SilkBase IMG001 IMG002 IMG003 IMG005 IMG006 IMG007 IMG008 IMG009 kuwako IMG010 IMG011 IMG012

Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= brS-1109
         (378 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_A4QRB7 Cluster: Predicted protein; n=1; Magnaporthe gri...    35   0.58 
UniRef50_Q3JKW7 Cluster: Putative uncharacterized protein; n=2; ...    33   1.8  
UniRef50_Q7RZ51 Cluster: Predicted protein; n=1; Neurospora cras...    33   2.3  
UniRef50_Q9S570 Cluster: PRF20; n=3; Pseudomonas aeruginosa|Rep:...    32   4.1  
UniRef50_Q9RWP4 Cluster: Putative uncharacterized protein; n=1; ...    32   4.1  
UniRef50_Q01JZ9 Cluster: H0525E10.9 protein; n=7; Oryza sativa|R...    32   4.1  
UniRef50_A0TQR4 Cluster: Putative uncharacterized protein; n=4; ...    31   5.4  
UniRef50_A2Z2L5 Cluster: Putative uncharacterized protein; n=1; ...    31   5.4  
UniRef50_Q4PB69 Cluster: Putative uncharacterized protein; n=1; ...    31   5.4  
UniRef50_Q9P1Y6 Cluster: RING and PHD-finger domain-containing p...    31   5.4  
UniRef50_UPI0000DD7E37 Cluster: PREDICTED: hypothetical protein;...    31   7.1  
UniRef50_Q5U400 Cluster: Zc3hdc1l protein; n=4; Euteleostomi|Rep...    31   7.1  
UniRef50_Q4SCG6 Cluster: Chromosome undetermined SCAF14653, whol...    31   7.1  
UniRef50_A2Z7N8 Cluster: Putative uncharacterized protein; n=1; ...    31   7.1  
UniRef50_Q13370 Cluster: cGMP-inhibited 3',5'-cyclic phosphodies...    31   7.1  
UniRef50_Q9NYP3 Cluster: Protein downstream neighbor of Son; n=2...    31   7.1  
UniRef50_Q70IX6 Cluster: Putative uncharacterized protein; n=1; ...    31   9.4  
UniRef50_A4EI22 Cluster: Putative uncharacterized protein; n=1; ...    31   9.4  
UniRef50_A1GBA2 Cluster: Putative uncharacterized protein; n=1; ...    31   9.4  
UniRef50_A0UMB5 Cluster: Methyl-accepting chemotaxis sensory tra...    31   9.4  
UniRef50_A0LUA1 Cluster: Putative uncharacterized protein precur...    31   9.4  
UniRef50_A0LGM0 Cluster: Radical SAM domain protein; n=1; Syntro...    31   9.4  
UniRef50_Q1JTH7 Cluster: Putative uncharacterized protein precur...    31   9.4  
UniRef50_Q2H561 Cluster: Putative uncharacterized protein; n=1; ...    31   9.4  
UniRef50_A7EU17 Cluster: Putative uncharacterized protein; n=1; ...    31   9.4  

>UniRef50_A4QRB7 Cluster: Predicted protein; n=1; Magnaporthe
           grisea|Rep: Predicted protein - Magnaporthe grisea (Rice
           blast fungus) (Pyricularia grisea)
          Length = 237

 Score = 34.7 bits (76), Expect = 0.58
 Identities = 25/68 (36%), Positives = 29/68 (42%), Gaps = 2/68 (2%)
 Frame = -3

Query: 373 PHNTPEALPARGTRP--NAPKHPRLSSQAERLIPARTALCPCISIGESRLRSRCRLIFQP 200
           P  TP   PA  TR   +AP  PR  S   R  P  T     ++ G   L S C+ I  P
Sbjct: 30  PSQTPRQQPATSTRRGVSAPSRPRCGSSPSRPGPFATFAICMMTTGTITLLSACKYI-PP 88

Query: 199 DSWPQTSS 176
            S P  SS
Sbjct: 89  TSPPDASS 96


>UniRef50_Q3JKW7 Cluster: Putative uncharacterized protein; n=2;
            Burkholderia|Rep: Putative uncharacterized protein -
            Burkholderia pseudomallei (strain 1710b)
          Length = 1788

 Score = 33.1 bits (72), Expect = 1.8
 Identities = 16/35 (45%), Positives = 19/35 (54%)
 Frame = +3

Query: 264  RAVRAGISRSACELRRGCFGAFGRVPRAGSASGVL 368
            RA    ++R  C    GC G  GRVPR G+A G L
Sbjct: 1690 RAAEHAVTRLGCVRCIGCVGQRGRVPRIGAARGRL 1724


>UniRef50_Q7RZ51 Cluster: Predicted protein; n=1; Neurospora
           crassa|Rep: Predicted protein - Neurospora crassa
          Length = 1023

 Score = 32.7 bits (71), Expect = 2.3
 Identities = 15/40 (37%), Positives = 20/40 (50%)
 Frame = -3

Query: 376 APHNTPEALPARGTRPNAPKHPRLSSQAERLIPARTALCP 257
           +PH+ P+A P R T P AP  P         +P+ TA  P
Sbjct: 26  SPHHEPQAPPTRPTAPAAPDTPPQPDAPRIPLPSSTAAAP 65


>UniRef50_Q9S570 Cluster: PRF20; n=3; Pseudomonas aeruginosa|Rep:
           PRF20 - Pseudomonas aeruginosa
          Length = 745

 Score = 31.9 bits (69), Expect = 4.1
 Identities = 15/36 (41%), Positives = 20/36 (55%)
 Frame = -1

Query: 204 SQIVGLRRPASEKPNRSPKRTKGKRGTCKLTSFKSL 97
           S +   RRPA  K  ++P+R +GK G  K  S  SL
Sbjct: 523 STLESARRPAQRKRGQTPRRKRGKGGGLKARSLPSL 558


>UniRef50_Q9RWP4 Cluster: Putative uncharacterized protein; n=1;
           Deinococcus radiodurans|Rep: Putative uncharacterized
           protein - Deinococcus radiodurans
          Length = 164

 Score = 31.9 bits (69), Expect = 4.1
 Identities = 23/63 (36%), Positives = 30/63 (47%)
 Frame = -3

Query: 373 PHNTPEALPARGTRPNAPKHPRLSSQAERLIPARTALCPCISIGESRLRSRCRLIFQPDS 194
           P  TP ALPA G RP A      ++QA+   P +  L P +  G+  +R R    F P  
Sbjct: 102 PGVTPRALPASGPRPAA-----TATQAQTAAPLKLQLMP-VWTGQFMVRPRELAPFNPLG 155

Query: 193 WPQ 185
            PQ
Sbjct: 156 LPQ 158


>UniRef50_Q01JZ9 Cluster: H0525E10.9 protein; n=7; Oryza sativa|Rep:
           H0525E10.9 protein - Oryza sativa (Rice)
          Length = 986

 Score = 31.9 bits (69), Expect = 4.1
 Identities = 18/51 (35%), Positives = 26/51 (50%)
 Frame = -2

Query: 362 PRGAPGTRHPPERTKAPAS*LASRTADTSPHRSLSLYIDRRVASALSLPAN 210
           PR  PGT  P      PA+  ASRTA  +   + +  + RR A+A +  A+
Sbjct: 105 PRKPPGTTAPVAARNIPATTAASRTATRATTTTTATSVSRRPAAAAAAVAS 155


>UniRef50_A0TQR4 Cluster: Putative uncharacterized protein; n=4;
           Burkholderia|Rep: Putative uncharacterized protein -
           Burkholderia cenocepacia MC0-3
          Length = 509

 Score = 31.5 bits (68), Expect = 5.4
 Identities = 17/40 (42%), Positives = 19/40 (47%), Gaps = 1/40 (2%)
 Frame = -3

Query: 277 ARTALCPCISIGESRLRSRCRLIFQPDS-WPQTSSIRKAK 161
           A  A  PC   G+ RLR R R   QPD   P    IR A+
Sbjct: 254 AAVAAAPCAERGQQRLRDRMRRTAQPDRILPAAHGIRNAR 293


>UniRef50_A2Z2L5 Cluster: Putative uncharacterized protein; n=1;
           Oryza sativa (indica cultivar-group)|Rep: Putative
           uncharacterized protein - Oryza sativa subsp. indica
           (Rice)
          Length = 206

 Score = 31.5 bits (68), Expect = 5.4
 Identities = 15/45 (33%), Positives = 23/45 (51%)
 Frame = +3

Query: 210 ISRQRERRRDSPIDIQGQRAVRAGISRSACELRRGCFGAFGRVPR 344
           I R   +  + P D +G    + G++R + E+  GC GA GR  R
Sbjct: 121 IPRMFHQEAEEPTDDEGAAGKKQGMARDSDEVSPGCRGADGRCSR 165


>UniRef50_Q4PB69 Cluster: Putative uncharacterized protein; n=1;
           Ustilago maydis|Rep: Putative uncharacterized protein -
           Ustilago maydis (Smut fungus)
          Length = 363

 Score = 31.5 bits (68), Expect = 5.4
 Identities = 19/69 (27%), Positives = 36/69 (52%), Gaps = 1/69 (1%)
 Frame = -2

Query: 341 RHPPERTKAPAS*LASRTADTSPHRSL-SLYIDRRVASALSLPANFSAR*LASDVQHQKS 165
           R   +R+ +P+S  +S  A +SP++ L S  +D   +S LS     +    A +V+H+K 
Sbjct: 48  REQQQRSASPSSSASSAPASSSPNKRLKSDQVDSSTSSGLSPGIKAALDSAAGEVEHEKF 107

Query: 164 QIDHQKEPR 138
            + + +  R
Sbjct: 108 NVSNDEAVR 116


>UniRef50_Q9P1Y6 Cluster: RING and PHD-finger domain-containing
           protein KIAA1542; n=21; Eutheria|Rep: RING and
           PHD-finger domain-containing protein KIAA1542 - Homo
           sapiens (Human)
          Length = 1649

 Score = 31.5 bits (68), Expect = 5.4
 Identities = 16/39 (41%), Positives = 18/39 (46%)
 Frame = -3

Query: 373 PHNTPEALPARGTRPNAPKHPRLSSQAERLIPARTALCP 257
           P   P   PA+G   N P+   LS Q     PARTA  P
Sbjct: 561 PRALPSGSPAQGPSGNRPQSTGLSCQGRSRTPARTAGAP 599


>UniRef50_UPI0000DD7E37 Cluster: PREDICTED: hypothetical protein;
           n=2; Homo sapiens|Rep: PREDICTED: hypothetical protein -
           Homo sapiens
          Length = 375

 Score = 31.1 bits (67), Expect = 7.1
 Identities = 19/50 (38%), Positives = 25/50 (50%), Gaps = 1/50 (2%)
 Frame = -2

Query: 356 GAPGTRHPPERTKAP-AS*LASRTADTSPHRSLSLYIDRRVASALSLPAN 210
           G PGT    +R + P AS L  R+AD  P   L LY+     + L  P+N
Sbjct: 284 GRPGTAGARQRRRRPGASELKRRSADVHPAGRLPLYLACSPTTTLGPPSN 333


>UniRef50_Q5U400 Cluster: Zc3hdc1l protein; n=4; Euteleostomi|Rep:
           Zc3hdc1l protein - Danio rerio (Zebrafish) (Brachydanio
           rerio)
          Length = 784

 Score = 31.1 bits (67), Expect = 7.1
 Identities = 16/49 (32%), Positives = 21/49 (42%)
 Frame = -1

Query: 282 YQPAPLSVLVYRSASRVCALVAG*FFSQIVGLRRPASEKPNRSPKRTKG 136
           Y+P PL  L  R        +    +S I  LRR    KPN +P   +G
Sbjct: 187 YEPHPLKTLQDRGVPTELMALMKDLYSNIEALRRTNRNKPNTAPNNRRG 235


>UniRef50_Q4SCG6 Cluster: Chromosome undetermined SCAF14653, whole
           genome shotgun sequence; n=2; Tetraodontidae|Rep:
           Chromosome undetermined SCAF14653, whole genome shotgun
           sequence - Tetraodon nigroviridis (Green puffer)
          Length = 2351

 Score = 31.1 bits (67), Expect = 7.1
 Identities = 13/35 (37%), Positives = 17/35 (48%)
 Frame = +2

Query: 269 GAGWYQPFGLRAKTRVLWCVRAGAACRERLGGVMR 373
           G GW  P        +  CV+AGA CR  L G+ +
Sbjct: 3   GLGWGSPVSKVTVASLAECVKAGALCRSGLSGLQK 37


>UniRef50_A2Z7N8 Cluster: Putative uncharacterized protein; n=1;
           Oryza sativa (indica cultivar-group)|Rep: Putative
           uncharacterized protein - Oryza sativa subsp. indica
           (Rice)
          Length = 146

 Score = 31.1 bits (67), Expect = 7.1
 Identities = 12/18 (66%), Positives = 12/18 (66%)
 Frame = -3

Query: 361 PEALPARGTRPNAPKHPR 308
           P  LP R  RP APKHPR
Sbjct: 118 PTRLPLRARRPGAPKHPR 135


>UniRef50_Q13370 Cluster: cGMP-inhibited 3',5'-cyclic
           phosphodiesterase B; n=26; Euteleostomi|Rep:
           cGMP-inhibited 3',5'-cyclic phosphodiesterase B - Homo
           sapiens (Human)
          Length = 1112

 Score = 31.1 bits (67), Expect = 7.1
 Identities = 17/46 (36%), Positives = 24/46 (52%), Gaps = 4/46 (8%)
 Frame = -3

Query: 325 APKHPRLSSQAERLIPA--RTALCPCISIGESRLR--SRCRLIFQP 200
           AP HPRLSS AE  +P         C+S+GE+       C++  +P
Sbjct: 272 APLHPRLSSAAEEKVPVIRPRRRSSCVSLGETAASYYGSCKIFRRP 317


>UniRef50_Q9NYP3 Cluster: Protein downstream neighbor of Son; n=27;
           Tetrapoda|Rep: Protein downstream neighbor of Son - Homo
           sapiens (Human)
          Length = 566

 Score = 31.1 bits (67), Expect = 7.1
 Identities = 19/49 (38%), Positives = 22/49 (44%)
 Frame = -2

Query: 362 PRGAPGTRHPPERTKAPAS*LASRTADTSPHRSLSLYIDRRVASALSLP 216
           P  +PG R PPE  +       SR A  SP R L+    RR A    LP
Sbjct: 6   PGYSPGFRKPPEVVRLRRKRARSRGAAASPPRELTEPAARRAALVAGLP 54


>UniRef50_Q70IX6 Cluster: Putative uncharacterized protein; n=1;
           Streptomyces tenebrarius|Rep: Putative uncharacterized
           protein - Streptomyces sp. (strain ATCC 17920 / DSM
           40477 / NCIB 11028)(Streptomyces tenebrarius)
          Length = 311

 Score = 30.7 bits (66), Expect = 9.4
 Identities = 18/32 (56%), Positives = 18/32 (56%), Gaps = 1/32 (3%)
 Frame = -2

Query: 365 HPRGAPGTRHPPE-RTKAPAS*LASRTADTSP 273
           HPR APG   PP  RT AP S     T DTSP
Sbjct: 259 HPRHAPGVPQPPSGRTPAPPS-----TRDTSP 285


>UniRef50_A4EI22 Cluster: Putative uncharacterized protein; n=1;
           Roseobacter sp. CCS2|Rep: Putative uncharacterized
           protein - Roseobacter sp. CCS2
          Length = 147

 Score = 30.7 bits (66), Expect = 9.4
 Identities = 17/49 (34%), Positives = 26/49 (53%), Gaps = 3/49 (6%)
 Frame = -3

Query: 361 PEALPARGTRPNAPKHP---RLSSQAERLIPARTALCPCISIGESRLRS 224
           PEA  A   +PN P+ P   + + Q ER+  AR  L P   +  ++L+S
Sbjct: 45  PEAAAAPPVKPNKPRPPGWAQRAGQLERIAEARRLLSPKSKVALAKLKS 93


>UniRef50_A1GBA2 Cluster: Putative uncharacterized protein; n=1;
           Salinispora arenicola CNS205|Rep: Putative
           uncharacterized protein - Salinispora arenicola CNS205
          Length = 169

 Score = 30.7 bits (66), Expect = 9.4
 Identities = 13/29 (44%), Positives = 18/29 (62%), Gaps = 1/29 (3%)
 Frame = +2

Query: 272 AGWYQPFGLRAKTRVLWCVRAGAA-CRER 355
           AGW++  G+R     + C+R GAA CR R
Sbjct: 136 AGWFEGIGVRVSDETVECMREGAAVCRFR 164


>UniRef50_A0UMB5 Cluster: Methyl-accepting chemotaxis sensory
           transducer; n=1; Burkholderia multivorans ATCC
           17616|Rep: Methyl-accepting chemotaxis sensory
           transducer - Burkholderia multivorans ATCC 17616
          Length = 617

 Score = 30.7 bits (66), Expect = 9.4
 Identities = 19/48 (39%), Positives = 24/48 (50%)
 Frame = +3

Query: 228 RRRDSPIDIQGQRAVRAGISRSACELRRGCFGAFGRVPRAGSASGVLC 371
           RRR  P   +  R V A +SR+A   RRG   A  R   AG+A  + C
Sbjct: 102 RRRAQPRHARTVRCVVAEVSRAAARARRGPARAGRRSEAAGAAGQLRC 149


>UniRef50_A0LUA1 Cluster: Putative uncharacterized protein
           precursor; n=1; Acidothermus cellulolyticus 11B|Rep:
           Putative uncharacterized protein precursor -
           Acidothermus cellulolyticus (strain ATCC 43068 / 11B)
          Length = 238

 Score = 30.7 bits (66), Expect = 9.4
 Identities = 21/63 (33%), Positives = 32/63 (50%), Gaps = 1/63 (1%)
 Frame = -1

Query: 270 PLSVLVYRSASRVCALVAG*FFSQIVGLRRPASEKPNRSPKRTKGKRGTCK-LTSFKSLC 94
           P S+ V  +A  V  +  G    +I+G+RRPA   P RS +   G RG  + +  + +LC
Sbjct: 8   PFSLAVLIAAFLVGVVARGLVQERILGVRRPALRSPGRS-RLGSGARGIRRFIDPYGALC 66

Query: 93  TKL 85
             L
Sbjct: 67  AVL 69


>UniRef50_A0LGM0 Cluster: Radical SAM domain protein; n=1;
           Syntrophobacter fumaroxidans MPOB|Rep: Radical SAM
           domain protein - Syntrophobacter fumaroxidans (strain
           DSM 10017 / MPOB)
          Length = 359

 Score = 30.7 bits (66), Expect = 9.4
 Identities = 25/57 (43%), Positives = 28/57 (49%)
 Frame = +2

Query: 182 RLRPTIWLKN*PATRAQTRLADRYTRTESGAGWYQPFGLRAKTRVLWCVRAGAACRE 352
           RL PT+ LK+       T LAD Y      AG Y+P  L    R  WC RA AA RE
Sbjct: 207 RLYPTLVLKD-------TTLADWYR-----AGSYRPLSLEEAVR--WCARAYAALRE 249


>UniRef50_Q1JTH7 Cluster: Putative uncharacterized protein
           precursor; n=2; cellular organisms|Rep: Putative
           uncharacterized protein precursor - Toxoplasma gondii RH
          Length = 1404

 Score = 30.7 bits (66), Expect = 9.4
 Identities = 14/31 (45%), Positives = 18/31 (58%)
 Frame = +3

Query: 228 RRRDSPIDIQGQRAVRAGISRSACELRRGCF 320
           R R+SP+ +Q  R   AG+ R  C LRR  F
Sbjct: 495 RDRESPVCVQQYRKAEAGMRRDFCALRRLLF 525


>UniRef50_Q2H561 Cluster: Putative uncharacterized protein; n=1;
           Chaetomium globosum|Rep: Putative uncharacterized
           protein - Chaetomium globosum (Soil fungus)
          Length = 1163

 Score = 30.7 bits (66), Expect = 9.4
 Identities = 17/43 (39%), Positives = 21/43 (48%)
 Frame = -3

Query: 376 APHNTPEALPARGTRPNAPKHPRLSSQAERLIPARTALCPCIS 248
           AP     A PA  T  +AP  P+   + ERLI A  +  P IS
Sbjct: 415 APAPPSSAPPASATPASAPPKPKTWGEKERLISAENSRAPQIS 457


>UniRef50_A7EU17 Cluster: Putative uncharacterized protein; n=1;
            Sclerotinia sclerotiorum 1980|Rep: Putative
            uncharacterized protein - Sclerotinia sclerotiorum 1980
          Length = 1402

 Score = 30.7 bits (66), Expect = 9.4
 Identities = 17/54 (31%), Positives = 25/54 (46%), Gaps = 2/54 (3%)
 Frame = -3

Query: 349  PARGTRPNAPKHPRLSSQAERLIPARTALCPCISIGES--RLRSRCRLIFQPDS 194
            P R  RP  PK   +   +   +PA+  L P  +  E   RL+ R R++   DS
Sbjct: 1300 PIRSRRPMMPKEQPIPRSSPARVPAQQLLLPAPTGDEEIRRLKERARVVMAADS 1353


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 397,504,228
Number of Sequences: 1657284
Number of extensions: 7848633
Number of successful extensions: 26205
Number of sequences better than 10.0: 25
Number of HSP's better than 10.0 without gapping: 25323
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 26187
length of database: 575,637,011
effective HSP length: 91
effective length of database: 424,824,167
effective search space used: 14444021678
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)

- SilkBase 1999-2023 -