Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= brS-1107
(569 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY051676-1|AAK93100.1| 503|Drosophila melanogaster LD22754p pro... 105 4e-23
AJ223042-1|CAA11045.1| 503|Drosophila melanogaster noisette pro... 105 4e-23
AE014297-288|AAF51999.1| 503|Drosophila melanogaster CG2925-PA ... 105 4e-23
AE014297-4074|AAF56671.1| 866|Drosophila melanogaster CG5882-PA... 35 0.067
AY118334-1|AAM48363.1| 665|Drosophila melanogaster LD24677p pro... 30 1.9
AE013599-2349|AAM70890.1| 665|Drosophila melanogaster CG5522-PF... 30 1.9
AE013599-2348|AAF57951.1| 665|Drosophila melanogaster CG5522-PD... 30 1.9
AE013599-2347|AAM70889.1| 665|Drosophila melanogaster CG5522-PC... 30 1.9
AE013599-2346|AAM70888.1| 702|Drosophila melanogaster CG5522-PE... 30 1.9
AE013599-2345|AAF57952.1| 702|Drosophila melanogaster CG5522-PB... 30 1.9
AE013599-2344|AAM70887.1| 702|Drosophila melanogaster CG5522-PA... 30 1.9
AF221715-1|AAF34661.1| 5554|Drosophila melanogaster split ends l... 28 7.7
AF188205-1|AAF13218.1| 5533|Drosophila melanogaster Spen RNP mot... 28 7.7
AF184612-1|AAF26299.1| 5476|Drosophila melanogaster split ends p... 28 7.7
AE014134-58|AAN10511.1| 5476|Drosophila melanogaster CG18497-PC,... 28 7.7
AE014134-57|AAF51534.2| 5533|Drosophila melanogaster CG18497-PB,... 28 7.7
AE014134-56|AAF51535.2| 5560|Drosophila melanogaster CG18497-PA,... 28 7.7
>AY051676-1|AAK93100.1| 503|Drosophila melanogaster LD22754p
protein.
Length = 503
Score = 105 bits (252), Expect = 4e-23
Identities = 48/87 (55%), Positives = 68/87 (78%)
Frame = +1
Query: 292 MVKEILHKKTGHRETINADHRLKNLHDRYIEASIRLKELHEDKDGLRKEEISALSGPHEF 471
MV E KK G +E I+++HRLK L + + ++ +L++L+EDKD RK EI+ALSGP+EF
Sbjct: 22 MVDEHATKKPGEKERIHSEHRLKYLMELHHNSTSQLRDLYEDKDNERKAEIAALSGPNEF 81
Query: 472 QEFYSRLKQIKEFHRKHPNEISVPMSV 552
EFY+RLKQIK+F++ HP E+SVP+SV
Sbjct: 82 NEFYARLKQIKQFYKSHPAEVSVPLSV 108
Score = 33.5 bits (73), Expect = 0.21
Identities = 15/30 (50%), Positives = 21/30 (70%)
Frame = +3
Query: 228 METILEQQRSYHEERERTMARNGQRNSSQK 317
MET+LEQQR HEERER + ++++K
Sbjct: 1 METLLEQQRRLHEERERLVKLMVDEHATKK 30
>AJ223042-1|CAA11045.1| 503|Drosophila melanogaster noisette
protein.
Length = 503
Score = 105 bits (252), Expect = 4e-23
Identities = 48/87 (55%), Positives = 68/87 (78%)
Frame = +1
Query: 292 MVKEILHKKTGHRETINADHRLKNLHDRYIEASIRLKELHEDKDGLRKEEISALSGPHEF 471
MV E KK G +E I+++HRLK L + + ++ +L++L+EDKD RK EI+ALSGP+EF
Sbjct: 22 MVDEHATKKPGEKERIHSEHRLKYLMELHHNSTSQLRDLYEDKDNERKAEIAALSGPNEF 81
Query: 472 QEFYSRLKQIKEFHRKHPNEISVPMSV 552
EFY+RLKQIK+F++ HP E+SVP+SV
Sbjct: 82 NEFYARLKQIKQFYKSHPAEVSVPLSV 108
Score = 33.5 bits (73), Expect = 0.21
Identities = 15/30 (50%), Positives = 21/30 (70%)
Frame = +3
Query: 228 METILEQQRSYHEERERTMARNGQRNSSQK 317
MET+LEQQR HEERER + ++++K
Sbjct: 1 METLLEQQRRLHEERERLVKLMVDEHATKK 30
>AE014297-288|AAF51999.1| 503|Drosophila melanogaster CG2925-PA
protein.
Length = 503
Score = 105 bits (252), Expect = 4e-23
Identities = 48/87 (55%), Positives = 68/87 (78%)
Frame = +1
Query: 292 MVKEILHKKTGHRETINADHRLKNLHDRYIEASIRLKELHEDKDGLRKEEISALSGPHEF 471
MV E KK G +E I+++HRLK L + + ++ +L++L+EDKD RK EI+ALSGP+EF
Sbjct: 22 MVDEHATKKPGEKERIHSEHRLKYLMELHHNSTSQLRDLYEDKDNERKAEIAALSGPNEF 81
Query: 472 QEFYSRLKQIKEFHRKHPNEISVPMSV 552
EFY+RLKQIK+F++ HP E+SVP+SV
Sbjct: 82 NEFYARLKQIKQFYKSHPAEVSVPLSV 108
Score = 33.5 bits (73), Expect = 0.21
Identities = 15/30 (50%), Positives = 21/30 (70%)
Frame = +3
Query: 228 METILEQQRSYHEERERTMARNGQRNSSQK 317
MET+LEQQR HEERER + ++++K
Sbjct: 1 METLLEQQRRLHEERERLVKLMVDEHATKK 30
>AE014297-4074|AAF56671.1| 866|Drosophila melanogaster CG5882-PA
protein.
Length = 866
Score = 35.1 bits (77), Expect = 0.067
Identities = 26/106 (24%), Positives = 47/106 (44%), Gaps = 1/106 (0%)
Frame = +1
Query: 238 F*SNNEATMRKGKEPWHAMVKEILHKKTGHRETINADHRLKNLHDRYIEASIRLKELHED 417
F NNE ++ + E + + + A H ++ L D +LK+L+ED
Sbjct: 371 FEKNNENLTKERDSLRRELQAEHHQLEQSNAQHQEAQHEVRALKDTITTMDTKLKKLNED 430
Query: 418 KDGLRKEEISALSGPHEFQEFYSRLKQIK-EFHRKHPNEISVPMSV 552
+ L+KE+ L E Q + +L ++ E H K EI + ++
Sbjct: 431 ANKLKKEKTKKLD---EIQHWIDKLDALQNEMHLKENYEIELKRTI 473
>AY118334-1|AAM48363.1| 665|Drosophila melanogaster LD24677p
protein.
Length = 665
Score = 30.3 bits (65), Expect = 1.9
Identities = 13/48 (27%), Positives = 29/48 (60%), Gaps = 3/48 (6%)
Frame = +2
Query: 398 LKNCMKIKMDYEKKKYQHCQDHMSSR---SSIRDLSKLKSFIENIQMK 532
+ N +++ +Y++ Y+H Q H +++ +SIR + +L++ E Q K
Sbjct: 347 MNNILRVISNYQQSNYKHLQKHEATQKYLTSIRYIEELQNIFEEDQYK 394
>AE013599-2349|AAM70890.1| 665|Drosophila melanogaster CG5522-PF,
isoform F protein.
Length = 665
Score = 30.3 bits (65), Expect = 1.9
Identities = 13/48 (27%), Positives = 29/48 (60%), Gaps = 3/48 (6%)
Frame = +2
Query: 398 LKNCMKIKMDYEKKKYQHCQDHMSSR---SSIRDLSKLKSFIENIQMK 532
+ N +++ +Y++ Y+H Q H +++ +SIR + +L++ E Q K
Sbjct: 347 MNNILRVISNYQQSNYKHLQKHEATQKYLTSIRYIEELQNIFEEDQYK 394
>AE013599-2348|AAF57951.1| 665|Drosophila melanogaster CG5522-PD,
isoform D protein.
Length = 665
Score = 30.3 bits (65), Expect = 1.9
Identities = 13/48 (27%), Positives = 29/48 (60%), Gaps = 3/48 (6%)
Frame = +2
Query: 398 LKNCMKIKMDYEKKKYQHCQDHMSSR---SSIRDLSKLKSFIENIQMK 532
+ N +++ +Y++ Y+H Q H +++ +SIR + +L++ E Q K
Sbjct: 347 MNNILRVISNYQQSNYKHLQKHEATQKYLTSIRYIEELQNIFEEDQYK 394
>AE013599-2347|AAM70889.1| 665|Drosophila melanogaster CG5522-PC,
isoform C protein.
Length = 665
Score = 30.3 bits (65), Expect = 1.9
Identities = 13/48 (27%), Positives = 29/48 (60%), Gaps = 3/48 (6%)
Frame = +2
Query: 398 LKNCMKIKMDYEKKKYQHCQDHMSSR---SSIRDLSKLKSFIENIQMK 532
+ N +++ +Y++ Y+H Q H +++ +SIR + +L++ E Q K
Sbjct: 347 MNNILRVISNYQQSNYKHLQKHEATQKYLTSIRYIEELQNIFEEDQYK 394
>AE013599-2346|AAM70888.1| 702|Drosophila melanogaster CG5522-PE,
isoform E protein.
Length = 702
Score = 30.3 bits (65), Expect = 1.9
Identities = 13/48 (27%), Positives = 29/48 (60%), Gaps = 3/48 (6%)
Frame = +2
Query: 398 LKNCMKIKMDYEKKKYQHCQDHMSSR---SSIRDLSKLKSFIENIQMK 532
+ N +++ +Y++ Y+H Q H +++ +SIR + +L++ E Q K
Sbjct: 347 MNNILRVISNYQQSNYKHLQKHEATQKYLTSIRYIEELQNIFEEDQYK 394
>AE013599-2345|AAF57952.1| 702|Drosophila melanogaster CG5522-PB,
isoform B protein.
Length = 702
Score = 30.3 bits (65), Expect = 1.9
Identities = 13/48 (27%), Positives = 29/48 (60%), Gaps = 3/48 (6%)
Frame = +2
Query: 398 LKNCMKIKMDYEKKKYQHCQDHMSSR---SSIRDLSKLKSFIENIQMK 532
+ N +++ +Y++ Y+H Q H +++ +SIR + +L++ E Q K
Sbjct: 347 MNNILRVISNYQQSNYKHLQKHEATQKYLTSIRYIEELQNIFEEDQYK 394
>AE013599-2344|AAM70887.1| 702|Drosophila melanogaster CG5522-PA,
isoform A protein.
Length = 702
Score = 30.3 bits (65), Expect = 1.9
Identities = 13/48 (27%), Positives = 29/48 (60%), Gaps = 3/48 (6%)
Frame = +2
Query: 398 LKNCMKIKMDYEKKKYQHCQDHMSSR---SSIRDLSKLKSFIENIQMK 532
+ N +++ +Y++ Y+H Q H +++ +SIR + +L++ E Q K
Sbjct: 347 MNNILRVISNYQQSNYKHLQKHEATQKYLTSIRYIEELQNIFEEDQYK 394
>AF221715-1|AAF34661.1| 5554|Drosophila melanogaster split ends long
isoform protein.
Length = 5554
Score = 28.3 bits (60), Expect = 7.7
Identities = 19/53 (35%), Positives = 25/53 (47%), Gaps = 6/53 (11%)
Frame = +1
Query: 298 KEILHKKTGHRETINADHRLKNLHDRYI------EASIRLKELHEDKDGLRKE 438
KEI K +E D+R K L D+ + E R KELH +KD +E
Sbjct: 1997 KEIREKDLREKEQRERDNREKELRDKDLREKEMREKEQREKELHREKDQRERE 2049
>AF188205-1|AAF13218.1| 5533|Drosophila melanogaster Spen RNP motif
protein long isoformprotein.
Length = 5533
Score = 28.3 bits (60), Expect = 7.7
Identities = 19/53 (35%), Positives = 25/53 (47%), Gaps = 6/53 (11%)
Frame = +1
Query: 298 KEILHKKTGHRETINADHRLKNLHDRYI------EASIRLKELHEDKDGLRKE 438
KEI K +E D+R K L D+ + E R KELH +KD +E
Sbjct: 2003 KEIREKDLREKEQRERDNREKELRDKDLREKEMREKEQREKELHREKDQRERE 2055
>AF184612-1|AAF26299.1| 5476|Drosophila melanogaster split ends
protein.
Length = 5476
Score = 28.3 bits (60), Expect = 7.7
Identities = 19/53 (35%), Positives = 25/53 (47%), Gaps = 6/53 (11%)
Frame = +1
Query: 298 KEILHKKTGHRETINADHRLKNLHDRYI------EASIRLKELHEDKDGLRKE 438
KEI K +E D+R K L D+ + E R KELH +KD +E
Sbjct: 1946 KEIREKDLREKEQRERDNREKELRDKDLREKEMREKEQREKELHREKDQRERE 1998
>AE014134-58|AAN10511.1| 5476|Drosophila melanogaster CG18497-PC,
isoform C protein.
Length = 5476
Score = 28.3 bits (60), Expect = 7.7
Identities = 19/53 (35%), Positives = 25/53 (47%), Gaps = 6/53 (11%)
Frame = +1
Query: 298 KEILHKKTGHRETINADHRLKNLHDRYI------EASIRLKELHEDKDGLRKE 438
KEI K +E D+R K L D+ + E R KELH +KD +E
Sbjct: 1946 KEIREKDLREKEQRERDNREKELRDKDLREKEMREKEQREKELHREKDQRERE 1998
>AE014134-57|AAF51534.2| 5533|Drosophila melanogaster CG18497-PB,
isoform B protein.
Length = 5533
Score = 28.3 bits (60), Expect = 7.7
Identities = 19/53 (35%), Positives = 25/53 (47%), Gaps = 6/53 (11%)
Frame = +1
Query: 298 KEILHKKTGHRETINADHRLKNLHDRYI------EASIRLKELHEDKDGLRKE 438
KEI K +E D+R K L D+ + E R KELH +KD +E
Sbjct: 2003 KEIREKDLREKEQRERDNREKELRDKDLREKEMREKEQREKELHREKDQRERE 2055
>AE014134-56|AAF51535.2| 5560|Drosophila melanogaster CG18497-PA,
isoform A protein.
Length = 5560
Score = 28.3 bits (60), Expect = 7.7
Identities = 19/53 (35%), Positives = 25/53 (47%), Gaps = 6/53 (11%)
Frame = +1
Query: 298 KEILHKKTGHRETINADHRLKNLHDRYI------EASIRLKELHEDKDGLRKE 438
KEI K +E D+R K L D+ + E R KELH +KD +E
Sbjct: 2003 KEIREKDLREKEQRERDNREKELRDKDLREKEMREKEQREKELHREKDQRERE 2055
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 22,003,651
Number of Sequences: 53049
Number of extensions: 419780
Number of successful extensions: 1688
Number of sequences better than 10.0: 17
Number of HSP's better than 10.0 without gapping: 1634
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1682
length of database: 24,988,368
effective HSP length: 81
effective length of database: 20,691,399
effective search space used: 2234671092
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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