Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= brS-1097
         (712 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

11_06_0631 - 25656885-25657000,25658591-25658658,25658957-256589...    29   4.8  
01_03_0169 - 13405789-13407504                                         28   8.4  

>11_06_0631 -
           25656885-25657000,25658591-25658658,25658957-25658996,
           25659742-25659820,25659918-25661707,25662030-25662037,
           25662305-25662367,25662504-25662820
          Length = 826

 Score = 28.7 bits (61), Expect = 4.8
 Identities = 18/49 (36%), Positives = 27/49 (55%)
 Frame = -2

Query: 636 LGLELHREATVRVDDASCISLEIMNEMNAAAIVNNRDLFDSLPDVQFLT 490
           L +E+ R+  VR+DDA  +S+ I    + AA V  R L  S   + FL+
Sbjct: 382 LFVEMRRDG-VRIDDAFVLSIVIGGSADLAAFVLGRQLHGSTMRLGFLS 429


>01_03_0169 - 13405789-13407504
          Length = 571

 Score = 27.9 bits (59), Expect = 8.4
 Identities = 11/30 (36%), Positives = 19/30 (63%)
 Frame = -2

Query: 585 CISLEIMNEMNAAAIVNNRDLFDSLPDVQF 496
           C+ L +M    AA ++ +R  F+SLP++ F
Sbjct: 506 CVPLTMMRAPGAAGLMISRAAFESLPELYF 535


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,338,852
Number of Sequences: 37544
Number of extensions: 396301
Number of successful extensions: 1030
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 1010
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1030
length of database: 14,793,348
effective HSP length: 80
effective length of database: 11,789,828
effective search space used: 1839213168
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)