Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= brS-1110
(482 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
CR457114-1|CAG33395.1| 364|Homo sapiens HAVCR1 protein. 33 0.40
BC013325-1|AAH13325.1| 364|Homo sapiens HAVCR1 protein protein. 33 0.40
M22405-1|AAA36334.1| 278|Homo sapiens protein ( Human intestina... 32 0.92
M57417-1|AAA63229.2| 294|Homo sapiens mucin protein. 31 1.6
AF043724-1|AAC39862.1| 359|Homo sapiens hepatitis A virus cellu... 31 1.6
L21998-1|AAB95295.1| 5179|Homo sapiens mucin protein. 31 2.8
Z72496-1|CAA96577.1| 3570|Homo sapiens mucin MUC5B protein. 29 6.5
BC112148-1|AAI12149.1| 466|Homo sapiens GRINL1A combined protei... 29 6.5
BC101645-1|AAI01646.1| 466|Homo sapiens GRINL1A combined protei... 29 6.5
AY353058-1|AAQ76834.1| 438|Homo sapiens GRINL1A combined protei... 29 6.5
AY353057-1|AAQ76833.1| 466|Homo sapiens GRINL1A combined protei... 29 6.5
AY334561-1|AAQ76828.1| 379|Homo sapiens GRINL1A complex protein... 29 6.5
AY334560-1|AAQ76827.1| 407|Homo sapiens GRINL1A complex protein... 29 6.5
AY333779-1|AAQ76826.1| 414|Homo sapiens GRINL1A complex protein... 29 6.5
AY331564-1|AAQ76825.1| 390|Homo sapiens GRINL1A combined protei... 29 6.5
AY307930-1|AAQ73824.1| 340|Homo sapiens intestinal mucin MUC3A ... 29 6.5
AY237639-1|AAP75897.1| 438|Homo sapiens GRINL1A upstream protei... 29 6.5
AY208913-1|AAP41549.1| 445|Homo sapiens GRINL1A complex protein... 29 6.5
AY207459-1|AAP41548.1| 466|Homo sapiens GRINL1A upstream protei... 29 6.5
AY207007-1|AAO39707.1| 550|Homo sapiens GRINL1A complex protein... 29 6.5
AK055535-1|BAB70944.1| 466|Homo sapiens protein ( Homo sapiens ... 29 6.5
U50078-1|AAD12586.1| 4861|Homo sapiens p532 protein. 29 8.6
AY048121-1|AAK85703.1| 659|Homo sapiens RAS guanyl releasing pr... 29 8.6
AY048119-1|AAK85701.1| 673|Homo sapiens RAS guanyl releasing pr... 29 8.6
AJ007509-1|CAA07548.1| 856|Homo sapiens E1B-55kDa-associated pr... 29 8.6
>CR457114-1|CAG33395.1| 364|Homo sapiens HAVCR1 protein.
Length = 364
Score = 33.5 bits (73), Expect = 0.40
Identities = 22/65 (33%), Positives = 35/65 (53%)
Frame = +2
Query: 152 TVPTTDPRGQETATNLLTTARTSLILPKTTTLMETATNLSTTVHITWTVPKADLTSSLPL 331
TVPTT T TT T++ +P TTT++ T T +STT + T T+S+P+
Sbjct: 149 TVPTTTTVPMTTVPT--TTVPTTMSIPTTTTVLTTMT-VSTTTSVP-TTTSIPTTTSVPV 204
Query: 332 SLVLA 346
+ ++
Sbjct: 205 TTTVS 209
Score = 29.9 bits (64), Expect = 4.9
Identities = 17/39 (43%), Positives = 23/39 (58%)
Frame = +2
Query: 185 TATNLLTTARTSLILPKTTTLMETATNLSTTVHITWTVP 301
T +TT RTS +P TTT+ T T +TTV T ++P
Sbjct: 136 TTVPTVTTVRTSTTVPTTTTVPMT-TVPTTTVPTTMSIP 173
Score = 29.5 bits (63), Expect = 6.5
Identities = 22/62 (35%), Positives = 29/62 (46%)
Frame = +2
Query: 146 T*TVPTTDPRGQETATNLLTTARTSLILPKTTTLMETATNLSTTVHITWTVPKADLTSSL 325
T TVPTT T T +LTT S TTT + T T++ TT + T + +
Sbjct: 163 TTTVPTT--MSIPTTTTVLTTMTVS-----TTTSVPTTTSIPTTTSVPVTTTVSTFVPPM 215
Query: 326 PL 331
PL
Sbjct: 216 PL 217
>BC013325-1|AAH13325.1| 364|Homo sapiens HAVCR1 protein protein.
Length = 364
Score = 33.5 bits (73), Expect = 0.40
Identities = 22/65 (33%), Positives = 35/65 (53%)
Frame = +2
Query: 152 TVPTTDPRGQETATNLLTTARTSLILPKTTTLMETATNLSTTVHITWTVPKADLTSSLPL 331
TVPTT T TT T++ +P TTT++ T T +STT + T T+S+P+
Sbjct: 149 TVPTTTTVPMTTVPT--TTVPTTMSIPTTTTVLTTMT-VSTTTSVP-TTTSIPTTTSVPV 204
Query: 332 SLVLA 346
+ ++
Sbjct: 205 TTTVS 209
Score = 29.9 bits (64), Expect = 4.9
Identities = 17/39 (43%), Positives = 23/39 (58%)
Frame = +2
Query: 185 TATNLLTTARTSLILPKTTTLMETATNLSTTVHITWTVP 301
T +TT RTS +P TTT+ T T +TTV T ++P
Sbjct: 136 TTVPTVTTVRTSTTVPTTTTVPMT-TVPTTTVPTTMSIP 173
Score = 29.5 bits (63), Expect = 6.5
Identities = 22/62 (35%), Positives = 29/62 (46%)
Frame = +2
Query: 146 T*TVPTTDPRGQETATNLLTTARTSLILPKTTTLMETATNLSTTVHITWTVPKADLTSSL 325
T TVPTT T T +LTT S TTT + T T++ TT + T + +
Sbjct: 163 TTTVPTT--MSIPTTTTVLTTMTVS-----TTTSVPTTTSIPTTTSVPVTTTVSTFVPPM 215
Query: 326 PL 331
PL
Sbjct: 216 PL 217
>M22405-1|AAA36334.1| 278|Homo sapiens protein ( Human intestinal
mucin mRNA, partial cds, clone SMUC 41. ).
Length = 278
Score = 32.3 bits (70), Expect = 0.92
Identities = 25/72 (34%), Positives = 34/72 (47%), Gaps = 4/72 (5%)
Frame = +2
Query: 146 T*TVPTTDPRGQETATN-LLTTARTSLILP-KTTTLMETATNLSTTVHITWT-VPKADLT 316
T PT P G +T T L+TT T P T+T T T ++TT +T T P T
Sbjct: 39 TTVTPTPTPTGTQTPTTVLITTTTTMTPTPTPTSTKSTTVTPITTTTTVTATPTPTGTQT 98
Query: 317 -SSLPLSLVLAV 349
+ +P+S V
Sbjct: 99 PTMIPISTTTTV 110
>M57417-1|AAA63229.2| 294|Homo sapiens mucin protein.
Length = 294
Score = 31.5 bits (68), Expect = 1.6
Identities = 18/55 (32%), Positives = 25/55 (45%)
Frame = +2
Query: 158 PTTDPRGQETATNLLTTARTSLILPKTTTLMETATNLSTTVHITWTVPKADLTSS 322
PT P G +T T T T+++ P T T+ T T T + T P TS+
Sbjct: 2 PTPTPTGTQTPTPTPITTTTTMVTP-TPTITSTQTPTPTPITTTTVTPTPTPTST 55
Score = 31.5 bits (68), Expect = 1.6
Identities = 18/55 (32%), Positives = 25/55 (45%)
Frame = +2
Query: 158 PTTDPRGQETATNLLTTARTSLILPKTTTLMETATNLSTTVHITWTVPKADLTSS 322
PT P G +T T T T+++ P T T+ T T T + T P TS+
Sbjct: 222 PTPTPTGTQTPTPTPITTTTTMVTP-TPTITSTQTPTPTPITTTTVTPTPTPTST 275
Score = 29.1 bits (62), Expect = 8.6
Identities = 21/63 (33%), Positives = 27/63 (42%), Gaps = 2/63 (3%)
Frame = +2
Query: 146 T*TVPTTDPRGQETATNL-LTTARTSLILPKTT-TLMETATNLSTTVHITWTVPKADLTS 319
T PT P G +T T +TT T P T T T T ++TT +T T S
Sbjct: 149 TTVTPTPTPTGTQTPTTTPITTTTTVTPTPTPTGTRYPTPTPITTTTTVTPTPTPTSTQS 208
Query: 320 SLP 328
+ P
Sbjct: 209 TTP 211
>AF043724-1|AAC39862.1| 359|Homo sapiens hepatitis A virus cellular
receptor 1 protein.
Length = 359
Score = 31.5 bits (68), Expect = 1.6
Identities = 18/51 (35%), Positives = 26/51 (50%), Gaps = 3/51 (5%)
Frame = +2
Query: 185 TATNLLTTARTSLILPKTTTLMETATNLSTTVHITWTVP---KADLTSSLP 328
T +TT RTS +P TTT+ T + ++ T TVP T+S+P
Sbjct: 136 TTVPTVTTVRTSTTVPTTTTVPTTTVPTTMSIPTTTTVPTTMTVSTTTSVP 186
Score = 29.9 bits (64), Expect = 4.9
Identities = 21/67 (31%), Positives = 33/67 (49%)
Frame = +2
Query: 146 T*TVPTTDPRGQETATNLLTTARTSLILPKTTTLMETATNLSTTVHITWTVPKADLTSSL 325
T T T T T TT T++ +P TTT+ T T +STT + T T+S+
Sbjct: 140 TVTTVRTSTTVPTTTTVPTTTVPTTMSIPTTTTVPTTMT-VSTTTSVP-TTTSIPTTTSV 197
Query: 326 PLSLVLA 346
P++ ++
Sbjct: 198 PVTTTVS 204
>L21998-1|AAB95295.1| 5179|Homo sapiens mucin protein.
Length = 5179
Score = 30.7 bits (66), Expect = 2.8
Identities = 21/71 (29%), Positives = 30/71 (42%)
Frame = +2
Query: 83 LAFLGP*SVNPDTCQ*VLDQRT*TVPTTDPRGQETATNLLTTARTSLILPKTTTLMETAT 262
+AF +N C+ V T T TT+ T T + TT + T T T T
Sbjct: 1863 MAFCLNYEINVQCCECVTQPTTMTTTTTENPTPPTTTPITTTTTVTPTPTPTGTQTPTTT 1922
Query: 263 NLSTTVHITWT 295
++TT +T T
Sbjct: 1923 PITTTTTVTPT 1933
Score = 30.3 bits (65), Expect = 3.7
Identities = 22/61 (36%), Positives = 27/61 (44%)
Frame = +2
Query: 146 T*TVPTTDPRGQETATNLLTTARTSLILPKTTTLMETATNLSTTVHITWTVPKADLTSSL 325
T PT P G +T T T T++ T T T T H T T P A+LT+S
Sbjct: 4159 TTVTPTPTPTGTQTPTTTPITTTTTV----TPTPTPTGTQTGPPTH-TSTAPIAELTTSN 4213
Query: 326 P 328
P
Sbjct: 4214 P 4214
>Z72496-1|CAA96577.1| 3570|Homo sapiens mucin MUC5B protein.
Length = 3570
Score = 29.5 bits (63), Expect = 6.5
Identities = 15/44 (34%), Positives = 23/44 (52%)
Frame = +2
Query: 185 TATNLLTTARTSLILPKTTTLMETATNLSTTVHITWTVPKADLT 316
T T+ L+T++ P+T T M TN +T+ T PK + T
Sbjct: 424 TLTSELSTSQAETSTPRTETTMSPLTNTTTSQGTTRCQPKCEWT 467
>BC112148-1|AAI12149.1| 466|Homo sapiens GRINL1A combined protein
protein.
Length = 466
Score = 29.5 bits (63), Expect = 6.5
Identities = 13/29 (44%), Positives = 17/29 (58%)
Frame = -3
Query: 105 DYGPRKARIRVRDENLSVGHSQQSEDENH 19
DY + +IR + LSV H+QQ ENH
Sbjct: 121 DYDEMRQKIRQLTQELSVSHAQQEYLENH 149
>BC101645-1|AAI01646.1| 466|Homo sapiens GRINL1A combined protein
protein.
Length = 466
Score = 29.5 bits (63), Expect = 6.5
Identities = 13/29 (44%), Positives = 17/29 (58%)
Frame = -3
Query: 105 DYGPRKARIRVRDENLSVGHSQQSEDENH 19
DY + +IR + LSV H+QQ ENH
Sbjct: 121 DYDEMRQKIRQLTQELSVSHAQQEYLENH 149
>AY353058-1|AAQ76834.1| 438|Homo sapiens GRINL1A combined protein
Gcom9 precursor protein.
Length = 438
Score = 29.5 bits (63), Expect = 6.5
Identities = 13/29 (44%), Positives = 17/29 (58%)
Frame = -3
Query: 105 DYGPRKARIRVRDENLSVGHSQQSEDENH 19
DY + +IR + LSV H+QQ ENH
Sbjct: 121 DYDEMRQKIRQLTQELSVSHAQQEYLENH 149
>AY353057-1|AAQ76833.1| 466|Homo sapiens GRINL1A combined protein
Gcom8 precursor protein.
Length = 466
Score = 29.5 bits (63), Expect = 6.5
Identities = 13/29 (44%), Positives = 17/29 (58%)
Frame = -3
Query: 105 DYGPRKARIRVRDENLSVGHSQQSEDENH 19
DY + +IR + LSV H+QQ ENH
Sbjct: 121 DYDEMRQKIRQLTQELSVSHAQQEYLENH 149
>AY334561-1|AAQ76828.1| 379|Homo sapiens GRINL1A complex protein
Gcom5 precursor protein.
Length = 379
Score = 29.5 bits (63), Expect = 6.5
Identities = 13/29 (44%), Positives = 17/29 (58%)
Frame = -3
Query: 105 DYGPRKARIRVRDENLSVGHSQQSEDENH 19
DY + +IR + LSV H+QQ ENH
Sbjct: 121 DYDEMRQKIRQLTQELSVSHAQQEYLENH 149
>AY334560-1|AAQ76827.1| 407|Homo sapiens GRINL1A complex protein
Gcom4 precursor protein.
Length = 407
Score = 29.5 bits (63), Expect = 6.5
Identities = 13/29 (44%), Positives = 17/29 (58%)
Frame = -3
Query: 105 DYGPRKARIRVRDENLSVGHSQQSEDENH 19
DY + +IR + LSV H+QQ ENH
Sbjct: 121 DYDEMRQKIRQLTQELSVSHAQQEYLENH 149
>AY333779-1|AAQ76826.1| 414|Homo sapiens GRINL1A complex protein
Gcom3 precursor protein.
Length = 414
Score = 29.5 bits (63), Expect = 6.5
Identities = 13/29 (44%), Positives = 17/29 (58%)
Frame = -3
Query: 105 DYGPRKARIRVRDENLSVGHSQQSEDENH 19
DY + +IR + LSV H+QQ ENH
Sbjct: 121 DYDEMRQKIRQLTQELSVSHAQQEYLENH 149
>AY331564-1|AAQ76825.1| 390|Homo sapiens GRINL1A combined protein
Gcom10 precursor protein.
Length = 390
Score = 29.5 bits (63), Expect = 6.5
Identities = 13/29 (44%), Positives = 17/29 (58%)
Frame = -3
Query: 105 DYGPRKARIRVRDENLSVGHSQQSEDENH 19
DY + +IR + LSV H+QQ ENH
Sbjct: 121 DYDEMRQKIRQLTQELSVSHAQQEYLENH 149
>AY307930-1|AAQ73824.1| 340|Homo sapiens intestinal mucin MUC3A
precursor protein.
Length = 340
Score = 29.5 bits (63), Expect = 6.5
Identities = 18/64 (28%), Positives = 31/64 (48%)
Frame = +2
Query: 155 VPTTDPRGQETATNLLTTARTSLILPKTTTLMETATNLSTTVHITWTVPKADLTSSLPLS 334
+PT + T + TT +T++ + T T+TN T++ T + P A T S P
Sbjct: 231 LPTGSIHTTTSPTPVFTTLKTAVTSTSSITSSITSTNTVTSMTTTASQPTATNTLSSPTR 290
Query: 335 LVLA 346
+L+
Sbjct: 291 TILS 294
>AY237639-1|AAP75897.1| 438|Homo sapiens GRINL1A upstream protein 2
precursor protein.
Length = 438
Score = 29.5 bits (63), Expect = 6.5
Identities = 13/29 (44%), Positives = 17/29 (58%)
Frame = -3
Query: 105 DYGPRKARIRVRDENLSVGHSQQSEDENH 19
DY + +IR + LSV H+QQ ENH
Sbjct: 121 DYDEMRQKIRQLTQELSVSHAQQEYLENH 149
>AY208913-1|AAP41549.1| 445|Homo sapiens GRINL1A complex protein 2
precursor protein.
Length = 445
Score = 29.5 bits (63), Expect = 6.5
Identities = 13/29 (44%), Positives = 17/29 (58%)
Frame = -3
Query: 105 DYGPRKARIRVRDENLSVGHSQQSEDENH 19
DY + +IR + LSV H+QQ ENH
Sbjct: 121 DYDEMRQKIRQLTQELSVSHAQQEYLENH 149
>AY207459-1|AAP41548.1| 466|Homo sapiens GRINL1A upstream protein 1
precursor protein.
Length = 466
Score = 29.5 bits (63), Expect = 6.5
Identities = 13/29 (44%), Positives = 17/29 (58%)
Frame = -3
Query: 105 DYGPRKARIRVRDENLSVGHSQQSEDENH 19
DY + +IR + LSV H+QQ ENH
Sbjct: 121 DYDEMRQKIRQLTQELSVSHAQQEYLENH 149
>AY207007-1|AAO39707.1| 550|Homo sapiens GRINL1A complex protein 1
Gcom1 precursor protein.
Length = 550
Score = 29.5 bits (63), Expect = 6.5
Identities = 13/29 (44%), Positives = 17/29 (58%)
Frame = -3
Query: 105 DYGPRKARIRVRDENLSVGHSQQSEDENH 19
DY + +IR + LSV H+QQ ENH
Sbjct: 121 DYDEMRQKIRQLTQELSVSHAQQEYLENH 149
>AK055535-1|BAB70944.1| 466|Homo sapiens protein ( Homo sapiens
cDNA FLJ30973 fis, clone HEART2000506, weakly similar to
ENAMELIN. ).
Length = 466
Score = 29.5 bits (63), Expect = 6.5
Identities = 13/29 (44%), Positives = 17/29 (58%)
Frame = -3
Query: 105 DYGPRKARIRVRDENLSVGHSQQSEDENH 19
DY + +IR + LSV H+QQ ENH
Sbjct: 121 DYDEMRQKIRQLTQELSVSHAQQEYLENH 149
>U50078-1|AAD12586.1| 4861|Homo sapiens p532 protein.
Length = 4861
Score = 29.1 bits (62), Expect = 8.6
Identities = 18/59 (30%), Positives = 30/59 (50%)
Frame = +2
Query: 164 TDPRGQETATNLLTTARTSLILPKTTTLMETATNLSTTVHITWTVPKADLTSSLPLSLV 340
+DP Q+ T + T+ S ++ +E T +T V T TVP ++ +PLSL+
Sbjct: 2624 SDP-AQQAQTPVTTSPSASSTTSFMSSSLEDTTTATTPVTDTETVPASESPGVMPLSLL 2681
>AY048121-1|AAK85703.1| 659|Homo sapiens RAS guanyl releasing
protein 4 variant 2 protein.
Length = 659
Score = 29.1 bits (62), Expect = 8.6
Identities = 14/39 (35%), Positives = 22/39 (56%)
Frame = +2
Query: 263 NLSTTVHITWTVPKADLTSSLPLSLVLAVGSKEYLRKLI 379
N+ +H +W +P ADL + L S A G + LR+L+
Sbjct: 83 NMVLAMH-SWVLPSADLAARLLTSYQKATGDTQELRRLL 120
>AY048119-1|AAK85701.1| 673|Homo sapiens RAS guanyl releasing
protein 4 protein.
Length = 673
Score = 29.1 bits (62), Expect = 8.6
Identities = 14/39 (35%), Positives = 22/39 (56%)
Frame = +2
Query: 263 NLSTTVHITWTVPKADLTSSLPLSLVLAVGSKEYLRKLI 379
N+ +H +W +P ADL + L S A G + LR+L+
Sbjct: 83 NMVLAMH-SWVLPSADLAARLLTSYQKATGDTQELRRLL 120
>AJ007509-1|CAA07548.1| 856|Homo sapiens E1B-55kDa-associated protein
protein.
Length = 856
Score = 29.1 bits (62), Expect = 8.6
Identities = 27/90 (30%), Positives = 35/90 (38%), Gaps = 7/90 (7%)
Frame = +1
Query: 70 SNPDPGFSRPVIGQPGYVPISTG-PAYVXXXXXXXXXXXXGYEPIDNRPYIVNPP---KD 237
S P P +S+P Q GY TG P GY P PY PP +
Sbjct: 751 SPPQPSYSQPPYNQGGYSQGYTGPPPPPPPPPAYNYGSYGGYNP---APYTPPPPPTAQT 807
Query: 238 Y-NPNGNGYEPIDN--GAYYVDRPQGRPYF 318
Y P+ N Y+ YY ++ Q PY+
Sbjct: 808 YPQPSYNQYQQYAQQWNQYYQNQGQWPPYY 837
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 74,423,588
Number of Sequences: 237096
Number of extensions: 1830111
Number of successful extensions: 11882
Number of sequences better than 10.0: 25
Number of HSP's better than 10.0 without gapping: 11380
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 11872
length of database: 76,859,062
effective HSP length: 84
effective length of database: 56,942,998
effective search space used: 4327667848
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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