Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= brS-1107
         (569 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory recept...    25   0.34 
AY531876-2|AAT08871.1|  340|Tribolium castaneum tyrosine recombi...    25   0.60 
AF264720-1|AAF75272.1|  126|Tribolium castaneum putative cytochr...    24   1.0  
AF263514-1|AAF74206.1|  127|Tribolium castaneum cytochrome P450 ...    23   1.4  
AM292374-1|CAL23186.2|  659|Tribolium castaneum gustatory recept...    22   3.2  
AY362543-1|AAQ63455.1|  677|Tribolium castaneum chitin synthase ...    21   7.4  
AY295879-1|AAQ62692.1| 1464|Tribolium castaneum chitin synthase ...    21   7.4  
AY291477-1|AAQ55061.1| 1464|Tribolium castaneum chitin synthase ...    21   7.4  

>AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory receptor
           candidate 19 protein.
          Length = 355

 Score = 25.4 bits (53), Expect = 0.34
 Identities = 9/25 (36%), Positives = 16/25 (64%)
 Frame = -2

Query: 442 FLLFVIHLYLHAIL*VL*RLQYIYH 368
           F++F IHL  + +L +L  + Y Y+
Sbjct: 219 FIIFTIHLLFYCVLIILLCIYYFYY 243


>AY531876-2|AAT08871.1|  340|Tribolium castaneum tyrosine
           recombinase protein.
          Length = 340

 Score = 24.6 bits (51), Expect = 0.60
 Identities = 19/71 (26%), Positives = 35/71 (49%), Gaps = 2/71 (2%)
 Frame = +1

Query: 301 EILHKKTGHRETINADHRLKNLHDRYIEASIRLKELHEDKDG--LRKEEISALSGPHEFQ 474
           E++ +K      +   HR++ L      A+IR+  +    +G  +R  ++   SGPH+FQ
Sbjct: 159 ELITRKLATLMALVTAHRVQTL------AAIRINNILFSAEGVEIRIPDVIKTSGPHKFQ 212

Query: 475 EFYSRLKQIKE 507
               RL + K+
Sbjct: 213 PLL-RLPKFKK 222


>AF264720-1|AAF75272.1|  126|Tribolium castaneum putative cytochrome
           P450 monooxigenaseCYP4Q1 protein.
          Length = 126

 Score = 23.8 bits (49), Expect = 1.0
 Identities = 11/28 (39%), Positives = 16/28 (57%)
 Frame = +2

Query: 473 RSSIRDLSKLKSFIENIQMKYLYPCLSE 556
           R  + DLSK  S+ +   +KYL  C+ E
Sbjct: 27  REVLGDLSKKPSYNDLQNLKYLERCIKE 54


>AF263514-1|AAF74206.1|  127|Tribolium castaneum cytochrome P450
           monooxygenase protein.
          Length = 127

 Score = 23.4 bits (48), Expect = 1.4
 Identities = 9/23 (39%), Positives = 14/23 (60%)
 Frame = +2

Query: 488 DLSKLKSFIENIQMKYLYPCLSE 556
           D  +  +F + ++MKYL  CL E
Sbjct: 32  DSDRPATFADTLEMKYLERCLME 54


>AM292374-1|CAL23186.2|  659|Tribolium castaneum gustatory receptor
           candidate 53 protein.
          Length = 659

 Score = 22.2 bits (45), Expect = 3.2
 Identities = 8/13 (61%), Positives = 9/13 (69%)
 Frame = +1

Query: 109 FVCYHIFSHII*T 147
           F  YHIF HI+ T
Sbjct: 56  FAIYHIFMHIVPT 68


>AY362543-1|AAQ63455.1|  677|Tribolium castaneum chitin synthase
           protein.
          Length = 677

 Score = 21.0 bits (42), Expect = 7.4
 Identities = 6/23 (26%), Positives = 13/23 (56%)
 Frame = -3

Query: 342 IYSLPMPSFFVKNFFDHCVPWFF 274
           ++ +P P  F+++F  H   W +
Sbjct: 199 LFFVPPPLMFLQDFLSHQHAWIW 221


>AY295879-1|AAQ62692.1| 1464|Tribolium castaneum chitin synthase
           protein.
          Length = 1464

 Score = 21.0 bits (42), Expect = 7.4
 Identities = 6/23 (26%), Positives = 13/23 (56%)
 Frame = -3

Query: 342 IYSLPMPSFFVKNFFDHCVPWFF 274
           ++ +P P  F+++F  H   W +
Sbjct: 432 LFFVPPPLMFLQDFLSHQHAWIW 454


>AY291477-1|AAQ55061.1| 1464|Tribolium castaneum chitin synthase
           CHS2 protein.
          Length = 1464

 Score = 21.0 bits (42), Expect = 7.4
 Identities = 6/23 (26%), Positives = 13/23 (56%)
 Frame = -3

Query: 342 IYSLPMPSFFVKNFFDHCVPWFF 274
           ++ +P P  F+++F  H   W +
Sbjct: 432 LFFVPPPLMFLQDFLSHQHAWIW 454


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 125,624
Number of Sequences: 336
Number of extensions: 2521
Number of successful extensions: 8
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8
length of database: 122,585
effective HSP length: 54
effective length of database: 104,441
effective search space used: 14099535
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)