Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= brS-1110
         (482 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292365-1|CAL23177.1|  313|Tribolium castaneum gustatory recept...    23   1.5  
AM292325-1|CAL23137.2|  309|Tribolium castaneum gustatory recept...    23   1.5  
DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 pro...    23   2.0  
DQ855498-1|ABH88185.1|  127|Tribolium castaneum chemosensory pro...    22   3.4  
AY884063-1|AAX84204.1|  682|Tribolium castaneum pro-phenol oxida...    22   3.4  
AJ973445-1|CAJ01492.1|  127|Tribolium castaneum hypothetical pro...    21   4.5  
AY884065-1|AAX84206.1|  697|Tribolium castaneum laccase 1 protein.     21   6.0  
AF356647-1|AAK43700.1| 1156|Tribolium castaneum teashirt-like pr...    21   6.0  

>AM292365-1|CAL23177.1|  313|Tribolium castaneum gustatory receptor
           candidate 44 protein.
          Length = 313

 Score = 23.0 bits (47), Expect = 1.5
 Identities = 12/31 (38%), Positives = 16/31 (51%)
 Frame = -2

Query: 478 FFFFLSTTICLFIYSVDINSYEILKYIVNTL 386
           F+FF+ST    F     I +Y+   YI N L
Sbjct: 239 FYFFISTFFYFFTTGNIIATYDKQFYIHNAL 269


>AM292325-1|CAL23137.2|  309|Tribolium castaneum gustatory receptor
           candidate 4 protein.
          Length = 309

 Score = 23.0 bits (47), Expect = 1.5
 Identities = 12/31 (38%), Positives = 16/31 (51%)
 Frame = -2

Query: 478 FFFFLSTTICLFIYSVDINSYEILKYIVNTL 386
           F+FF+ST    F     I +Y+   YI N L
Sbjct: 235 FYFFISTFFYFFTTGNIIATYDKQFYIHNAL 265


>DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 protein.
          Length = 2700

 Score = 22.6 bits (46), Expect = 2.0
 Identities = 11/23 (47%), Positives = 12/23 (52%)
 Frame = +2

Query: 230  PKTTTLMETATNLSTTVHITWTV 298
            P TT   +T T  STT   T TV
Sbjct: 1177 PSTTNHWQTKTTTSTTTRPTTTV 1199


>DQ855498-1|ABH88185.1|  127|Tribolium castaneum chemosensory
           protein 12 protein.
          Length = 127

 Score = 21.8 bits (44), Expect = 3.4
 Identities = 10/28 (35%), Positives = 15/28 (53%)
 Frame = -2

Query: 160 RDGLRTLVQYLLARIRVDRLRAEKSQDP 77
           +DG RT+++YL+   R      E   DP
Sbjct: 81  KDGSRTIIRYLIKNKRDWWNELEAKYDP 108


>AY884063-1|AAX84204.1|  682|Tribolium castaneum pro-phenol oxidase
           subunit 1 protein.
          Length = 682

 Score = 21.8 bits (44), Expect = 3.4
 Identities = 9/20 (45%), Positives = 13/20 (65%)
 Frame = -2

Query: 160 RDGLRTLVQYLLARIRVDRL 101
           RDG+ TL Q+L   +RV  +
Sbjct: 648 RDGVDTLQQFLTPNMRVQEV 667


>AJ973445-1|CAJ01492.1|  127|Tribolium castaneum hypothetical
           protein protein.
          Length = 127

 Score = 21.4 bits (43), Expect = 4.5
 Identities = 10/28 (35%), Positives = 15/28 (53%)
 Frame = -2

Query: 160 RDGLRTLVQYLLARIRVDRLRAEKSQDP 77
           +DG RT+++YL+   R      E   DP
Sbjct: 81  QDGSRTIIRYLIKNKRDWWNELEAKYDP 108


>AY884065-1|AAX84206.1|  697|Tribolium castaneum laccase 1 protein.
          Length = 697

 Score = 21.0 bits (42), Expect = 6.0
 Identities = 7/18 (38%), Positives = 12/18 (66%)
 Frame = +1

Query: 211 PYIVNPPKDYNPNGNGYE 264
           P+IV  P++ NP+   Y+
Sbjct: 192 PFIVRVPEEDNPHAKLYD 209


>AF356647-1|AAK43700.1| 1156|Tribolium castaneum teashirt-like
           protein protein.
          Length = 1156

 Score = 21.0 bits (42), Expect = 6.0
 Identities = 10/31 (32%), Positives = 14/31 (45%)
 Frame = +2

Query: 155 VPTTDPRGQETATNLLTTARTSLILPKTTTL 247
           VPT  P G      L   A  +L+ P+T  +
Sbjct: 115 VPTLSPVGVALPPTLPAAAAAALLPPQTAAM 145


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 117,213
Number of Sequences: 336
Number of extensions: 2649
Number of successful extensions: 9
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9
length of database: 122,585
effective HSP length: 52
effective length of database: 105,113
effective search space used: 11352204
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.2 bits)