Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= brS-1109
         (378 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM422833-1|CAM12801.1| 2139|Anopheles gambiae voltage-gated sodi...    24   1.6  
AY345586-1|AAR09143.1|  427|Anopheles gambiae myosuppressin rece...    23   2.8  
AF004916-1|AAB94672.1|  686|Anopheles gambiae pro-phenol oxidase...    23   2.8  
U43499-1|AAA93302.1|  278|Anopheles gambiae a-emp protein.             23   3.7  
AY753542-1|AAV28545.1| 3361|Anopheles gambiae SGS5 protein.            23   4.9  
AF004915-1|AAB94671.1|  688|Anopheles gambiae pro-phenol oxidase...    23   4.9  
AJ271193-1|CAB66001.1| 1623|Anopheles gambiae laminin gamma 1 pr...    22   6.5  
AB090812-2|BAC57900.1| 1173|Anopheles gambiae reverse transcript...    22   8.6  

>AM422833-1|CAM12801.1| 2139|Anopheles gambiae voltage-gated sodium
            channel alpha subunitprotein.
          Length = 2139

 Score = 24.2 bits (50), Expect = 1.6
 Identities = 12/29 (41%), Positives = 17/29 (58%), Gaps = 2/29 (6%)
 Frame = -3

Query: 310  RLSSQAERLIPARTALCPCISI--GESRL 230
            +L+SQ   + P    +CPCIS   GE+ L
Sbjct: 1078 KLTSQIASVQPTGKGVCPCISSEHGENEL 1106


>AY345586-1|AAR09143.1|  427|Anopheles gambiae myosuppressin
           receptor protein.
          Length = 427

 Score = 23.4 bits (48), Expect = 2.8
 Identities = 8/15 (53%), Positives = 12/15 (80%)
 Frame = +3

Query: 126 YLVCPWFFLVIYLAF 170
           Y+VCP+  + IYL+F
Sbjct: 183 YVVCPFLAVPIYLSF 197


>AF004916-1|AAB94672.1|  686|Anopheles gambiae pro-phenol oxidase
           subunit 2 protein.
          Length = 686

 Score = 23.4 bits (48), Expect = 2.8
 Identities = 17/55 (30%), Positives = 21/55 (38%), Gaps = 1/55 (1%)
 Frame = -3

Query: 361 PEALPARGTRP-NAPKHPRLSSQAERLIPARTALCPCISIGESRLRSRCRLIFQP 200
           PE       RP  A    R  + A+  IP R    P IS  E+  R     +F P
Sbjct: 32  PENFLTERYRPIGASLQSRFGNDADTRIPVRNVSPPAISFAEAVPRRGGFSLFNP 86


>U43499-1|AAA93302.1|  278|Anopheles gambiae a-emp protein.
          Length = 278

 Score = 23.0 bits (47), Expect = 3.7
 Identities = 11/35 (31%), Positives = 17/35 (48%)
 Frame = +2

Query: 98  KLLNDVSLHVPRLPLVLFGDLFGFSDAGRLRPTIW 202
           KL  DV     +LP   FG ++G +   +   T+W
Sbjct: 107 KLAKDVFPKEQKLPCEEFGLMYGKNSTSKDTVTVW 141


>AY753542-1|AAV28545.1| 3361|Anopheles gambiae SGS5 protein.
          Length = 3361

 Score = 22.6 bits (46), Expect = 4.9
 Identities = 8/20 (40%), Positives = 14/20 (70%)
 Frame = -3

Query: 337 TRPNAPKHPRLSSQAERLIP 278
           T+P  P +P +S++ + LIP
Sbjct: 374 TKPIVPANPVISTEQKELIP 393


>AF004915-1|AAB94671.1|  688|Anopheles gambiae pro-phenol oxidase
           subunit 1 protein.
          Length = 688

 Score = 22.6 bits (46), Expect = 4.9
 Identities = 16/53 (30%), Positives = 21/53 (39%)
 Frame = -3

Query: 358 EALPARGTRPNAPKHPRLSSQAERLIPARTALCPCISIGESRLRSRCRLIFQP 200
           E L  R     A    R S+ AE+ IP R+   P +S      R     +F P
Sbjct: 34  EFLTDRYRAIGADLQSRFSNDAEQRIPVRSVPMPDLSFANGIDRRGAFSLFAP 86


>AJ271193-1|CAB66001.1| 1623|Anopheles gambiae laminin gamma 1
           precursor protein.
          Length = 1623

 Score = 22.2 bits (45), Expect = 6.5
 Identities = 13/57 (22%), Positives = 21/57 (36%)
 Frame = -3

Query: 346 ARGTRPNAPKHPRLSSQAERLIPARTALCPCISIGESRLRSRCRLIFQPDSWPQTSS 176
           A G R     H    + +  L   RT +C C+   +     RC   +    W + +S
Sbjct: 277 AVGARCKCNGHASECTTSTALDGQRTRVCKCMHFTDGPDCDRCLPFYNDAPWGRATS 333


>AB090812-2|BAC57900.1| 1173|Anopheles gambiae reverse transcriptase
           protein.
          Length = 1173

 Score = 21.8 bits (44), Expect = 8.6
 Identities = 9/30 (30%), Positives = 15/30 (50%)
 Frame = -1

Query: 168 KPNRSPKRTKGKRGTCKLTSFKSLCTKLIL 79
           KP ++P  +   R  C L +   +  +LIL
Sbjct: 501 KPGKAPGESSSYRPLCMLDALGKVLERLIL 530


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 416,419
Number of Sequences: 2352
Number of extensions: 7525
Number of successful extensions: 18
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 18
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 18
length of database: 563,979
effective HSP length: 58
effective length of database: 427,563
effective search space used: 28646721
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)