKLFVLDEADEM 563
+ + ++ ++DEAD M
Sbjct: 262 PIDLSKLRFLIVDEADRM 279
>AF125963-6|AAK95885.1| 520|Caenorhabditis elegans Hypothetical
protein Y38A10A.6 protein.
Length = 520
Score = 35.9 bits (79), Expect = 0.026
Identities = 40/164 (24%), Positives = 74/164 (45%), Gaps = 13/164 (7%)
Frame = +3
Query: 171 SAIQQRAIMPCIQGRDVIAQAQSGTGKTATFSISILQ------QIDTSIRECQA---LIL 323
+A+QQ++I R ++ A +G GKT F I ++ + T+I + LIL
Sbjct: 116 NAVQQKSIQAIRDRRGLLVDAPTGIGKTYAFLIPAIEIALRERPLLTNISTTPSPTILIL 175
Query: 324 APTRELAQQIQ---KVVIALGDHLNAKCHACIGGTNVREDIRQLESGVHVVVGTPGRVYD 494
A T L +Q+ +V++ L D + I + + + + T G++
Sbjct: 176 ANTNSLVEQLFNRCEVLLGLIDMEDIIPIRDIKIEKLVASYQFTKDQCDIAFCTMGKLKA 235
Query: 495 MITRRALHANTIKLFVLDEADEMLSRG-FKDQIHDVFKMLSADV 623
I + + + +K+ +LDE+D+M+ F + I V L DV
Sbjct: 236 SIEDKTILLDNLKMMILDESDKMIDIACFGNDIDWVLDQLQEDV 279
>AL110485-3|CAB60351.1| 2145|Caenorhabditis elegans Hypothetical
protein Y46G5A.4 protein.
Length = 2145
Score = 35.5 bits (78), Expect = 0.034
Identities = 31/136 (22%), Positives = 64/136 (47%), Gaps = 4/136 (2%)
Frame = +3
Query: 156 GFEKPSAIQQRAIMPCIQGRD-VIAQAQSGTGKTATFSISILQQIDTSIRECQALILAPT 332
GF+ + IQ + + + VI A +G+GKTA +++L+ + + E +A+ + P
Sbjct: 1318 GFKVFNPIQTQVFRTVFESNENVIVCAPNGSGKTAIAELAVLRHFENT-PEAKAVYITPM 1376
Query: 333 RELAQQIQKVVIALGDHLNAKCHACIGGTNVREDIRQLESGVHVVVGTPGRVYDMITRR- 509
++A ++ + + G D++ + G +++ TP R +D I+RR
Sbjct: 1377 EDMATKVYADWKRRLEPAIGHTIVLLTGEQTM-DLKLAQRG-QLIISTPER-WDNISRRW 1433
Query: 510 --ALHANTIKLFVLDE 551
+KLF+ D+
Sbjct: 1434 KQRKSVQNVKLFIADD 1449
>AL132948-1|CAC51077.1| 735|Caenorhabditis elegans Hypothetical
protein Y39B6A.1 protein.
Length = 735
Score = 33.5 bits (73), Expect = 0.14
Identities = 15/32 (46%), Positives = 17/32 (53%), Gaps = 1/32 (3%)
Frame = -1
Query: 468 PPHEHHSPVGEYLHG-HWCHQCKHGI*HSSDH 376
P HEHH G++ HG H H HG HS H
Sbjct: 635 PHHEHHEHHGDHHHGSHGVHHGHHGTHHSLAH 666
Score = 29.5 bits (63), Expect = 2.2
Identities = 23/76 (30%), Positives = 30/76 (39%), Gaps = 1/76 (1%)
Frame = -1
Query: 597 HHGS-GP*NLWTTFHQLHQEQKV*WCWHEAHDELSYHIHDLECPPPHEHHSPVGEYLHGH 421
HHG G + H H E H +H ++H H E HH+P HGH
Sbjct: 525 HHGHHGEHHHAPAHHGHHGEHGTHHGHHGSHHSPAHHGHHGE-----HHHAPAH---HGH 576
Query: 420 WCHQCKHGI*HSSDHQ 373
H HG+ H H+
Sbjct: 577 HGHHGSHGV-HHGHHE 591
>U53141-4|AAA96106.1| 528|Caenorhabditis elegans Mutator protein 14
protein.
Length = 528
Score = 33.1 bits (72), Expect = 0.18
Identities = 22/82 (26%), Positives = 40/82 (48%), Gaps = 1/82 (1%)
Frame = +3
Query: 171 SAIQQRAIMPCIQGRDVIAQAQSGTGKTATFSISILQQIDTSIRECQALILAPTRELAQ- 347
+A+QQ +I +GR ++ +A +G GKT F ++ I+ +++ Q+ T+
Sbjct: 117 NAVQQMSIQVIREGRGLVVEAPTGIGKTYAF---LIPAIEAALKNRQSNCFEYTKPSPSI 173
Query: 348 QIQKVVIALGDHLNAKCHACIG 413
I AL D L +C +G
Sbjct: 174 LIMASTSALVDQLFNRCELILG 195
>AF003740-7|AAC48142.2| 625|Caenorhabditis elegans Hypothetical
protein C41D11.7 protein.
Length = 625
Score = 32.3 bits (70), Expect = 0.32
Identities = 22/74 (29%), Positives = 35/74 (47%), Gaps = 1/74 (1%)
Frame = +3
Query: 219 VIAQAQSGTGKTATFSISILQQIDTSIRECQALILAPTRELAQQIQKVVIALGDHLNAKC 398
V Q GTGKT T ++ + + I ++ Q ++LAPTRE I+ + + K
Sbjct: 85 VCIQGPPGTGKTFTLTLLLCRLIQ---QKKQVVVLAPTREALANIRMMTKKTLKRMGIKV 141
Query: 399 HA-CIGGTNVREDI 437
H + TN D+
Sbjct: 142 HEHALMDTNEYRDV 155
>U64840-7|AAB04965.1| 340|Caenorhabditis elegans Hypothetical
protein ZC317.1 protein.
Length = 340
Score = 31.1 bits (67), Expect = 0.73
Identities = 21/80 (26%), Positives = 37/80 (46%), Gaps = 1/80 (1%)
Frame = +3
Query: 177 IQQRAIMPCIQGRDVIAQAQSGTGKTATFSISILQQIDTSIRECQALILAPTRELAQ-QI 353
+QQ +I +GR ++ +A +G GKT F ++ I+ ++ Q+ T+ I
Sbjct: 19 VQQMSIQVIREGRGLVVEAPTGIGKTYAF---LIPAIEAALENRQSNCFESTKPSPSILI 75
Query: 354 QKVVIALGDHLNAKCHACIG 413
AL D L +C +G
Sbjct: 76 MASTSALVDQLFNRCELILG 95
>Z83123-10|CAB05609.2| 988|Caenorhabditis elegans Hypothetical
protein T04A11.6 protein.
Length = 988
Score = 29.5 bits (63), Expect = 2.2
Identities = 32/139 (23%), Positives = 56/139 (40%), Gaps = 5/139 (3%)
Frame = +3
Query: 153 YGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKTATFSIS--ILQQIDTSIRECQALI-- 320
+GF + Q++ I+ + G D +G GK+ + + IL + + ++LI
Sbjct: 243 FGFNQFRHRQKQCILSTLMGHDTFVLMPTGAGKSLCYQLPAVILPGVTVVVSPLRSLIED 302
Query: 321 -LAPTRELAQQIQKVVIALGDHLNAKCHACIGGTNVREDIRQLESGVHVVVGTPGRVYDM 497
+EL + + LG K +A +G N + + G V+
Sbjct: 303 QKMKMKELGIGCEALTADLGAPAQEKIYAELGSGNPSIKLLYVTPEKISASGRLNSVFFD 362
Query: 498 ITRRALHANTIKLFVLDEA 554
+ RR L A FV+DEA
Sbjct: 363 LHRRGLLAR----FVIDEA 377
>AY095296-1|AAM26298.1| 988|Caenorhabditis elegans RecQ helicase
protein.
Length = 988
Score = 29.5 bits (63), Expect = 2.2
Identities = 32/139 (23%), Positives = 56/139 (40%), Gaps = 5/139 (3%)
Frame = +3
Query: 153 YGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKTATFSIS--ILQQIDTSIRECQALI-- 320
+GF + Q++ I+ + G D +G GK+ + + IL + + ++LI
Sbjct: 243 FGFNQFRHRQKQCILSTLMGHDTFVLMPTGAGKSLCYQLPAVILPGVTVVVSPLRSLIED 302
Query: 321 -LAPTRELAQQIQKVVIALGDHLNAKCHACIGGTNVREDIRQLESGVHVVVGTPGRVYDM 497
+EL + + LG K +A +G N + + G V+
Sbjct: 303 QKMKMKELGIGCEALTADLGAPAQEKIYAELGSGNPSIKLLYVTPEKISASGRLNSVFFD 362
Query: 498 ITRRALHANTIKLFVLDEA 554
+ RR L A FV+DEA
Sbjct: 363 LHRRGLLAR----FVIDEA 377
>U80437-18|AAB37629.1| 518|Caenorhabditis elegans Cell division
cycle related protein6 protein.
Length = 518
Score = 28.7 bits (61), Expect = 3.9
Identities = 12/30 (40%), Positives = 19/30 (63%)
Frame = +3
Query: 219 VIAQAQSGTGKTATFSISILQQIDTSIREC 308
+ Q GTGKTAT ++ +L+ + S+R C
Sbjct: 198 IYVSGQPGTGKTAT-TMRVLKSLGKSVRSC 226
>U20864-1|AAC46663.1| 243|Caenorhabditis elegans Hypothetical
protein F32A5.4a protein.
Length = 243
Score = 28.7 bits (61), Expect = 3.9
Identities = 17/52 (32%), Positives = 24/52 (46%)
Frame = +3
Query: 405 CIGGTNVREDIRQLESGVHVVVGTPGRVYDMITRRALHANTIKLFVLDEADE 560
C G D RQL G V G G ++T L+AN I+L L +++
Sbjct: 10 CAVGVASHRDKRQLSIGTISVSGAGGSTGCVVTGNVLYANGIRLRNLTSSEQ 61
>AF480439-1|AAM76083.1| 1037|Caenorhabditis elegans dicer-related
helicase protein.
Length = 1037
Score = 28.7 bits (61), Expect = 3.9
Identities = 24/109 (22%), Positives = 46/109 (42%), Gaps = 3/109 (2%)
Frame = +3
Query: 180 QQRAIMPCIQGRDVIAQAQSGTGKTATFSISILQQIDTSIRE---CQALILAPTRELAQQ 350
Q+ +QG++ I A +G+GKT + I + ++ E +AL + P + Q
Sbjct: 297 QEELCQVALQGKNTIVTAPTGSGKTVIAANIIKEHFESRSSEGKRFKALFMTPNSMILNQ 356
Query: 351 IQKVVIALGDHLNAKCHACIGGTNVREDIRQLESGVHVVVGTPGRVYDM 497
+ + DH+ G NV R + ++V TP + ++
Sbjct: 357 QAASISSYLDHV-YHTQIIQGSDNV--PTRNVIQSKDLIVATPQMIVNL 402
>AF036696-4|AAB88350.1| 1037|Caenorhabditis elegans Dicer related
helicase protein 1 protein.
Length = 1037
Score = 28.7 bits (61), Expect = 3.9
Identities = 24/109 (22%), Positives = 46/109 (42%), Gaps = 3/109 (2%)
Frame = +3
Query: 180 QQRAIMPCIQGRDVIAQAQSGTGKTATFSISILQQIDTSIRE---CQALILAPTRELAQQ 350
Q+ +QG++ I A +G+GKT + I + ++ E +AL + P + Q
Sbjct: 297 QEELCQVALQGKNTIVTAPTGSGKTVIAANIIKEHFESRSSEGKRFKALFMTPNSMILNQ 356
Query: 351 IQKVVIALGDHLNAKCHACIGGTNVREDIRQLESGVHVVVGTPGRVYDM 497
+ + DH+ G NV R + ++V TP + ++
Sbjct: 357 QAASISSYLDHV-YHTQIIQGSDNV--PTRNVIQSKDLIVATPQMIVNL 402
>AF039715-5|AAB96730.1| 391|Caenorhabditis elegans Hypothetical
protein R06A10.4 protein.
Length = 391
Score = 27.9 bits (59), Expect = 6.8
Identities = 12/29 (41%), Positives = 16/29 (55%)
Frame = -1
Query: 522 WHEAHDELSYHIHDLECPPPHEHHSPVGE 436
+H+AH + H CPPPH P+GE
Sbjct: 25 FHKAH--IDPHALAQTCPPPHGGEMPLGE 51
>Z48544-1|CAA88435.1| 473|Caenorhabditis elegans Hypothetical
protein ZK945.1 protein.
Length = 473
Score = 27.5 bits (58), Expect = 9.1
Identities = 10/24 (41%), Positives = 15/24 (62%)
Frame = -1
Query: 330 WEPGSKLDIHECLYRFVVESI*RK 259
WEPG+K H Y ++V+ I R+
Sbjct: 210 WEPGTKSGYHAITYGWIVDQIVRR 233
>U61947-10|AAB03132.1| 932|Caenorhabditis elegans Kinesin-like
protein protein 18 protein.
Length = 932
Score = 27.5 bits (58), Expect = 9.1
Identities = 14/41 (34%), Positives = 22/41 (53%)
Frame = +3
Query: 273 ILQQIDTSIRECQALILAPTRELAQQIQKVVIALGDHLNAK 395
+ Q +DT +ECQ L + + E + +V+ D LNAK
Sbjct: 114 VFQHLDTKAKECQKLTFSVSVEFVELYNEVIY---DLLNAK 151
>AY211948-1|AAO34669.1| 932|Caenorhabditis elegans kinesin-like
protein-18 protein.
Length = 932
Score = 27.5 bits (58), Expect = 9.1
Identities = 14/41 (34%), Positives = 22/41 (53%)
Frame = +3
Query: 273 ILQQIDTSIRECQALILAPTRELAQQIQKVVIALGDHLNAK 395
+ Q +DT +ECQ L + + E + +V+ D LNAK
Sbjct: 114 VFQHLDTKAKECQKLTFSVSVEFVELYNEVIY---DLLNAK 151
>AL132876-20|CAD92404.1| 1127|Caenorhabditis elegans Hypothetical
protein Y105E8A.24b protein.
Length = 1127
Score = 27.5 bits (58), Expect = 9.1
Identities = 22/76 (28%), Positives = 36/76 (47%)
Frame = +3
Query: 237 SGTGKTATFSISILQQIDTSIRECQALILAPTRELAQQIQKVVIALGDHLNAKCHACIGG 416
+ T S+ +L++ + IRE Q +LA ELA++ QK + A + + K A
Sbjct: 1034 TSTATAVDDSMEMLRKKEKEIRELQQKVLADRDELAEK-QKAIDAQEEEIQTKWAAL--- 1089
Query: 417 TNVREDIRQLESGVHV 464
I Q +S +HV
Sbjct: 1090 --QARSIEQQQSPMHV 1103
>AL132876-19|CAD21673.1| 1161|Caenorhabditis elegans Hypothetical
protein Y105E8A.24a protein.
Length = 1161
Score = 27.5 bits (58), Expect = 9.1
Identities = 22/76 (28%), Positives = 36/76 (47%)
Frame = +3
Query: 237 SGTGKTATFSISILQQIDTSIRECQALILAPTRELAQQIQKVVIALGDHLNAKCHACIGG 416
+ T S+ +L++ + IRE Q +LA ELA++ QK + A + + K A
Sbjct: 1034 TSTATAVDDSMEMLRKKEKEIRELQQKVLADRDELAEK-QKAIDAQEEEIQTKWAAL--- 1089
Query: 417 TNVREDIRQLESGVHV 464
I Q +S +HV
Sbjct: 1090 --QARSIEQQQSPMHV 1103
>AC006792-2|AAF60742.3| 406|Caenorhabditis elegans Hypothetical
protein Y50C1A.2 protein.
Length = 406
Score = 27.5 bits (58), Expect = 9.1
Identities = 13/46 (28%), Positives = 24/46 (52%)
Frame = -2
Query: 629 DLNIS*QHLEDIMDLVLETSGQHFISFIKNKKFDGVGMKRTTSYHI 492
D+ IS + L + D V + S ++ ++ KFD V ++ YH+
Sbjct: 66 DITISKEVLNLLYDFVRDDSKVNYDRLLEFHKFDKVALETVQKYHV 111
>AB033538-1|BAB19356.2| 930|Caenorhabditis elegans kinesin like
protein KLP-18 protein.
Length = 930
Score = 27.5 bits (58), Expect = 9.1
Identities = 14/41 (34%), Positives = 22/41 (53%)
Frame = +3
Query: 273 ILQQIDTSIRECQALILAPTRELAQQIQKVVIALGDHLNAK 395
+ Q +DT +ECQ L + + E + +V+ D LNAK
Sbjct: 112 VFQHLDTKAKECQKLTFSVSVEFVELYNEVIY---DLLNAK 149
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,987,864
Number of Sequences: 27780
Number of extensions: 396438
Number of successful extensions: 1215
Number of sequences better than 10.0: 71
Number of HSP's better than 10.0 without gapping: 1083
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1146
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1497472076
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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