Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= brS-1091
         (384 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY753540-1|AAV28543.1| 3320|Anopheles gambiae SGS3 protein.            22   6.7  
AY753539-1|AAV28542.1| 3318|Anopheles gambiae SGS2 protein.            22   6.7  
AF457552-1|AAL68782.1|  311|Anopheles gambiae D7 protein long fo...    22   6.7  

>AY753540-1|AAV28543.1| 3320|Anopheles gambiae SGS3 protein.
          Length = 3320

 Score = 22.2 bits (45), Expect = 6.7
 Identities = 6/17 (35%), Positives = 13/17 (76%)
 Frame = -3

Query: 364  VILKPNLQHVHRTPYNY 314
            V+++PN +H ++  Y+Y
Sbjct: 2081 VLIQPNSRHAYQRTYHY 2097


>AY753539-1|AAV28542.1| 3318|Anopheles gambiae SGS2 protein.
          Length = 3318

 Score = 22.2 bits (45), Expect = 6.7
 Identities = 6/17 (35%), Positives = 13/17 (76%)
 Frame = -3

Query: 364  VILKPNLQHVHRTPYNY 314
            V+++PN +H ++  Y+Y
Sbjct: 2082 VLIQPNSRHAYQRTYHY 2098


>AF457552-1|AAL68782.1|  311|Anopheles gambiae D7 protein long form
           protein.
          Length = 311

 Score = 22.2 bits (45), Expect = 6.7
 Identities = 8/17 (47%), Positives = 9/17 (52%)
 Frame = +1

Query: 169 ESEELW*CYLECHESKL 219
           + EE W  Y  CHE  L
Sbjct: 26  DPEEAWYVYERCHEDHL 42


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 379,996
Number of Sequences: 2352
Number of extensions: 7334
Number of successful extensions: 8
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8
length of database: 563,979
effective HSP length: 58
effective length of database: 427,563
effective search space used: 29501847
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)