Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= brS-1107
         (569 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z66524-1|CAA91420.2|  500|Caenorhabditis elegans Hypothetical pr...    89   3e-18
Z68108-15|CAJ58502.1|  582|Caenorhabditis elegans Hypothetical p...    29   3.1  
Z68108-14|CAA92133.3| 2066|Caenorhabditis elegans Hypothetical p...    29   3.1  
Z68108-13|CAF31493.1| 2048|Caenorhabditis elegans Hypothetical p...    29   3.1  
Z68108-12|CAF31492.1| 2101|Caenorhabditis elegans Hypothetical p...    29   3.1  
Z68108-11|CAF31491.1| 2134|Caenorhabditis elegans Hypothetical p...    29   3.1  
Z68108-10|CAF31490.1| 1888|Caenorhabditis elegans Hypothetical p...    29   3.1  
Z68108-9|CAF31489.1| 1927|Caenorhabditis elegans Hypothetical pr...    29   3.1  
Z68108-8|CAF31488.1| 1509|Caenorhabditis elegans Hypothetical pr...    29   3.1  
Z68108-5|CAD44152.2|  725|Caenorhabditis elegans Hypothetical pr...    29   3.1  
AY390537-1|AAQ94949.1|  692|Caenorhabditis elegans SMA-9 class B...    29   3.1  
AY389809-1|AAR28681.1|  909|Caenorhabditis elegans zinc finger t...    29   3.1  
AC006713-4|AAK68404.1|  321|Caenorhabditis elegans Hypothetical ...    29   3.1  
Z98866-21|CAD56612.1|  743|Caenorhabditis elegans Hypothetical p...    28   5.4  
Z98866-20|CAB11567.1|  734|Caenorhabditis elegans Hypothetical p...    28   5.4  
Z81548-1|CAB04464.1| 1217|Caenorhabditis elegans Hypothetical pr...    28   5.4  
Z81458-3|CAB03823.2|  487|Caenorhabditis elegans Hypothetical pr...    27   7.2  
AF251126-1|AAF71273.1|  487|Caenorhabditis elegans UDP-GlcNAc:a-...    27   7.2  
AC024790-1|AAK84609.1|  315|Caenorhabditis elegans Hypothetical ...    27   7.2  
Z81526-6|CAB04263.1| 2144|Caenorhabditis elegans Hypothetical pr...    27   9.5  
U70858-5|AAB09179.2|  294|Caenorhabditis elegans Serpentine rece...    27   9.5  

>Z66524-1|CAA91420.2|  500|Caenorhabditis elegans Hypothetical
           protein T13H5.4 protein.
          Length = 500

 Score = 88.6 bits (210), Expect = 3e-18
 Identities = 37/91 (40%), Positives = 63/91 (69%)
 Frame = +1

Query: 295 VKEILHKKTGHRETINADHRLKNLHDRYIEASIRLKELHEDKDGLRKEEISALSGPHEFQ 474
           VKE + +K  H+  +N++ R+K   DRY   S  L + ++D+DG +  E+ ++SGP+EF 
Sbjct: 23  VKEKIAEKLTHKAKVNSEQRVKTFVDRYYSVSAELAKFYKDEDGSKSMEMDSVSGPNEFA 82

Query: 475 EFYSRLKQIKEFHRKHPNEISVPMSVRI*RV 567
           EFYSRLK IK+ HR++P+E++ P++V   ++
Sbjct: 83  EFYSRLKVIKDAHRRNPDELAEPLTVEFQKI 113


>Z68108-15|CAJ58502.1|  582|Caenorhabditis elegans Hypothetical
           protein T05A10.1k protein.
          Length = 582

 Score = 28.7 bits (61), Expect = 3.1
 Identities = 12/38 (31%), Positives = 22/38 (57%)
 Frame = +3

Query: 204 KQFL*PLKMETILEQQRSYHEERERTMARNGQRNSSQK 317
           +Q L  L+++  L+QQ+  H++R        Q N+SQ+
Sbjct: 316 QQQLQQLQLQQFLQQQQQLHQQRAAAQQAQAQNNASQQ 353


>Z68108-14|CAA92133.3| 2066|Caenorhabditis elegans Hypothetical
           protein T05A10.1a protein.
          Length = 2066

 Score = 28.7 bits (61), Expect = 3.1
 Identities = 12/38 (31%), Positives = 22/38 (57%)
 Frame = +3

Query: 204 KQFL*PLKMETILEQQRSYHEERERTMARNGQRNSSQK 317
           +Q L  L+++  L+QQ+  H++R        Q N+SQ+
Sbjct: 293 QQQLQQLQLQQFLQQQQQLHQQRAAAQQAQAQNNASQQ 330


>Z68108-13|CAF31493.1| 2048|Caenorhabditis elegans Hypothetical
           protein T05A10.1f protein.
          Length = 2048

 Score = 28.7 bits (61), Expect = 3.1
 Identities = 12/38 (31%), Positives = 22/38 (57%)
 Frame = +3

Query: 204 KQFL*PLKMETILEQQRSYHEERERTMARNGQRNSSQK 317
           +Q L  L+++  L+QQ+  H++R        Q N+SQ+
Sbjct: 293 QQQLQQLQLQQFLQQQQQLHQQRAAAQQAQAQNNASQQ 330


>Z68108-12|CAF31492.1| 2101|Caenorhabditis elegans Hypothetical
           protein T05A10.1e protein.
          Length = 2101

 Score = 28.7 bits (61), Expect = 3.1
 Identities = 12/38 (31%), Positives = 22/38 (57%)
 Frame = +3

Query: 204 KQFL*PLKMETILEQQRSYHEERERTMARNGQRNSSQK 317
           +Q L  L+++  L+QQ+  H++R        Q N+SQ+
Sbjct: 293 QQQLQQLQLQQFLQQQQQLHQQRAAAQQAQAQNNASQQ 330


>Z68108-11|CAF31491.1| 2134|Caenorhabditis elegans Hypothetical
           protein T05A10.1d protein.
          Length = 2134

 Score = 28.7 bits (61), Expect = 3.1
 Identities = 12/38 (31%), Positives = 22/38 (57%)
 Frame = +3

Query: 204 KQFL*PLKMETILEQQRSYHEERERTMARNGQRNSSQK 317
           +Q L  L+++  L+QQ+  H++R        Q N+SQ+
Sbjct: 293 QQQLQQLQLQQFLQQQQQLHQQRAAAQQAQAQNNASQQ 330


>Z68108-10|CAF31490.1| 1888|Caenorhabditis elegans Hypothetical
           protein T05A10.1g protein.
          Length = 1888

 Score = 28.7 bits (61), Expect = 3.1
 Identities = 12/38 (31%), Positives = 22/38 (57%)
 Frame = +3

Query: 204 KQFL*PLKMETILEQQRSYHEERERTMARNGQRNSSQK 317
           +Q L  L+++  L+QQ+  H++R        Q N+SQ+
Sbjct: 293 QQQLQQLQLQQFLQQQQQLHQQRAAAQQAQAQNNASQQ 330


>Z68108-9|CAF31489.1| 1927|Caenorhabditis elegans Hypothetical
           protein T05A10.1i protein.
          Length = 1927

 Score = 28.7 bits (61), Expect = 3.1
 Identities = 12/38 (31%), Positives = 22/38 (57%)
 Frame = +3

Query: 204 KQFL*PLKMETILEQQRSYHEERERTMARNGQRNSSQK 317
           +Q L  L+++  L+QQ+  H++R        Q N+SQ+
Sbjct: 293 QQQLQQLQLQQFLQQQQQLHQQRAAAQQAQAQNNASQQ 330


>Z68108-8|CAF31488.1| 1509|Caenorhabditis elegans Hypothetical
           protein T05A10.1j protein.
          Length = 1509

 Score = 28.7 bits (61), Expect = 3.1
 Identities = 12/38 (31%), Positives = 22/38 (57%)
 Frame = +3

Query: 204 KQFL*PLKMETILEQQRSYHEERERTMARNGQRNSSQK 317
           +Q L  L+++  L+QQ+  H++R        Q N+SQ+
Sbjct: 293 QQQLQQLQLQQFLQQQQQLHQQRAAAQQAQAQNNASQQ 330


>Z68108-5|CAD44152.2|  725|Caenorhabditis elegans Hypothetical
           protein T05A10.1b protein.
          Length = 725

 Score = 28.7 bits (61), Expect = 3.1
 Identities = 12/38 (31%), Positives = 22/38 (57%)
 Frame = +3

Query: 204 KQFL*PLKMETILEQQRSYHEERERTMARNGQRNSSQK 317
           +Q L  L+++  L+QQ+  H++R        Q N+SQ+
Sbjct: 316 QQQLQQLQLQQFLQQQQQLHQQRAAAQQAQAQNNASQQ 353


>AY390537-1|AAQ94949.1|  692|Caenorhabditis elegans SMA-9 class B
           protein.
          Length = 692

 Score = 28.7 bits (61), Expect = 3.1
 Identities = 12/38 (31%), Positives = 22/38 (57%)
 Frame = +3

Query: 204 KQFL*PLKMETILEQQRSYHEERERTMARNGQRNSSQK 317
           +Q L  L+++  L+QQ+  H++R        Q N+SQ+
Sbjct: 316 QQQLQQLQLQQFLQQQQQLHQQRAAAQQAQAQNNASQQ 353


>AY389809-1|AAR28681.1|  909|Caenorhabditis elegans zinc finger
           transcription factorSMA-9 protein.
          Length = 909

 Score = 28.7 bits (61), Expect = 3.1
 Identities = 12/38 (31%), Positives = 22/38 (57%)
 Frame = +3

Query: 204 KQFL*PLKMETILEQQRSYHEERERTMARNGQRNSSQK 317
           +Q L  L+++  L+QQ+  H++R        Q N+SQ+
Sbjct: 293 QQQLQQLQLQQFLQQQQQLHQQRAAAQQAQAQNNASQQ 330


>AC006713-4|AAK68404.1|  321|Caenorhabditis elegans Hypothetical
           protein Y119D3A.1 protein.
          Length = 321

 Score = 28.7 bits (61), Expect = 3.1
 Identities = 16/50 (32%), Positives = 27/50 (54%), Gaps = 1/50 (2%)
 Frame = +1

Query: 343 ADHRLKNLHDRYIEASIRL-KELHEDKDGLRKEEISALSGPHEFQEFYSR 489
           A +    L+   +E S +L   L+ED +    EE++  SG  EF++FY +
Sbjct: 109 AKNNATELYFSSLEKSNKLGASLYEDSENAGAEEMNISSGTIEFKDFYHK 158


>Z98866-21|CAD56612.1|  743|Caenorhabditis elegans Hypothetical
           protein Y49E10.23b protein.
          Length = 743

 Score = 27.9 bits (59), Expect = 5.4
 Identities = 16/55 (29%), Positives = 26/55 (47%)
 Frame = +1

Query: 331 ETINADHRLKNLHDRYIEASIRLKELHEDKDGLRKEEISALSGPHEFQEFYSRLK 495
           E  + ++R+K    R    S  L E  +  D LRK+ I A    H  Q++  +L+
Sbjct: 220 ERFDFENRMKIAEKRVESLSSNLSESKQQGDMLRKQLIQAKDDKHIIQQYEVKLQ 274


>Z98866-20|CAB11567.1|  734|Caenorhabditis elegans Hypothetical
           protein Y49E10.23a protein.
          Length = 734

 Score = 27.9 bits (59), Expect = 5.4
 Identities = 16/55 (29%), Positives = 26/55 (47%)
 Frame = +1

Query: 331 ETINADHRLKNLHDRYIEASIRLKELHEDKDGLRKEEISALSGPHEFQEFYSRLK 495
           E  + ++R+K    R    S  L E  +  D LRK+ I A    H  Q++  +L+
Sbjct: 220 ERFDFENRMKIAEKRVESLSSNLSESKQQGDMLRKQLIQAKDDKHIIQQYEVKLQ 274


>Z81548-1|CAB04464.1| 1217|Caenorhabditis elegans Hypothetical protein
            F54F12.1 protein.
          Length = 1217

 Score = 27.9 bits (59), Expect = 5.4
 Identities = 14/51 (27%), Positives = 24/51 (47%)
 Frame = +1

Query: 376  YIEASIRLKELHEDKDGLRKEEISALSGPHEFQEFYSRLKQIKEFHRKHPN 528
            Y    I   + H++ DG   E  + ++      E Y   K+++EF + HPN
Sbjct: 1148 YYHEQILADKYHDNNDGPTAERAANMNDTTVIMEDYCD-KKLEEFKKAHPN 1197


>Z81458-3|CAB03823.2|  487|Caenorhabditis elegans Hypothetical
           protein C03E10.4 protein.
          Length = 487

 Score = 27.5 bits (58), Expect = 7.2
 Identities = 19/70 (27%), Positives = 30/70 (42%)
 Frame = +3

Query: 126 IFSHNLNFKIINHYFNIIVFYKVIDIKQFL*PLKMETILEQQRSYHEERERTMARNGQRN 305
           +FSH++N  IIN     I F +V  I          T+   Q     +    M R+  + 
Sbjct: 157 VFSHDINVGIINEMIRNITFARVYQIFYPYNLQLFPTVFPGQSP--SDCPEKMKRDKAQE 214

Query: 306 SSQKNWASGD 335
           ++  NW+S D
Sbjct: 215 TNCSNWSSPD 224


>AF251126-1|AAF71273.1|  487|Caenorhabditis elegans
           UDP-GlcNAc:a-6-D-mannoside
           b1,2-N-acetylglucosaminyltransferase II protein.
          Length = 487

 Score = 27.5 bits (58), Expect = 7.2
 Identities = 19/70 (27%), Positives = 30/70 (42%)
 Frame = +3

Query: 126 IFSHNLNFKIINHYFNIIVFYKVIDIKQFL*PLKMETILEQQRSYHEERERTMARNGQRN 305
           +FSH++N  IIN     I F +V  I          T+   Q     +    M R+  + 
Sbjct: 157 VFSHDINVGIINEMIRNITFARVYQIFYPYNLQLFPTVFPGQSP--SDCPEKMKRDKAQE 214

Query: 306 SSQKNWASGD 335
           ++  NW+S D
Sbjct: 215 TNCSNWSSPD 224


>AC024790-1|AAK84609.1|  315|Caenorhabditis elegans Hypothetical
           protein Y47D7A.3 protein.
          Length = 315

 Score = 27.5 bits (58), Expect = 7.2
 Identities = 13/33 (39%), Positives = 17/33 (51%)
 Frame = +1

Query: 355 LKNLHDRYIEASIRLKELHEDKDGLRKEEISAL 453
           L N  DRYI+  I +    E +  LR  EIS +
Sbjct: 220 LSNARDRYIQCMINVSSCSEVQSALRLAEISLI 252


>Z81526-6|CAB04263.1| 2144|Caenorhabditis elegans Hypothetical
           protein F33H2.5 protein.
          Length = 2144

 Score = 27.1 bits (57), Expect = 9.5
 Identities = 9/20 (45%), Positives = 14/20 (70%)
 Frame = +3

Query: 105 IFCMLPYIFSHNLNFKIINH 164
           I+C++P  F  N+ FK+ NH
Sbjct: 844 IWCLIPASFPENVTFKLKNH 863


>U70858-5|AAB09179.2|  294|Caenorhabditis elegans Serpentine
           receptor, class x protein34 protein.
          Length = 294

 Score = 27.1 bits (57), Expect = 9.5
 Identities = 14/45 (31%), Positives = 21/45 (46%)
 Frame = +3

Query: 126 IFSHNLNFKIINHYFNIIVFYKVIDIKQFL*PLKMETILEQQRSY 260
           I   N+   I+N   ++I   KVI +KQF    ++      Q SY
Sbjct: 171 ILGKNIILSIVNVILHVITMIKVITLKQFKARTQVSRSYSLQESY 215


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,846,172
Number of Sequences: 27780
Number of extensions: 234250
Number of successful extensions: 829
Number of sequences better than 10.0: 21
Number of HSP's better than 10.0 without gapping: 794
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 829
length of database: 12,740,198
effective HSP length: 77
effective length of database: 10,601,138
effective search space used: 1187327456
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)