Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= brS-1099
         (710 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ999006-1|ABJ99082.1|  282|Anopheles gambiae voltage-dependent ...   283   4e-78
AY137768-1|AAN16031.1|  282|Anopheles gambiae porin protein.          283   4e-78
AY082909-1|AAL89811.1|  282|Anopheles gambiae porin protein.          283   4e-78
AY705402-1|AAU12511.1|  509|Anopheles gambiae nicotinic acetylch...    24   4.1  
AB090813-2|BAC57902.1| 1099|Anopheles gambiae reverse transcript...    23   7.2  
U51225-1|AAA96405.1|  692|Anopheles gambiae hexamerin protein.         23   9.5  
EF588455-1|ABQ96691.1|  177|Anopheles gambiae transposase protein.     23   9.5  
AY705399-1|AAU12508.1|  533|Anopheles gambiae nicotinic acetylch...    23   9.5  
AF020870-1|AAC31873.1|  692|Anopheles gambiae hexamerin A protein.     23   9.5  

>DQ999006-1|ABJ99082.1|  282|Anopheles gambiae voltage-dependent
           anion channel protein.
          Length = 282

 Score =  283 bits (694), Expect = 4e-78
 Identities = 117/209 (55%), Positives = 170/209 (81%)
 Frame = +3

Query: 81  MAPPYYADLGKKANDVFSKGYHFGVFKLDLKTKSESGVEFTSGITSNQESGKVFGSLSSK 260
           MAPP Y+DLGK+A DVF+KGYHFG++KLD+KTK+ SGVEF++   SNQ++GKVFGSL +K
Sbjct: 1   MAPPSYSDLGKQARDVFNKGYHFGLWKLDVKTKTNSGVEFSTSGHSNQDTGKVFGSLETK 60

Query: 261 FAVKDYGLTFTEKWNTDNTLATDITIQDKIAAGLKVTLEGTFAPQTGTKTGKLKTSFTND 440
           + VK+YGL F+EKWNTDNTL +++++++++  GLKV+ +G F P TG+KTG+ KT++++D
Sbjct: 61  YKVKEYGLNFSEKWNTDNTLTSEVSVENQLVKGLKVSFDGMFVPHTGSKTGRFKTAYSHD 120

Query: 441 TVAVNTNLDLDLAGPVVDVAAVLNYQGWLAGVHTQFDTQKAKFSKNNFALGYQSGDFALH 620
            V V+ + ++DL+GP+V+ + V  YQGWLAG    FD+QK+K + NNFALGY +GDF LH
Sbjct: 121 RVRVDADFNVDLSGPLVNASGVAAYQGWLAGYQVAFDSQKSKITANNFALGYSAGDFVLH 180

Query: 621 TNVDNGKDFGGSIYQKVSDKLDCGVSMKW 707
           TNV++G++FGG IYQ+ +D+L+  V + W
Sbjct: 181 TNVNDGREFGGLIYQRCNDRLETAVQLSW 209


>AY137768-1|AAN16031.1|  282|Anopheles gambiae porin protein.
          Length = 282

 Score =  283 bits (694), Expect = 4e-78
 Identities = 117/209 (55%), Positives = 170/209 (81%)
 Frame = +3

Query: 81  MAPPYYADLGKKANDVFSKGYHFGVFKLDLKTKSESGVEFTSGITSNQESGKVFGSLSSK 260
           MAPP Y+DLGK+A DVF+KGYHFG++KLD+KTK+ SGVEF++   SNQ++GKVFGSL +K
Sbjct: 1   MAPPSYSDLGKQARDVFNKGYHFGLWKLDVKTKTNSGVEFSTSGHSNQDTGKVFGSLETK 60

Query: 261 FAVKDYGLTFTEKWNTDNTLATDITIQDKIAAGLKVTLEGTFAPQTGTKTGKLKTSFTND 440
           + VK+YGL F+EKWNTDNTL +++++++++  GLKV+ +G F P TG+KTG+ KT++++D
Sbjct: 61  YKVKEYGLNFSEKWNTDNTLTSEVSVENQLVKGLKVSFDGMFVPHTGSKTGRFKTAYSHD 120

Query: 441 TVAVNTNLDLDLAGPVVDVAAVLNYQGWLAGVHTQFDTQKAKFSKNNFALGYQSGDFALH 620
            V V+ + ++DL+GP+V+ + V  YQGWLAG    FD+QK+K + NNFALGY +GDF LH
Sbjct: 121 RVRVDADFNVDLSGPLVNASGVAAYQGWLAGYQVAFDSQKSKITANNFALGYSAGDFVLH 180

Query: 621 TNVDNGKDFGGSIYQKVSDKLDCGVSMKW 707
           TNV++G++FGG IYQ+ +D+L+  V + W
Sbjct: 181 TNVNDGREFGGLIYQRCNDRLETAVQLSW 209


>AY082909-1|AAL89811.1|  282|Anopheles gambiae porin protein.
          Length = 282

 Score =  283 bits (694), Expect = 4e-78
 Identities = 117/209 (55%), Positives = 170/209 (81%)
 Frame = +3

Query: 81  MAPPYYADLGKKANDVFSKGYHFGVFKLDLKTKSESGVEFTSGITSNQESGKVFGSLSSK 260
           MAPP Y+DLGK+A DVF+KGYHFG++KLD+KTK+ SGVEF++   SNQ++GKVFGSL +K
Sbjct: 1   MAPPSYSDLGKQARDVFNKGYHFGLWKLDVKTKTNSGVEFSTSGHSNQDTGKVFGSLETK 60

Query: 261 FAVKDYGLTFTEKWNTDNTLATDITIQDKIAAGLKVTLEGTFAPQTGTKTGKLKTSFTND 440
           + VK+YGL F+EKWNTDNTL +++++++++  GLKV+ +G F P TG+KTG+ KT++++D
Sbjct: 61  YKVKEYGLNFSEKWNTDNTLTSEVSVENQLVKGLKVSFDGMFVPHTGSKTGRFKTAYSHD 120

Query: 441 TVAVNTNLDLDLAGPVVDVAAVLNYQGWLAGVHTQFDTQKAKFSKNNFALGYQSGDFALH 620
            V V+ + ++DL+GP+V+ + V  YQGWLAG    FD+QK+K + NNFALGY +GDF LH
Sbjct: 121 RVRVDADFNVDLSGPLVNASGVAAYQGWLAGYQVAFDSQKSKITANNFALGYSAGDFVLH 180

Query: 621 TNVDNGKDFGGSIYQKVSDKLDCGVSMKW 707
           TNV++G++FGG IYQ+ +D+L+  V + W
Sbjct: 181 TNVNDGREFGGLIYQRCNDRLETAVQLSW 209


>AY705402-1|AAU12511.1|  509|Anopheles gambiae nicotinic
           acetylcholine receptor subunitalpha 7 protein.
          Length = 509

 Score = 24.2 bits (50), Expect = 4.1
 Identities = 10/23 (43%), Positives = 17/23 (73%)
 Frame = +3

Query: 156 FKLDLKTKSESGVEFTSGITSNQ 224
           F+LDL+ + ESG + +S IT+ +
Sbjct: 157 FQLDLQLQDESGGDISSFITNGE 179


>AB090813-2|BAC57902.1| 1099|Anopheles gambiae reverse transcriptase
           protein.
          Length = 1099

 Score = 23.4 bits (48), Expect = 7.2
 Identities = 14/45 (31%), Positives = 25/45 (55%)
 Frame = +1

Query: 79  TWLPHIMLTLERRPMMSSARAITLVFSNST*RPRASLVLNSPAES 213
           +WLPH+    ER   ++ A +  L+ ++S  R   + +L S +ES
Sbjct: 742 SWLPHVKEVTERAGKIADATS-RLLRNHSEPRASKAKLLASVSES 785


>U51225-1|AAA96405.1|  692|Anopheles gambiae hexamerin protein.
          Length = 692

 Score = 23.0 bits (47), Expect = 9.5
 Identities = 13/48 (27%), Positives = 22/48 (45%)
 Frame = +3

Query: 516 QGWLAGVHTQFDTQKAKFSKNNFALGYQSGDFALHTNVDNGKDFGGSI 659
           +GW +G+  QF      ++   +  GYQ  D      V++G  F  S+
Sbjct: 607 KGWTSGMPMQFYFIITPYTAKTYEQGYQY-DKTFTCGVESGMRFYDSL 653


>EF588455-1|ABQ96691.1|  177|Anopheles gambiae transposase protein.
          Length = 177

 Score = 23.0 bits (47), Expect = 9.5
 Identities = 10/23 (43%), Positives = 12/23 (52%)
 Frame = -1

Query: 587 SKVVLGELCFLCIKLGVYTSQPT 519
           S V  G  CF C+K+  YT   T
Sbjct: 17  SPVETGAKCFYCLKVFKYTKGTT 39


>AY705399-1|AAU12508.1|  533|Anopheles gambiae nicotinic
           acetylcholine receptor subunitalpha 5 protein.
          Length = 533

 Score = 23.0 bits (47), Expect = 9.5
 Identities = 7/31 (22%), Positives = 16/31 (51%)
 Frame = -3

Query: 606 HQIGNLEQSCSWRTLLFVYQTGCVHQPANPG 514
           H+  +  +   W  ++F+Y   C+ + + PG
Sbjct: 335 HRNADTHEMSDWVRVIFLYWLPCILRMSRPG 365


>AF020870-1|AAC31873.1|  692|Anopheles gambiae hexamerin A protein.
          Length = 692

 Score = 23.0 bits (47), Expect = 9.5
 Identities = 13/48 (27%), Positives = 22/48 (45%)
 Frame = +3

Query: 516 QGWLAGVHTQFDTQKAKFSKNNFALGYQSGDFALHTNVDNGKDFGGSI 659
           +GW +G+  QF      ++   +  GYQ  D      V++G  F  S+
Sbjct: 607 KGWTSGMPMQFYFIITPYTAKTYEQGYQY-DKTFTCGVESGMRFYDSL 653


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 738,098
Number of Sequences: 2352
Number of extensions: 15925
Number of successful extensions: 227
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 226
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 227
length of database: 563,979
effective HSP length: 62
effective length of database: 418,155
effective search space used: 72758970
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)